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Tag Content
UUCD2 ID IUUC-Gga-040785
UUCD1 version UUC-GaG-00596
Ensembl Protein ID ENSGALP00000040424.2
UniProt Accession F1NUK8; F1NUK8_CHICK
Genbank Protein ID ENSGALP00000040424
Protein Name Uncharacterized protein
Genbank Nucleotide ID AADN04000335
Gene Name SNRNP40
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGALG00000000615.6 ENSGALT00000041219.2 ENSGALP00000040424.2
ENSGALG00000000615.6 ENSGALT00000083340.1 ENSGALP00000061003.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.10e-45 151.9 177 211
UBD/Beta-Prp 3.20e-63 214.0 90 293
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrt 32
           gHt+ v+++     +  l+++GsdDgt+k+WD+r+
   Q: 177  GHTSFVNSCYParRGpQLVCTGSDDGTVKLWDIRK 211
           8*******9659955588999***********886 PP
   

   UBD/Beta-Prp
   S: 48   lsgheaevtavkfspdgkilvtgseDrtikvwdls.tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsg 135
           lsghe+ev+++kf+p g++l++++ Dr+i +w++  +++   tlkgh+  v+ l+++ +g+ l s+s d+t+ vwd etg+ ++  l+g
   Q: 90   LSGHEGEVYCCKFHPGGNTLASAGFDRLILLWNVYgDCDNYATLKGHSGAVMELHYNTDGSMLFSASTDKTVAVWDSETGERVK-RLKG 177
           8*******************************8765999*********************************************.**** PP
   S: 136  hdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtd 223
           h+++vn+      g +l+ +Gs+D+tv+lWd++ +  ++t++  +t +v  ++f++++ +++sg+ d+++k+wdl++++  +t++gh d
   Q: 178  HTSFVNSCYPARRGpQLVCTGSDDGTVKLWDIRKKAAVQTFQ--NTYQVLAVTFNDTSDQIISGGIDNDIKVWDLRQNKLTYTMRGHAD 264
           *****************************************7..6******************************************** PP
   S: 224  nvksvrfspnderlvsgssDgsiriWdlr 252
            v+ + +s+++ +l+s ++D+++riWd+r
   Q: 265  SVTGLSLSSEGSYLLSNAMDNTVRIWDVR 293
           ***************************97 PP
   
Organism Gallus gallus
Protein Sequence
(Fasta)
MIEQQKRKAP GGPVPGPVPG PAPGPGAGSA PGAAPGPTPG PDLPLVPSAA KRPRHDPPAA 60
GGGGGQPSTG ALLQSGPPRC SSLQAPIMLL SGHEGEVYCC KFHPGGNTLA SAGFDRLILL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Gga-040785|E3,WD_repeat;UBD,Beta-Prp|Gallus gallus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCAGAAGGCC GTGCGGTTGG CCAATGGTGG GCCGGGCGGG CGCGCGCGGC CGGTGGCGAT 60
GATCGAGCAG CAGAAGCGAA AGGCCCCGGG TGGCCCCGTC CCAGGCCCCG TCCCAGGCCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Gga-040785|E3,WD_repeat;UBD,Beta-Prp|Gallus gallus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005829--C:cytosol
GO:0016607--C:nuclear speck
GO:0071011--C:precatalytic spliceosome
GO:0005682--C:U5 snRNP
GO:0003723--F:RNA binding
GO:0008380--P:RNA splicing
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000138 Aegilops tauschii 58.90 6.00e-119 420.00
