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Tag Content
UUCD2 ID IUUC-Dre-027671
UUCD1 version UUC-DaR-01297
Ensembl Protein ID ENSDARP00000038728.7
UniProt Accession Q7ZTY9; Q7ZTY9_DANRE
Genbank Protein ID AAH51783.1
Protein Name Small nuclear ribonucleoprotein 40 (U5)
Genbank Nucleotide ID CU207343
Gene Name snrnp40
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000023160.7 ENSDART00000038230.7 ENSDARP00000038728.7
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.40e-43 145.8 139 174
UBD/Beta-Prp 4.70e-64 217.3 51 255
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf...sd.tllvsGsdDgtikvWDlrtg 33
           gHt+ v+++ f    +  l ++GsdDgt+k+WD+r+ 
   Q: 139  GHTSFVNSC-FparRGpQLACTGSDDGTVKLWDIRKK 174
           8*******8.99*955477888***********9876 PP
   

   UBD/Beta-Prp
   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetls 134
            lsghe+ev+++kf+p+g +l++++ Dr+i  w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+
   Q: 51   LLSGHEGEVYCCKFHPNGATLASSGYDRLILMWNVYgDCENYATLKGHSGAVMELHYNTDGSLLFSASTDKTVCVWDSETGERVK-RLK 138
           58*******************************87659999********************************************.*** PP
   S: 135  ghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnght 222
           gh+++vn+      g +l  +Gs+D+tv+lWd++ +  ++t++  +t +v s++f++++ +++sg+ d+++k+wdl++++ +++++gh 
   Q: 139  GHTSFVNSCFPARRGpQLACTGSDDGTVKLWDIRKKASVHTFQ--NTYQVLSVTFNDTSDQIISGGIDNDIKVWDLRQNKLIYSMQGHG 225
           ******************************************7..6******************************************* PP
   S: 223  dnvksvrfspnderlvsgssDgsiriWdlr 252
           d v+ + +s ++ +l+s s+D+s+r+Wd+r
   Q: 226  DSVTGLSLSADGSYLLSNSMDNSVRVWDIR 255
           ****************************98 PP
   
Organism Danio rerio
Protein Sequence
(Fasta)
MIEPKKRVAD MAVVPVGVKR PRTELVAAAQ SQQLSAMGPP RSSSLQAPIM LLSGHEGEVY 60
CCKFHPNGAT LASSGYDRLI LMWNVYGDCE NYATLKGHSG AVMELHYNTD GSLLFSASTD 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Dre-027671|E3,WD_repeat;UBD,Beta-Prp|Danio rerio
Please wait for a moment...
Nucleotide Sequence
(Fasta)
AATCACATCG CTTCTTGTTA CCGGACGTGT TTCACTCGAC GAGCGTGTGT AGCTCAAAGG 60
TGGAGGGTAG CTCGAAAAAC TCATTCATTG AAAATAAGCG GATATTTTGA CATACTGTTC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Dre-027671|E3,WD_repeat;UBD,Beta-Prp|Danio rerio
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0687--Ribonucleoprotein
KW-0543--Viral nucleoprotein
KW-0946--Virion
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0071011--C:precatalytic spliceosome
GO:0005682--C:U5 snRNP
GO:0019013--C:viral nucleocapsid
GO:0008380--P:RNA splicing
KEGG dre:393292
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000138 Aegilops tauschii 54.01 1.00e-116 413.00
