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Tag Content
UUCD2 ID IUUC-Cpo-021580
UUCD1 version UUC-CaP-00209
Ensembl Protein ID ENSCPOP00000004046.2
UniProt Accession H0V391; H0V391_CAVPO
Genbank Protein ID ENSCPOP00000004046
Protein Name Uncharacterized protein
Genbank Nucleotide ID AAKN02028604
Gene Name SNRNP40
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCPOG00000004486.3 ENSCPOT00000004535.2 ENSCPOP00000004046.2
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.40e-46 154.4 150 184
UBD/Beta-Prp 1.10e-79 267.8 63 266
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 150  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 184
           8*******9659955588999***********876 PP
   

   UBD/Beta-Prp
   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p+g++l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 63   LSGHEGEVYCCKFHPNGSTLASAGFDRLILLWNVYgDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 150
           7*******************************8765999*********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  +t++gh d
   Q: 151  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAIQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 237
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s ++D+++r+Wd+r
   Q: 238  SVTGLSLSSEGSYLLSNAMDNTVRVWDVR 266
           ***************************97 PP
   
Organism Cavia porcellus
Protein Sequence
(Fasta)
MIEQAKRKAP ELPLVPVKRQ RHELQLAAAG SGPGTGQQQA APGALLQAGP PRCSSLQAPI 60
MLLSGHEGEV YCCKFHPNGS TLASAGFDRL ILLWNVYGDC DNYATLKGHS GAVMELHYNT 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Cpo-021580|E3,WD_repeat;UBD,Beta-Prp|Cavia porcellus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGATAGAAC AGGCGAAGCG CAAGGCCCCG GAGTTGCCAC TGGTTCCAGT TAAGCGGCAG 60
CGTCATGAGT TGCAACTGGC AGCGGCGGGC TCAGGCCCCG GAACGGGGCA GCAGCAGGCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Cpo-021580|E3,WD_repeat;UBD,Beta-Prp|Cavia porcellus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0003723--F:RNA binding
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000138 Aegilops tauschii 56.68 2.00e-121 428.00
IUUC-Aml-001428 Ailuropoda melanoleuca 95.61 5.00e-180 623.00
IUUC-Atr-003164 Amborella trichopoda 58.99 6.00e-122 430.00
IUUC-Apl-003447 Anas platyrhynchos 97.21 1.00e-162 565.00
IUUC-Aca-004270 Anolis carolinensis 84.44 2.00e-169 588.00
IUUC-Aly-005659 Arabidopsis lyrata 59.58 9.00e-125 439.00
IUUC-Ath-006764 Arabidopsis thaliana 58.98 2.00e-124 438.00
IUUC-Acl-008324 Aspergillus clavatus 47.37 2.00e-95 342.00
IUUC-Afl-008607 Aspergillus flavus 49.66 1.00e-89 322.00
IUUC-Afu-008998 Aspergillus fumigatus 47.08 4.00e-95 341.00
IUUC-Ani-009363 Aspergillus nidulans 49.05 1.00e-95 342.00
IUUC-Ang-009513 Aspergillus niger 48.51 4.00e-85 307.00
IUUC-Aor-010237 Aspergillus oryzae 47.95 3.00e-96 345.00
IUUC-Ate-010374 Aspergillus terreus 46.20 2.00e-83 302.00
IUUC-Ame-010728 Astyanax mexicanus 83.89 1.00e-171 595.00
IUUC-Bgr-012297 Blumeria graminis 46.15 2.00e-70 258.00
IUUC-Bta-012433 Bos taurus 98.60 0.00e+00 652.00
IUUC-Bci-013763 Botrytis cinerea 48.69 2.00e-95 342.00
IUUC-Bdi-014490 Brachypodium distachyon 57.31 2.00e-120 425.00
IUUC-Bol-016479 Brassica oleracea 60.44 1.00e-124 439.00
IUUC-Bra-017219 Brassica rapa 62.14 2.00e-124 438.00
IUUC-Cel-018512 Caenorhabditis elegans 56.35 3.00e-114 404.00
IUUC-Cja-019308 Callithrix jacchus 97.49 0.00e+00 654.00
