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Basic Information Integrated Annotations
Tag Content
iUUCD ID IUUC-Rno-105851
Ensembl Protein ID ENSRNOP00000004199.5
UniProt Accession D4A8L4; D4A8L4_RAT
Genbank Protein ID ENSRNOP00000004199
Protein Name DDB1 and CUL4-associated factor 6
Genbank Nucleotide ID AABR07021644
Gene Name Dcaf6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000003078.7 ENSRNOT00000004199.7 ENSRNOP00000004199.5
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFACRAID2
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.50e-15 57.1 92 120
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf...sd.tllvsGsdDgti 25
           gH + +++ +f   +d + +vs+s+Dg+i
   Q: 92   GHRANIFSAKFlpcTDdKQIVSCSGDGVI 120
           8************9666**********98 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MSRSGSCPHL LWDVRKRSLG LEDPSRLRSR YLGRREFIQR LKLEATLNVH DGCVNTICWN 60
DTGEYILSGS DDTKLVISNP YSRKVLTTIR SGHRANIFSA KFLPCTDDKQ IVSCSGDGVI 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105851|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GATCGGCCTG TCCCCTCCCT CTCTTCCCCT CCCCACCCCC CGCGGTGGTC TCCCCTTTCC 60
ACCCCAGCCC CAGCAGAGCC ATGTCTCGGA GTGGCTCCTG CCCGCACCTG TTGTGGGACG 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105851|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR000048--IQ_motif_EF-hand-BS
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50096--IQ
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005925--C:focal adhesion
GO:0005634--C:nucleus
GO:0030374--F:ligand-dependent nuclear receptor transcription coactivator activity
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001399 Ailuropoda melanoleuca 88.03 0.00e+00 1483.00
IUUC-Apl-003181 Anas platyrhynchos 89.20 0.00e+00 707.00
IUUC-Aca-004953 Anolis carolinensis 69.16 0.00e+00 1139.00
IUUC-Acl-008211 Aspergillus clavatus 26.89 3.00e-26 114.00
IUUC-Afu-008828 Aspergillus fumigatus 27.30 3.00e-27 117.00
IUUC-Ate-010555 Aspergillus terreus 25.98 2.00e-25 111.00
IUUC-Ame-011314 Astyanax mexicanus 85.47 0.00e+00 664.00
IUUC-Bta-013552 Bos taurus 81.35 0.00e+00 1395.00
IUUC-Cja-019015 Callithrix jacchus 87.82 0.00e+00 1514.00
IUUC-Cfa-021249 Canis familiaris 88.34 0.00e+00 1477.00
IUUC-Cpo-021903 Cavia porcellus 91.33 0.00e+00 976.00
IUUC-Csa-023744 Chlorocebus sabaeus 86.03 0.00e+00 1478.00
IUUC-Cho-024527 Choloepus hoffmanni 72.62 0.00e+00 1103.00
IUUC-Dre-028040 Danio rerio 85.36 0.00e+00 663.00
IUUC-Dno-029777 Dasypus novemcinctus 87.74 0.00e+00 1467.00
IUUC-Dor-030879 Dipodomys ordii 75.00 0.00e+00 1226.00
IUUC-Ete-032607 Echinops telfairi 69.70 0.00e+00 949.00
IUUC-Eca-033396 Equus caballus 91.82 0.00e+00 741.00
IUUC-Eeu-034944 Erinaceus europaeus 60.52 0.00e+00 627.00
IUUC-Fca-036020 Felis catus 83.93 0.00e+00 1374.00