IUUC-Aml-001428 Ailuropoda melanoleuca 81.34 2.00e-159 555.00
IUUC-Atr-003164 Amborella trichopoda 58.41 2.00e-119 422.00
IUUC-Apl-003447 Anas platyrhynchos 88.85 1.00e-152 531.00
IUUC-Aca-004270 Anolis carolinensis 75.28 8.00e-162 563.00
IUUC-Aly-005659 Arabidopsis lyrata 58.26 1.00e-120 426.00
IUUC-Ath-006764 Arabidopsis thaliana 58.26 8.00e-121 426.00
IUUC-Acl-008324 Aspergillus clavatus 48.05 6.00e-91 327.00
IUUC-Afl-008607 Aspergillus flavus 48.66 6.00e-87 313.00
IUUC-Afu-008998 Aspergillus fumigatus 45.86 5.00e-92 330.00
IUUC-Ani-009363 Aspergillus nidulans 47.73 4.00e-92 331.00
IUUC-Ang-009513 Aspergillus niger 47.19 1.00e-82 300.00
IUUC-Aor-010237 Aspergillus oryzae 47.69 2.00e-92 332.00
IUUC-Ate-010374 Aspergillus terreus 43.87 3.00e-80 291.00
IUUC-Ame-010728 Astyanax mexicanus 93.66 0.00e+00 666.00
IUUC-Bgr-012297 Blumeria graminis 47.79 1.00e-71 263.00
IUUC-Bta-012433 Bos taurus 80.56 8.00e-166 576.00
IUUC-Bci-013763 Botrytis cinerea 49.51 7.00e-92 330.00
IUUC-Bdi-014490 Brachypodium distachyon 54.35 2.00e-116 412.00
IUUC-Bol-016479 Brassica oleracea 58.59 2.00e-121 428.00
IUUC-Bra-017219 Brassica rapa 56.05 8.00e-121 427.00
IUUC-Cel-018512 Caenorhabditis elegans 55.83 3.00e-111 394.00
IUUC-Cja-019308 Callithrix jacchus 80.83 8.00e-168 582.00
IUUC-Cfa-020998 Canis familiaris 81.11 1.00e-167 582.00
IUUC-Cpo-021580 Cavia porcellus 81.67 8.00e-167 579.00
IUUC-Cre-022859 Chlamydomonas reinhardtii 54.66 4.00e-108 384.00
IUUC-Csa-023456 Chlorocebus sabaeus 81.06 2.00e-167 582.00
IUUC-Cho-024644 Choloepus hoffmanni 89.35 4.00e-167 580.00
IUUC-Cin-025463 Ciona intestinalis 59.25 8.00e-128 449.00
IUUC-Cgl-026497 Colletotrichum gloeosporioides 48.54 3.00e-93 335.00
IUUC-Cne-026780 Cryptococcus neoformans 40.51 2.00e-66 246.00
IUUC-Dno-029769 Dasypus novemcinctus 81.62 3.00e-169 587.00
IUUC-Dor-030776 Dipodomys ordii 74.44 4.00e-72 265.00
IUUC-Dse-031316 Dothistroma septosporum 42.34 1.00e-83 303.00
IUUC-Dme-031756 Drosophila melanogaster 56.43 9.00e-123 433.00
IUUC-Ete-032753 Echinops telfairi 75.07 1.00e-143 502.00
IUUC-Eca-033979 Equus caballus 80.56 8.00e-166 576.00
IUUC-Eeu-034862 Erinaceus europaeus 87.05 6.00e-66 244.00
IUUC-Fca-036110 Felis catus 80.65 6.00e-139 486.00
IUUC-Fal-037648 Ficedula albicollis 89.68 9.00e-167 579.00
IUUC-Fox-037861 Fusarium oxysporum 46.28 5.00e-91 327.00
IUUC-Fso-038405 Fusarium solani 45.95 9.00e-91 327.00
IUUC-Gmo-039383 Gadus morhua 89.91 0.00e+00 648.00
IUUC-Ggr-040082 Gaeumannomyces graminis 43.22 2.00e-81 295.00
IUUC-Gga-040785 Gallus gallus 83.43 1.00e-168 585.00
IUUC-Gac-041645 Gasterosteus aculeatus 90.78 0.00e+00 632.00
IUUC-Gma-044329 Glycine max 55.82 7.00e-119 420.00