IUUC-Cfa-020998 Canis familiaris 98.32 0.00e+00 658.00
IUUC-Cre-022859 Chlamydomonas reinhardtii 53.37 8.00e-108 383.00
IUUC-Csa-023456 Chlorocebus sabaeus 95.25 0.00e+00 653.00
IUUC-Cho-024644 Choloepus hoffmanni 99.68 7.00e-180 622.00
IUUC-Cin-025463 Ciona intestinalis 59.71 3.00e-128 451.00
IUUC-Cgl-026497 Colletotrichum gloeosporioides 45.66 4.00e-95 341.00
IUUC-Cne-026780 Cryptococcus neoformans 39.77 1.00e-67 249.00
IUUC-Dre-027671 Danio rerio 81.84 4.00e-177 613.00
IUUC-Dno-029769 Dasypus novemcinctus 97.49 0.00e+00 661.00
IUUC-Dor-030776 Dipodomys ordii 95.51 4.00e-85 307.00
IUUC-Dse-031316 Dothistroma septosporum 43.70 3.00e-87 315.00
IUUC-Dme-031756 Drosophila melanogaster 61.78 6.00e-125 440.00
IUUC-Ete-032753 Echinops telfairi 88.55 1.00e-163 568.00
IUUC-Eca-033979 Equus caballus 98.32 0.00e+00 652.00
IUUC-Eeu-034862 Erinaceus europaeus 100.00 2.00e-72 266.00
IUUC-Fca-036110 Felis catus 98.05 2.00e-159 554.00
IUUC-Fal-037648 Ficedula albicollis 97.10 6.00e-177 613.00
IUUC-Fox-037861 Fusarium oxysporum 46.28 9.00e-92 330.00
IUUC-Fso-038405 Fusarium solani 46.28 2.00e-91 328.00
IUUC-Gmo-039383 Gadus morhua 84.17 3.00e-173 600.00
IUUC-Ggr-040082 Gaeumannomyces graminis 44.28 4.00e-84 304.00
IUUC-Gga-040785 Gallus gallus 91.14 1.00e-180 625.00
IUUC-Gac-041645 Gasterosteus aculeatus 83.61 1.00e-170 592.00
IUUC-Gma-044329 Glycine max 60.57 3.00e-123 434.00
IUUC-Ggo-044800 Gorilla gorilla 85.71 1.00e-157 548.00
IUUC-Hsa-045918 Homo sapiens 95.25 0.00e+00 653.00
IUUC-Hvu-047342 Hordeum vulgare 56.34 6.00e-121 426.00
IUUC-Itr-048047 Ictidomys tridecemlineatus 96.80 6.00e-112 396.00
IUUC-Kpa-049149 Komagataella pastoris 34.30 1.00e-36 146.00
IUUC-Lch-050395 Latimeria chalumnae 87.19 0.00e+00 655.00
IUUC-Lpe-051275 Leersia perrieri 57.61 2.00e-121 429.00
IUUC-Loc-052666 Lepisosteus oculatus 86.46 1.00e-172 598.00
IUUC-Lma-053129 Leptosphaeria maculans 43.77 1.00e-88 319.00
IUUC-Laf-054512 Loxodonta africana 95.25 0.00e+00 646.00
IUUC-Mcc-055819 Macaca mulatta 95.25 0.00e+00 653.00
IUUC-Meu-056350 Macropus eugenii 81.99 9.00e-159 552.00
IUUC-Mor-057063 Magnaporthe oryzae 46.05 2.00e-92 332.00
IUUC-Mpo-057369 Magnaporthe poae 45.18 5.00e-85 307.00
IUUC-Mtr-058228 Medicago truncatula 57.23 9.00e-123 432.00
IUUC-Mla-059093 Melampsora laricipopulina 40.46 4.00e-70 258.00
IUUC-Mga-059719 Meleagris gallopavo 96.82 1.00e-178 618.00
IUUC-Mvi-060285 Microbotryum violaceum 40.06 1.00e-63 236.00
IUUC-Mmr-061685 Microcebus murinus 91.90 7.00e-171 592.00
IUUC-Mdo-062121 Monodelphis domestica 90.86 0.00e+00 635.00
IUUC-Mmu-063216 Mus musculus 96.93 0.00e+00 663.00
IUUC-Mac-065463 Musa acuminata 53.85 1.00e-110 392.00
IUUC-Mpu-066390 Mustela putorius furo 98.04 0.00e+00 666.00
IUUC-Mlu-066932 Myotis lucifugus 97.95 3.00e-180 624.00
IUUC-Nfi-068509 Neosartorya fischeri 47.08 5.00e-95 340.00
IUUC-Ncr-068870 Neurospora crassa 47.95 6.00e-93 333.00
IUUC-Nle-069539 Nomascus leucogenys 95.25 0.00e+00 652.00
IUUC-Opr-070555 Ochotona princeps 86.31 3.00e-167 580.00
IUUC-Ont-071490 Oreochromis niloticus 83.66 1.00e-170 592.00
IUUC-Oan-073044 Ornithorhynchus anatinus 78.79 3.00e-153 534.00
IUUC-Ocu-073764 Oryctolagus cuniculus 98.60 0.00e+00 668.00
IUUC-Oba-075704 Oryza barthii 58.75 8.00e-121 426.00
IUUC-Obr-076455 Oryza brachyantha 57.91 5.00e-121 427.00
IUUC-Ogl-077382 Oryza glaberrima 57.61 4.00e-121 427.00
IUUC-Ogu-078739 Oryza glumaepatula 58.75 6.00e-121 426.00