IUUC-Aml-001428 Ailuropoda melanoleuca 88.96 6.00e-169 586.00
IUUC-Atr-003164 Amborella trichopoda 59.62 3.00e-121 427.00
IUUC-Apl-003447 Anas platyrhynchos 100.00 2.00e-165 574.00
IUUC-Aca-004270 Anolis carolinensis 91.26 4.00e-168 583.00
IUUC-Aly-005659 Arabidopsis lyrata 61.61 2.00e-123 434.00
IUUC-Ath-006764 Arabidopsis thaliana 60.97 5.00e-123 433.00
IUUC-Acl-008324 Aspergillus clavatus 48.42 1.00e-92 332.00
IUUC-Afl-008607 Aspergillus flavus 48.99 4.00e-88 317.00
IUUC-Afu-008998 Aspergillus fumigatus 48.10 3.00e-92 331.00
IUUC-Ani-009363 Aspergillus nidulans 48.10 9.00e-94 336.00
IUUC-Ang-009513 Aspergillus niger 47.85 1.00e-83 303.00
IUUC-Aor-010237 Aspergillus oryzae 49.37 1.00e-93 336.00
IUUC-Ate-010374 Aspergillus terreus 45.25 1.00e-81 296.00
IUUC-Ame-010728 Astyanax mexicanus 84.68 3.00e-170 590.00
IUUC-Bgr-012297 Blumeria graminis 46.52 8.00e-70 256.00
IUUC-Bta-012433 Bos taurus 88.92 1.00e-176 612.00
IUUC-Bci-013763 Botrytis cinerea 50.78 6.00e-95 340.00
IUUC-Bdi-014490 Brachypodium distachyon 58.92 8.00e-119 419.00
IUUC-Bol-016479 Brassica oleracea 61.22 4.00e-123 433.00
IUUC-Bra-017219 Brassica rapa 61.49 6.00e-123 433.00
IUUC-Cel-018512 Caenorhabditis elegans 57.23 1.00e-112 399.00
IUUC-Cja-019308 Callithrix jacchus 88.92 2.00e-177 614.00
IUUC-Cfa-020998 Canis familiaris 89.49 2.00e-178 617.00
IUUC-Cpo-021580 Cavia porcellus 90.91 3.00e-176 610.00
IUUC-Cre-022859 Chlamydomonas reinhardtii 55.10 4.00e-107 380.00
IUUC-Csa-023456 Chlorocebus sabaeus 89.17 3.00e-178 617.00
IUUC-Cho-024644 Choloepus hoffmanni 97.42 6.00e-177 612.00
IUUC-Cin-025463 Ciona intestinalis 59.82 1.00e-126 445.00
IUUC-Cgl-026497 Colletotrichum gloeosporioides 48.43 2.00e-94 338.00
IUUC-Cne-026780 Cryptococcus neoformans 39.89 7.00e-67 247.00
IUUC-Dre-027671 Danio rerio 83.14 2.00e-175 607.00
IUUC-Dno-029769 Dasypus novemcinctus 90.34 0.00e+00 627.00
IUUC-Dor-030776 Dipodomys ordii 82.56 8.00e-77 280.00
IUUC-Dse-031316 Dothistroma septosporum 42.81 3.00e-85 308.00
IUUC-Dme-031756 Drosophila melanogaster 61.78 1.00e-124 438.00
IUUC-Ete-032753 Echinops telfairi 83.38 4.00e-155 540.00
IUUC-Eca-033979 Equus caballus 88.92 1.00e-176 612.00
IUUC-Eeu-034862 Erinaceus europaeus 96.40 1.00e-70 259.00
IUUC-Fca-036110 Felis catus 88.74 4.00e-148 516.00
IUUC-Fal-037648 Ficedula albicollis 96.87 9.00e-179 619.00
IUUC-Fox-037861 Fusarium oxysporum 46.93 1.00e-91 329.00
IUUC-Fso-038405 Fusarium solani 46.93 1.00e-91 329.00
IUUC-Gmo-039383 Gadus morhua 84.88 3.00e-170 590.00
IUUC-Ggr-040082 Gaeumannomyces graminis 43.84 4.00e-83 301.00
IUUC-Gac-041645 Gasterosteus aculeatus 85.47 7.00e-170 589.00
IUUC-Gma-044329 Glycine max 60.65 3.00e-121 427.00