IUUC-Ggo-044800 Gorilla gorilla 72.33 2.00e-136 478.00
IUUC-Hsa-045918 Homo sapiens 81.06 2.00e-167 582.00
IUUC-Hvu-047342 Hordeum vulgare 54.03 4.00e-116 411.00
IUUC-Itr-048047 Ictidomys tridecemlineatus 77.38 1.00e-95 342.00
IUUC-Kpa-049149 Komagataella pastoris 34.95 7.00e-37 147.00
IUUC-Lch-050395 Latimeria chalumnae 84.57 0.00e+00 632.00
IUUC-Lpe-051275 Leersia perrieri 54.65 1.00e-117 416.00
IUUC-Loc-052666 Lepisosteus oculatus 89.17 7.00e-179 619.00
IUUC-Lma-053129 Leptosphaeria maculans 44.55 1.00e-85 309.00
IUUC-Laf-054512 Loxodonta africana 80.95 1.00e-165 575.00
IUUC-Mcc-055819 Macaca mulatta 81.06 2.00e-167 582.00
IUUC-Meu-056350 Macropus eugenii 71.35 9.00e-141 493.00
IUUC-Mor-057063 Magnaporthe oryzae 48.22 5.00e-91 327.00
IUUC-Mpo-057369 Magnaporthe poae 46.28 3.00e-81 295.00
IUUC-Mtr-058228 Medicago truncatula 58.58 1.00e-118 419.00
IUUC-Mla-059093 Melampsora laricipopulina 41.69 3.00e-67 249.00
IUUC-Mga-059719 Meleagris gallopavo 88.01 2.00e-167 581.00
IUUC-Mvi-060285 Microbotryum violaceum 40.00 2.00e-62 233.00
IUUC-Mmr-061685 Microcebus murinus 75.56 5.00e-149 520.00
IUUC-Mdo-062121 Monodelphis domestica 79.61 2.00e-164 572.00
IUUC-Mmu-063216 Mus musculus 81.67 1.00e-169 588.00
IUUC-Mac-065463 Musa acuminata 53.51 3.00e-109 387.00
IUUC-Mpu-066390 Mustela putorius furo 81.39 1.00e-168 585.00
IUUC-Mlu-066932 Myotis lucifugus 80.81 3.00e-158 551.00
IUUC-Nfi-068509 Neosartorya fischeri 46.77 3.00e-92 331.00
IUUC-Ncr-068870 Neurospora crassa 45.95 2.00e-91 328.00
IUUC-Nle-069539 Nomascus leucogenys 81.06 2.00e-167 582.00
IUUC-Opr-070555 Ochotona princeps 71.11 5.00e-147 513.00
IUUC-Ont-071490 Oreochromis niloticus 90.06 0.00e+00 640.00
IUUC-Oan-073044 Ornithorhynchus anatinus 71.78 4.00e-141 494.00
IUUC-Ocu-073764 Oryctolagus cuniculus 81.11 7.00e-169 586.00
IUUC-Oba-075704 Oryza barthii 56.01 2.00e-116 412.00
IUUC-Obr-076455 Oryza brachyantha 54.95 2.00e-117 416.00
IUUC-Ogl-077382 Oryza glaberrima 55.62 1.00e-117 416.00
IUUC-Ogu-078739 Oryza glumaepatula 56.01 2.00e-116 412.00
IUUC-Oin-079072 Oryza indica 56.01 2.00e-116 412.00
IUUC-Olo-080809 Oryza longistaminata 56.01 2.00e-116 412.00
IUUC-Ome-081677 Oryza meridionalis 56.01 4.00e-116 410.00
IUUC-Oni-082937 Oryza nivara 56.01 2.00e-116 412.00
IUUC-Opu-083510 Oryza punctata 56.01 2.00e-116 412.00
IUUC-Oru-084360 Oryza rufipogon 55.32 2.00e-117 415.00
IUUC-Osa-085640 Oryza sativa 55.32 2.00e-117 415.00
IUUC-Ola-086504 Oryzias latipes 83.99 3.00e-177 614.00
IUUC-Olu-087869 Ostreococcus lucimarinus 40.33 4.00e-63 234.00
IUUC-Oga-088773 Otolemur garnettii 80.83 4.00e-167 580.00
IUUC-Oar-089677 Ovis aries 79.89 3.00e-164 570.00
IUUC-Ptr-090724 Pan troglodytes 80.40 5.00e-160 557.00