IUUC-Fal-037527 Ficedula albicollis 90.59 0.00e+00 730.00
IUUC-Gmo-039347 Gadus morhua 82.68 0.00e+00 636.00
IUUC-Gga-040564 Gallus gallus 91.04 0.00e+00 736.00
IUUC-Gac-042029 Gasterosteus aculeatus 83.70 0.00e+00 647.00
IUUC-Ggo-045634 Gorilla gorilla 81.61 1.00e-170 593.00
IUUC-Hsa-045743 Homo sapiens 92.83 0.00e+00 829.00
IUUC-Itr-048064 Ictidomys tridecemlineatus 93.69 0.00e+00 769.00
IUUC-Lch-050457 Latimeria chalumnae 71.88 0.00e+00 1189.00
IUUC-Loc-052880 Lepisosteus oculatus 87.22 0.00e+00 664.00
IUUC-Lma-053032 Leptosphaeria maculans 29.45 8.00e-27 116.00
IUUC-Laf-053836 Loxodonta africana 91.52 0.00e+00 801.00
IUUC-Mcc-055749 Macaca mulatta 86.86 0.00e+00 1506.00
IUUC-Mga-059293 Meleagris gallopavo 86.02 0.00e+00 632.00
IUUC-Mmr-060923 Microcebus murinus 88.35 0.00e+00 1495.00
IUUC-Mdo-063056 Monodelphis domestica 73.58 0.00e+00 1228.00
IUUC-Mmu-063121 Mus musculus 96.95 0.00e+00 892.00
IUUC-Mpu-066035 Mustela putorius furo 84.78 0.00e+00 1328.00
IUUC-Mlu-067903 Myotis lucifugus 89.04 0.00e+00 785.00
IUUC-Nfi-068606 Neosartorya fischeri 27.20 9.00e-27 115.00
IUUC-Nle-069415 Nomascus leucogenys 86.52 0.00e+00 1425.00
IUUC-Opr-070809 Ochotona princeps 67.86 6.00e-133 468.00
IUUC-Ont-071470 Oreochromis niloticus 84.46 0.00e+00 645.00
IUUC-Oan-072748 Ornithorhynchus anatinus 94.63 3.00e-130 457.00
IUUC-Ocu-073865 Oryctolagus cuniculus 89.74 0.00e+00 761.00
IUUC-Ola-086755 Oryzias latipes 83.33 0.00e+00 640.00
IUUC-Oga-088309 Otolemur garnettii 82.23 0.00e+00 1397.00
IUUC-Oar-090264 Ovis aries 89.17 0.00e+00 1481.00
IUUC-Ptr-090603 Pan troglodytes 86.97 0.00e+00 1498.00
IUUC-Pan-092480 Papio anubis 92.61 0.00e+00 832.00
IUUC-Psi-092973 Pelodiscus sinensis 71.46 2.00e-134 473.00
IUUC-Pfo-096506 Poecilia formosa 83.90 0.00e+00 641.00
IUUC-Pab-097581 Pongo abelii 74.89 0.00e+00 1226.00
IUUC-Pca-100155 Procavia capensis 70.48 0.00e+00 1179.00
IUUC-Pva-103022 Pteropus vampyrus 83.68 0.00e+00 1325.00
IUUC-Pte-104187 Pyrenophora teres 29.53 6.00e-28 120.00
IUUC-Pyt-104546 Pyrenophora triticirepentis 29.53 1.00e-26 115.00
IUUC-Sha-106790 Sarcophilus harrisii 82.06 0.00e+00 758.00
IUUC-Sja-107779 Schizosaccharomyces japonicus 32.27 7.00e-35 142.00
IUUC-Spo-108129 Schizosaccharomyces pombe 31.19 9.00e-33 135.00
IUUC-Ssc-115801 Sus scrofa 73.55 4.00e-106 377.00
IUUC-Tgu-116760 Taeniopygia guttata 89.15 0.00e+00 675.00
IUUC-Tru-118422 Takifugu rubripes 64.58 0.00e+00 699.00
IUUC-Tni-120340 Tetraodon nigroviridis 83.80 0.00e+00 640.00
IUUC-Tbe-127997 Tupaia belangeri 71.40 0.00e+00 1060.00
IUUC-Ttr-129311 Tursiops truncatus 83.54 0.00e+00 1361.00
IUUC-Vpa-130145 Vicugna pacos 87.92 0.00e+00 1377.00
IUUC-Xtr-132496 Xenopus tropicalis 83.38 0.00e+00 662.00
IUUC-Xma-133610 Xiphophorus maculatus 84.75 0.00e+00 643.00
Created Date 25-Jun-2017

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