iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gga-040431

Ensembl Protein ID

ENSGALP00000024077.3

UniProt Accession

Q8AWW1; Q8AWW1_CHICK

Genbank Protein ID

AAM80560.1

Protein Name

DNA polymerase kappa

Genbank Nucleotide ID

AC215888

Gene Name

POLK; DINB1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000014956.5	ENSGALT00000024123.3	ENSGALP00000024077.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/ZnF/UBZ	8.00e-13	48.7	770	795

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/ZnF/UBZ

   S: 2    lvCPvC...qkmvdqtdfeeHlDeCl 24
           lvCPvC   qk++++  f++H+D Cl
   Q: 770  LVCPVCnleQKTTSLMSFNRHVDVCL 795
           79****999999*************8 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MDNVKNVDKS SYNGGALLRM GLNDNKAGMQ GLDKEKINKI IMEASKGSKF YENELKKDQQ 60
VNQRIEKMMQ LKEKITQQQL LKAQLQVDKL VLELERSRNL SCTIVHIDMD AFYAAVEMRD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTACAAGGA AATAAAGAGG TAAGGAGCTT GTTAAAGTTG ACCCTGTCAG CCAGAATGTT 60
TCATTGCCAA ATGAGTACTC AGTAAAGACA GGTGTGGCGA AGACTTTCCG TGATGGAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR017061--DNA_pol_eta/kappa
IPR017961--DNA_pol_Y-fam_little_finger
IPR022880--DNApol_IV
IPR024728--PolY_HhH_motif
IPR001126--UmuC
IPR006642--Znf_Rad18_put

PROSITE

PS50173--UMUC

Pfam

PF00817--IMS
PF11799--IMS_C
PF11798--IMS_HHH

SMART

SM00734--ZnF_Rad18

Gene Ontology

GO:0016604--C:nuclear body
GO:0005654--C:nucleoplasm
GO:0003684--F:damaged DNA binding
GO:0034061--F:DNA polymerase activity
GO:0003887--F:DNA-directed DNA polymerase activity
GO:0006297--P:nucleotide-excision repair, DNA gap filling
GO:0019985--P:translesion synthesis