IUUC-Oin-079072 Oryza indica 58.75 6.00e-121 426.00
IUUC-Olo-080809 Oryza longistaminata 58.75 6.00e-121 426.00
IUUC-Ome-081677 Oryza meridionalis 58.75 1.00e-120 425.00
IUUC-Oni-082937 Oryza nivara 58.75 6.00e-121 426.00
IUUC-Opu-083510 Oryza punctata 58.75 6.00e-121 426.00
IUUC-Oru-084360 Oryza rufipogon 57.31 7.00e-121 427.00
IUUC-Osa-085640 Oryza sativa 57.31 7.00e-121 426.00
IUUC-Ola-086504 Oryzias latipes 82.50 2.00e-171 594.00
IUUC-Olu-087869 Ostreococcus lucimarinus 41.64 3.00e-63 234.00
IUUC-Oga-088773 Otolemur garnettii 98.04 0.00e+00 656.00
IUUC-Oar-089677 Ovis aries 97.78 0.00e+00 646.00
IUUC-Ptr-090724 Pan troglodytes 95.04 4.00e-180 624.00
IUUC-Pan-092683 Papio anubis 95.25 0.00e+00 653.00
IUUC-Psi-093415 Pelodiscus sinensis 98.05 1.00e-176 612.00
IUUC-Pma-094562 Petromyzon marinus 77.16 4.00e-171 593.00
IUUC-Pno-095014 Phaeosphaeria nodorum 46.97 7.00e-89 320.00
IUUC-Ppa-095728 Physcomitrella patens 57.63 9.00e-123 432.00
IUUC-Pfo-096579 Poecilia formosa 82.68 7.00e-169 586.00
IUUC-Pab-098313 Pongo abelii 95.25 0.00e+00 653.00
IUUC-Pop-099747 Populus trichocarpa 60.31 4.00e-124 437.00
IUUC-Pca-100871 Procavia capensis 85.36 3.00e-130 457.00
IUUC-Ppe-101389 Prunus persica 59.17 4.00e-125 440.00
IUUC-Pva-102468 Pteropus vampyrus 84.36 1.00e-149 522.00
IUUC-Pgr-103523 Puccinia graminis 40.28 7.00e-74 270.00
IUUC-Ptt-103930 Puccinia triticina 38.80 5.00e-73 268.00
IUUC-Pte-104299 Pyrenophora teres 46.78 6.00e-95 340.00
IUUC-Pyt-104564 Pyrenophora triticirepentis 47.37 6.00e-95 340.00
IUUC-Rno-105796 Rattus norvegicus 97.49 0.00e+00 655.00
IUUC-Sha-107191 Sarcophilus harrisii 91.14 0.00e+00 635.00
IUUC-Sja-107952 Schizosaccharomyces japonicus 38.26 8.00e-64 237.00
IUUC-Spo-108249 Schizosaccharomyces pombe 43.81 2.00e-80 292.00
IUUC-Ssl-108448 Sclerotinia sclerotiorum 49.84 1.00e-94 339.00
IUUC-Sit-110805 Setaria italica 56.72 3.00e-120 425.00
IUUC-Sly-111567 Solanum lycopersicum 61.51 1.00e-125 442.00
IUUC-Stu-112562 Solanum tuberosum 61.32 1.00e-126 446.00
IUUC-Sar-112991 Sorex araneus 98.63 1.00e-120 425.00
IUUC-Sbi-114010 Sorghum bicolor 58.04 3.00e-119 421.00
IUUC-Sre-114947 Sporisorium reilianum 42.99 5.00e-74 271.00
IUUC-Ssc-115371 Sus scrofa 98.60 0.00e+00 652.00
IUUC-Tgu-117429 Taeniopygia guttata 94.46 6.00e-175 606.00
IUUC-Tru-118081 Takifugu rubripes 83.61 9.00e-174 602.00
IUUC-Tsy-119101 Tarsius syrichta 86.87 7.00e-161 559.00
IUUC-Tni-120532 Tetraodon nigroviridis 83.61 2.00e-170 591.00
IUUC-Tca-121373 Theobroma cacao 61.20 2.00e-125 441.00
IUUC-Tre-122050 Trichoderma reesei 45.63 2.00e-90 325.00
IUUC-Tvi-122394 Trichoderma virens 44.82 1.00e-84 306.00
IUUC-Tae-124661 Triticum aestivum 56.47 9.00e-121 426.00
IUUC-Tme-126998 Tuber melanosporum 51.46 4.00e-94 338.00
IUUC-Tbe-128032 Tupaia belangeri 97.77 0.00e+00 657.00
IUUC-Ttr-129102 Tursiops truncatus 87.99 2.00e-159 554.00
IUUC-Uma-129363 Ustilago maydis 43.61 1.00e-77 283.00
IUUC-Vda-129891 Verticillium dahliae 49.21 2.00e-93 335.00
IUUC-Vpa-130827 Vicugna pacos 97.77 0.00e+00 649.00
IUUC-Vvi-131202 Vitis vinifera 58.75 3.00e-124 437.00
IUUC-Xtr-132769 Xenopus tropicalis 85.56 3.00e-170 590.00
IUUC-Xma-133147 Xiphophorus maculatus 82.68 1.00e-168 585.00
IUUC-Yli-134352 Yarrowia lipolytica 33.77 3.00e-36 145.00
IUUC-Zma-135294 Zea mays 58.04 5.00e-119 420.00
Created Date 25-Jun-2017

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