IUUC-Ggo-044800 Gorilla gorilla 80.36 1.00e-146 511.00
IUUC-Hsa-045918 Homo sapiens 89.17 3.00e-178 617.00
IUUC-Hvu-047342 Hordeum vulgare 58.90 2.00e-118 418.00
IUUC-Itr-048047 Ictidomys tridecemlineatus 84.98 7.00e-102 362.00
IUUC-Kpa-049149 Komagataella pastoris 33.98 9.00e-36 143.00
IUUC-Lch-050395 Latimeria chalumnae 86.71 0.00e+00 630.00
IUUC-Lpe-051275 Leersia perrieri 59.24 1.00e-119 422.00
IUUC-Loc-052666 Lepisosteus oculatus 86.74 8.00e-168 582.00
IUUC-Lma-053129 Leptosphaeria maculans 44.94 1.00e-86 312.00
IUUC-Laf-054512 Loxodonta africana 89.68 2.00e-177 614.00
IUUC-Mcc-055819 Macaca mulatta 89.17 2.00e-178 617.00
IUUC-Meu-056350 Macropus eugenii 80.28 4.00e-151 526.00
IUUC-Mor-057063 Magnaporthe oryzae 45.45 2.00e-91 328.00
IUUC-Mpo-057369 Magnaporthe poae 44.70 1.00e-83 303.00
IUUC-Mtr-058228 Medicago truncatula 59.68 1.00e-120 425.00
IUUC-Mla-059093 Melampsora laricipopulina 41.23 3.00e-70 258.00
IUUC-Mga-059719 Meleagris gallopavo 98.73 6.00e-180 622.00
IUUC-Mvi-060285 Microbotryum violaceum 40.12 5.00e-63 234.00
IUUC-Mmr-061685 Microcebus murinus 83.24 7.00e-159 552.00
IUUC-Mdo-062121 Monodelphis domestica 89.30 9.00e-176 608.00
IUUC-Mmu-063216 Mus musculus 90.34 0.00e+00 628.00
IUUC-Mac-065463 Musa acuminata 55.99 1.00e-108 385.00
IUUC-Mpu-066390 Mustela putorius furo 90.06 0.00e+00 625.00
IUUC-Mlu-066932 Myotis lucifugus 88.39 2.00e-167 581.00
IUUC-Nfi-068509 Neosartorya fischeri 48.42 2.00e-92 332.00
IUUC-Ncr-068870 Neurospora crassa 48.59 2.00e-93 335.00
IUUC-Nle-069539 Nomascus leucogenys 89.17 4.00e-178 617.00
IUUC-Opr-070555 Ochotona princeps 77.56 4.00e-156 543.00
IUUC-Ont-071490 Oreochromis niloticus 84.64 3.00e-169 587.00
IUUC-Oan-073044 Ornithorhynchus anatinus 78.15 4.00e-146 510.00
IUUC-Ocu-073764 Oryctolagus cuniculus 90.06 0.00e+00 627.00
IUUC-Oba-075704 Oryza barthii 59.24 1.00e-119 422.00
IUUC-Obr-076455 Oryza brachyantha 59.55 2.00e-119 422.00
IUUC-Ogl-077382 Oryza glaberrima 59.55 9.00e-120 422.00
IUUC-Ogu-078739 Oryza glumaepatula 59.24 1.00e-119 422.00
IUUC-Oin-079072 Oryza indica 59.24 1.00e-119 422.00
IUUC-Olo-080809 Oryza longistaminata 59.24 1.00e-119 422.00
IUUC-Ome-081677 Oryza meridionalis 59.24 3.00e-119 421.00
IUUC-Oni-082937 Oryza nivara 59.24 1.00e-119 422.00
IUUC-Opu-083510 Oryza punctata 59.24 1.00e-119 422.00
IUUC-Oru-084360 Oryza rufipogon 59.24 2.00e-119 422.00
IUUC-Osa-085640 Oryza sativa 59.24 2.00e-119 422.00
IUUC-Ola-086504 Oryzias latipes 83.57 3.00e-170 590.00
IUUC-Olu-087869 Ostreococcus lucimarinus 41.64 1.00e-62 233.00
IUUC-Oga-088773 Otolemur garnettii 89.49 1.00e-178 618.00
IUUC-Oar-089677 Ovis aries 88.17 3.00e-175 607.00
IUUC-Ptr-090724 Pan troglodytes 88.69 4.00e-169 587.00
IUUC-Pan-092683 Papio anubis 89.17 3.00e-178 617.00
IUUC-Psi-093415 Pelodiscus sinensis 99.02 4.00e-176 610.00
IUUC-Pma-094562 Petromyzon marinus 78.49 1.00e-165 575.00
IUUC-Pno-095014 Phaeosphaeria nodorum 48.17 3.00e-87 315.00
IUUC-Ppa-095822 Physcomitrella patens 62.14 1.00e-120 426.00
IUUC-Pfo-096579 Poecilia formosa 84.59 3.00e-169 587.00
IUUC-Pab-098313 Pongo abelii 89.17 3.00e-178 617.00
IUUC-Pop-099747 Populus trichocarpa 61.41 7.00e-124 436.00
IUUC-Pca-100871 Procavia capensis 83.21 7.00e-128 449.00
IUUC-Ppe-101389 Prunus persica 61.94 2.00e-123 434.00
IUUC-Pva-102468 Pteropus vampyrus 75.00 3.00e-138 484.00
IUUC-Pgr-103523 Puccinia graminis 42.68 3.00e-73 268.00
IUUC-Ptt-103930 Puccinia triticina 40.96 1.00e-72 266.00
IUUC-Pte-104299 Pyrenophora teres 47.80 1.00e-92 332.00
IUUC-Pyt-104564 Pyrenophora triticirepentis 48.43 7.00e-93 333.00
IUUC-Rno-105796 Rattus norvegicus 89.49 2.00e-179 621.00
IUUC-Sha-107191 Sarcophilus harrisii 89.30 9.00e-176 608.00
IUUC-Sja-107952 Schizosaccharomyces japonicus 37.92 2.00e-63 235.00
IUUC-Spo-108249 Schizosaccharomyces pombe 42.90 2.00e-79 288.00
IUUC-Ssl-108448 Sclerotinia sclerotiorum 49.84 8.00e-94 336.00
IUUC-Sit-110805 Setaria italica 58.28 1.00e-118 419.00
IUUC-Sly-111567 Solanum lycopersicum 62.90 2.00e-125 441.00
IUUC-Stu-112562 Solanum tuberosum 61.80 2.00e-126 444.00
IUUC-Sar-112991 Sorex araneus 95.89 1.00e-118 417.00
IUUC-Sbi-114010 Sorghum bicolor 58.58 3.00e-118 417.00
IUUC-Sre-114947 Sporisorium reilianum 42.68 4.00e-73 268.00
IUUC-Ssc-115371 Sus scrofa 88.92 1.00e-176 612.00
IUUC-Tgu-117429 Taeniopygia guttata 91.12 3.00e-176 610.00
IUUC-Tru-118081 Takifugu rubripes 84.29 8.00e-172 595.00
IUUC-Tsy-119101 Tarsius syrichta 77.56 1.00e-147 515.00
IUUC-Tni-120532 Tetraodon nigroviridis 84.88 1.00e-169 588.00
IUUC-Tca-121373 Theobroma cacao 61.74 8.00e-124 436.00
IUUC-Tre-122050 Trichoderma reesei 46.28 1.00e-90 326.00
IUUC-Tvi-122394 Trichoderma virens 46.42 1.00e-84 306.00
IUUC-Tae-124661 Triticum aestivum 59.03 4.00e-118 417.00
IUUC-Tme-126998 Tuber melanosporum 51.13 5.00e-94 337.00
IUUC-Tbe-128032 Tupaia belangeri 89.49 1.00e-178 618.00
IUUC-Ttr-129102 Tursiops truncatus 79.55 3.00e-150 524.00
IUUC-Uma-129363 Ustilago maydis 43.30 2.00e-76 278.00
IUUC-Vda-129891 Verticillium dahliae 49.84 1.00e-93 336.00
IUUC-Vpa-130827 Vicugna pacos 88.35 2.00e-176 610.00
IUUC-Vvi-131202 Vitis vinifera 60.00 3.00e-122 431.00
IUUC-Xtr-132769 Xenopus tropicalis 83.57 5.00e-164 570.00
IUUC-Xma-133147 Xiphophorus maculatus 84.59 8.00e-169 585.00
IUUC-Yli-134352 Yarrowia lipolytica 33.78 1.00e-35 143.00
IUUC-Zma-135294 Zea mays 58.58 4.00e-118 417.00
Created Date 25-Jun-2017

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