IUUC-Pan-092683 Papio anubis 81.06 2.00e-167 582.00
IUUC-Psi-093415 Pelodiscus sinensis 90.23 8.00e-166 576.00
IUUC-Pma-094562 Petromyzon marinus 79.94 1.00e-172 598.00
IUUC-Pno-095014 Phaeosphaeria nodorum 46.78 4.00e-85 308.00
IUUC-Ppa-095728 Physcomitrella patens 56.65 3.00e-120 424.00
IUUC-Pfo-096579 Poecilia formosa 89.34 2.00e-179 621.00
IUUC-Pab-098313 Pongo abelii 81.06 2.00e-167 582.00
IUUC-Pop-099747 Populus trichocarpa 55.36 1.00e-119 422.00
IUUC-Pca-100871 Procavia capensis 75.71 4.00e-120 424.00
IUUC-Ppe-101389 Prunus persica 59.55 2.00e-120 425.00
IUUC-Pva-102468 Pteropus vampyrus 67.22 4.00e-128 451.00
IUUC-Pgr-103523 Puccinia graminis 41.38 3.00e-72 265.00
IUUC-Ptt-103930 Puccinia triticina 41.69 2.00e-72 266.00
IUUC-Pte-104299 Pyrenophora teres 46.43 1.00e-88 320.00
IUUC-Pyt-104564 Pyrenophora triticirepentis 46.91 5.00e-89 321.00
IUUC-Rno-105796 Rattus norvegicus 81.39 1.00e-168 585.00
IUUC-Sha-107191 Sarcophilus harrisii 79.34 2.00e-164 572.00
IUUC-Sja-107952 Schizosaccharomyces japonicus 37.54 2.00e-62 232.00
IUUC-Spo-108249 Schizosaccharomyces pombe 42.48 4.00e-77 281.00
IUUC-Ssl-108448 Sclerotinia sclerotiorum 48.22 6.00e-91 327.00
IUUC-Sit-110805 Setaria italica 53.75 1.00e-116 412.00
IUUC-Sly-111567 Solanum lycopersicum 59.05 4.00e-121 427.00
IUUC-Stu-112562 Solanum tuberosum 57.78 3.00e-122 431.00
IUUC-Sar-112991 Sorex araneus 88.58 3.00e-112 397.00
IUUC-Sbi-114010 Sorghum bicolor 53.96 1.00e-115 409.00
IUUC-Sre-114947 Sporisorium reilianum 42.06 4.00e-72 265.00
IUUC-Ssc-115371 Sus scrofa 80.56 8.00e-166 576.00
IUUC-Tgu-117429 Taeniopygia guttata 87.30 6.00e-164 570.00
IUUC-Tru-118081 Takifugu rubripes 86.07 1.00e-179 622.00
IUUC-Tsy-119101 Tarsius syrichta 70.56 6.00e-140 490.00
IUUC-Tni-120532 Tetraodon nigroviridis 90.49 0.00e+00 630.00
IUUC-Tca-121373 Theobroma cacao 60.19 1.00e-121 429.00
IUUC-Tre-122050 Trichoderma reesei 46.60 1.00e-90 326.00
IUUC-Tvi-122394 Trichoderma virens 46.76 7.00e-85 307.00
IUUC-Tae-124661 Triticum aestivum 54.46 5.00e-116 410.00
IUUC-Tme-126998 Tuber melanosporum 48.54 5.00e-90 324.00
IUUC-Tbe-128032 Tupaia belangeri 81.11 1.00e-167 582.00
IUUC-Ttr-129102 Tursiops truncatus 72.22 8.00e-140 489.00
IUUC-Uma-129363 Ustilago maydis 42.68 1.00e-75 276.00
IUUC-Vda-129891 Verticillium dahliae 49.19 6.00e-92 330.00
IUUC-Vpa-130827 Vicugna pacos 80.00 8.00e-165 573.00
IUUC-Vvi-131202 Vitis vinifera 57.14 2.00e-120 425.00
IUUC-Xtr-132769 Xenopus tropicalis 79.51 7.00e-165 573.00
IUUC-Xma-133147 Xiphophorus maculatus 89.05 3.00e-179 620.00
IUUC-Yli-134352 Yarrowia lipolytica 34.23 7.00e-39 154.00
IUUC-Zma-135294 Zea mays 55.66 1.00e-114 405.00
Created Date 25-Jun-2017

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