KEGG

gga:374003

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001908	Ailuropoda melanoleuca	57.00	0.00e+00	884.00
IUUC-Apl-003228	Anas platyrhynchos	83.45	0.00e+00	1367.00
IUUC-Aca-005080	Anolis carolinensis	58.97	0.00e+00	931.00
IUUC-Acl-008010	Aspergillus clavatus	27.27	1.00e-19	91.30
IUUC-Afl-008688	Aspergillus flavus	37.15	6.00e-35	141.00
IUUC-Afu-008792	Aspergillus fumigatus	30.90	6.00e-47	182.00
IUUC-Aor-010225	Aspergillus oryzae	43.18	3.00e-42	166.00
IUUC-Ate-010413	Aspergillus terreus	29.04	3.00e-16	80.10
IUUC-Ame-011889	Astyanax mexicanus	52.07	0.00e+00	701.00
IUUC-Bta-013127	Bos taurus	56.43	0.00e+00	898.00
IUUC-Bra-017144	Brassica rapa	52.36	3.00e-56	213.00
IUUC-Cel-018629	Caenorhabditis elegans	43.50	8.00e-99	353.00
IUUC-Cja-019598	Callithrix jacchus	55.57	0.00e+00	847.00
IUUC-Cfa-020661	Canis familiaris	57.17	0.00e+00	890.00
IUUC-Cpo-022040	Cavia porcellus	53.68	0.00e+00	814.00
IUUC-Csa-023669	Chlorocebus sabaeus	58.36	0.00e+00	858.00
IUUC-Cho-024910	Choloepus hoffmanni	42.76	2.00e-106	380.00
IUUC-Csv-026293	Ciona savignyi	52.88	2.00e-135	476.00
IUUC-Cgl-026717	Colletotrichum gloeosporioides	29.59	2.00e-20	93.60
IUUC-Dre-028317	Danio rerio	49.01	0.00e+00	731.00
IUUC-Dno-029973	Dasypus novemcinctus	56.87	0.00e+00	890.00
IUUC-Dor-030667	Dipodomys ordii	56.50	0.00e+00	884.00
IUUC-Dse-031339	Dothistroma septosporum	47.29	8.00e-49	188.00
IUUC-Ete-033030	Echinops telfairi	56.50	0.00e+00	867.00
IUUC-Eca-033959	Equus caballus	56.13	0.00e+00	902.00
IUUC-Fca-036160	Felis catus	55.63	0.00e+00	847.00
IUUC-Fal-037116	Ficedula albicollis	78.87	0.00e+00	1291.00
IUUC-Gmo-039003	Gadus morhua	50.49	0.00e+00	709.00
IUUC-Gac-042455	Gasterosteus aculeatus	50.42	0.00e+00	692.00
IUUC-Gma-043303	Glycine max	35.62	8.00e-73	268.00
IUUC-Ggo-045024	Gorilla gorilla	55.36	0.00e+00	857.00
IUUC-Hsa-046294	Homo sapiens	56.63	0.00e+00	880.00
IUUC-Itr-048670	Ictidomys tridecemlineatus	56.60	0.00e+00	858.00
IUUC-Lch-050251	Latimeria chalumnae	51.13	0.00e+00	755.00
IUUC-Loc-051939	Lepisosteus oculatus	58.25	0.00e+00	699.00
IUUC-Lma-053204	Leptosphaeria maculans	28.00	1.00e-22	101.00
IUUC-Laf-054562	Loxodonta africana	54.00	0.00e+00	838.00
IUUC-Mcc-055653	Macaca mulatta	56.64	0.00e+00	867.00
IUUC-Meu-055994	Macropus eugenii	66.30	9.00e-123	434.00
IUUC-Mga-059228	Meleagris gallopavo	75.91	0.00e+00	1211.00
IUUC-Mvi-060383	Microbotryum violaceum	35.85	1.00e-40	161.00
IUUC-Mmr-061202	Microcebus murinus	57.76	0.00e+00	908.00
IUUC-Mdo-062829	Monodelphis domestica	57.45	0.00e+00	869.00
IUUC-Mmu-063675	Mus musculus	55.76	0.00e+00	868.00
IUUC-Mpu-066825	Mustela putorius furo	56.92	0.00e+00	883.00
IUUC-Mlu-067316	Myotis lucifugus	57.22	0.00e+00	904.00
IUUC-Nle-069272	Nomascus leucogenys	56.64	0.00e+00	876.00
IUUC-Opr-070616	Ochotona princeps	55.51	0.00e+00	853.00
IUUC-Ont-072011	Oreochromis niloticus	56.06	0.00e+00	659.00
IUUC-Oan-073343	Ornithorhynchus anatinus	56.28	0.00e+00	865.00
IUUC-Ocu-073766	Oryctolagus cuniculus	55.68	0.00e+00	780.00
IUUC-Ogl-077190	Oryza glaberrima	43.61	1.00e-46	181.00
IUUC-Ogu-078415	Oryza glumaepatula	52.20	3.00e-52	199.00
IUUC-Osa-085963	Oryza sativa	43.61	1.00e-46	181.00
IUUC-Ola-087034	Oryzias latipes	50.67	0.00e+00	683.00
IUUC-Oga-088157	Otolemur garnettii	55.54	0.00e+00	868.00
IUUC-Oar-089218	Ovis aries	55.90	0.00e+00	901.00
IUUC-Ptr-091552	Pan troglodytes	56.68	0.00e+00	881.00
IUUC-Pan-092646	Papio anubis	55.66	0.00e+00	842.00
IUUC-Psi-093608	Pelodiscus sinensis	65.30	0.00e+00	1069.00
IUUC-Pma-094381	Petromyzon marinus	61.76	0.00e+00	629.00
IUUC-Pno-095081	Phaeosphaeria nodorum	37.07	2.00e-42	166.00
IUUC-Pfo-096545	Poecilia formosa	51.83	0.00e+00	732.00
IUUC-Pab-097613	Pongo abelii	51.87	0.00e+00	811.00
IUUC-Pca-101071	Procavia capensis	71.78	2.00e-59	223.00
IUUC-Pva-102252	Pteropus vampyrus	56.08	0.00e+00	885.00
IUUC-Pgr-103567	Puccinia graminis	39.43	7.00e-42	165.00
IUUC-Ptt-103934	Puccinia triticina	33.60	5.00e-28	119.00
IUUC-Rno-105793	Rattus norvegicus	55.80	0.00e+00	813.00
IUUC-Sha-107230	Sarcophilus harrisii	58.99	0.00e+00	910.00
IUUC-Spo-108028	Schizosaccharomyces pombe	32.80	8.00e-59	221.00
IUUC-Sly-111390	Solanum lycopersicum	41.75	5.00e-89	322.00
IUUC-Stu-112284	Solanum tuberosum	54.45	7.00e-58	218.00
IUUC-Sar-113594	Sorex araneus	52.35	0.00e+00	781.00
IUUC-Sre-115078	Sporisorium reilianum	33.42	4.00e-46	179.00
IUUC-Ssc-116013	Sus scrofa	56.10	0.00e+00	895.00
IUUC-Tgu-117442	Taeniopygia guttata	78.14	0.00e+00	1268.00
IUUC-Tru-117935	Takifugu rubripes	57.35	0.00e+00	639.00
IUUC-Tsy-119489	Tarsius syrichta	40.39	4.00e-99	355.00
IUUC-Tni-120543	Tetraodon nigroviridis	57.28	1.00e-180	625.00
IUUC-Tvi-122417	Trichoderma virens	27.61	3.00e-19	89.70
IUUC-Tbe-128112	Tupaia belangeri	74.66	4.00e-123	435.00
IUUC-Ttr-128371	Tursiops truncatus	52.35	0.00e+00	780.00
IUUC-Uma-129377	Ustilago maydis	41.03	6.00e-46	178.00
IUUC-Vpa-130243	Vicugna pacos	57.82	0.00e+00	905.00
IUUC-Xtr-132453	Xenopus tropicalis	60.57	0.00e+00	739.00
IUUC-Xma-133255	Xiphophorus maculatus	58.17	0.00e+00	717.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence