iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-012328

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

DAAA02057283

Gene Name

WDR90

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000033677.3	ENSBTAT00000047843.3	ENSBTAP00000045008.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.80e-42	139.3	1502	1534
UBD/Beta-Prp	1.70e-87	293.5	1379	1675

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlr 31
           gH ++v+++af ++  + +++sdDg+++vW + 
   Q: 1502 GHRSKVNDVAFsPNeSHCATCSDDGSVRVWCVA 1534
           8***********7779**************875 PP

UBD/Beta-Prp

   S: 23   sllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.............tgkcvhtlk.ghed 95
           +ll  gs  g + vwd++ g ++   + +++e+  + +s +  +lv+gs+ r +++w +              +++ +   +   + 
   Q: 1379 PLLYCGSSEGQVSVWDTRAGRCFLAWEADDGEIGVLLCSGT--WLVSGSNTRRLRLWAVGavselwrrgsgarSSSVFLERElTLDG 1463
           67889999*******************************99..9*************555555888988875544444443367899 PP
   S: 96   svlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtds 182
            v+s  f+ s d  v+G+   t+    + +g+  + + sgh++ vn v+++p+++ ++++s+D+ vr+W++++ +ll +++    +s
   Q: 1464 AVVSAVFHDSMDMGVVGTTAGTLWYVSWAEGTSTR-LISGHRSKVNDVAFSPNESHCATCSDDGSVRVWCVASTELLIQFQV-LSQS 1548
           9********99************997778888887.88******************************************98.9*** PP
   S: 183  vyslsfdsng......kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlh 263
             +l++++ +      +++++g  dgt++++++ ++ +  ++  h +  + ++fs +++ ++sg +Dg + +  lr+g + ++l+ h
   Q: 1549 CLCLAWSPPScgrpeeEHVAAGYSDGTLRVFSIARSAVELKMCPHAAALRALAFSADGQTIISGDKDGLVAVSRLRTGMTFRVLSDH 1635
           *****99999999999**********************************************************************8 PP
   S: 264  nssvisvavlsfgdnvl...........vlgsedskvniwkl 294
           +    ++++l+ +++++           +++s+d++v +w+ 
   Q: 1636 R--GAPICTLQSTRKECgdfgaegtdlwLAASGDQRVSVWAS 1675
           8..777777778888888888888888788888*******85 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

QRAGQQQGRG GPPTPMWQQP FLNVFRHFKV DEWKRSTKEG DVAAVTDKTL KCTVYRVRGS 60
VSASNYIQLP KTSTQSLGLT GRYLYVLFRP LPTKHFVIHL DVSTEDSQVI RVSFSNLFKE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGAGGGCTG GGCAGCAGCA GGGGAGGGGA GGACCACCCA CGCCAAGTGC GGTCAGGATT 60
TCTGGGCTGC GTCTCACTCC CATCGTGAAC ACGGGCCTCA AGATCAGGAA CCTTCCGGAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR007714--CFA20/WDR90/C3orf67
IPR003143--Cyt_cd1_C
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR030466--WDR90

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF05018--DUF667
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001801	Ailuropoda melanoleuca	74.83	0.00e+00	2555.00
IUUC-Apl-003387	Anas platyrhynchos	54.35	0.00e+00	1733.00
IUUC-Aca-005235	Anolis carolinensis	51.76	0.00e+00	1612.00
IUUC-Ame-011595	Astyanax mexicanus	53.63	0.00e+00	696.00
IUUC-Cja-019058	Callithrix jacchus	69.78	0.00e+00	1218.00
IUUC-Cfa-020934	Canis familiaris	71.22	0.00e+00	2343.00
IUUC-Cpo-022025	Cavia porcellus	65.19	0.00e+00	2236.00
IUUC-Cre-022928	Chlamydomonas reinhardtii	30.74	4.00e-68	254.00
IUUC-Csa-023022	Chlorocebus sabaeus	69.33	0.00e+00	2288.00
IUUC-Cin-025133	Ciona intestinalis	36.07	0.00e+00	1162.00
IUUC-Csv-025816	Ciona savignyi	34.94	0.00e+00	1018.00
IUUC-Dre-028823	Danio rerio	48.09	0.00e+00	950.00
IUUC-Dno-029211	Dasypus novemcinctus	69.48	0.00e+00	906.00
IUUC-Dor-030211	Dipodomys ordii	69.45	0.00e+00	1347.00
IUUC-Ete-032363	Echinops telfairi	56.85	0.00e+00	892.00
IUUC-Eca-034296	Equus caballus	75.47	0.00e+00	2496.00
IUUC-Eeu-035226	Erinaceus europaeus	56.29	0.00e+00	821.00
IUUC-Fca-035384	Felis catus	74.35	0.00e+00	2531.00
IUUC-Fal-037660	Ficedula albicollis	54.58	0.00e+00	1776.00
IUUC-Gga-040666	Gallus gallus	61.91	0.00e+00	877.00
IUUC-Gac-041358	Gasterosteus aculeatus	47.72	0.00e+00	907.00
IUUC-Ggo-045121	Gorilla gorilla	68.73	0.00e+00	2328.00
IUUC-Hsa-046289	Homo sapiens	69.04	0.00e+00	2281.00
IUUC-Itr-048485	Ictidomys tridecemlineatus	69.04	0.00e+00	2251.00
IUUC-Lch-050009	Latimeria chalumnae	48.12	0.00e+00	1637.00
IUUC-Loc-052629	Lepisosteus oculatus	46.13	0.00e+00	846.00
IUUC-Mcc-055834	Macaca mulatta	67.64	0.00e+00	1290.00
IUUC-Meu-056162	Macropus eugenii	56.22	0.00e+00	731.00
IUUC-Mga-060167	Meleagris gallopavo	52.34	0.00e+00	875.00
IUUC-Mmr-060761	Microcebus murinus	73.36	1.00e-131	462.00
IUUC-Mdo-061886	Monodelphis domestica	57.03	0.00e+00	2107.00
IUUC-Mmu-063652	Mus musculus	66.92	0.00e+00	2350.00
IUUC-Mlu-068141	Myotis lucifugus	72.28	0.00e+00	2472.00
IUUC-Nle-069133	Nomascus leucogenys	64.98	0.00e+00	1482.00
IUUC-Ont-072496	Oreochromis niloticus	47.34	0.00e+00	1672.00
IUUC-Oan-072833	Ornithorhynchus anatinus	50.67	0.00e+00	915.00
IUUC-Ola-086564	Oryzias latipes	47.01	0.00e+00	915.00
IUUC-Oga-088919	Otolemur garnettii	65.76	0.00e+00	2244.00
IUUC-Oar-089946	Ovis aries	77.94	0.00e+00	2503.00
IUUC-Ptr-090755	Pan troglodytes	67.49	0.00e+00	1906.00
IUUC-Pan-092054	Papio anubis	68.87	0.00e+00	2306.00
IUUC-Psi-093467	Pelodiscus sinensis	56.07	0.00e+00	1996.00
IUUC-Pma-094573	Petromyzon marinus	44.17	0.00e+00	829.00
IUUC-Pfo-096849	Poecilia formosa	47.96	0.00e+00	858.00
IUUC-Pab-098320	Pongo abelii	67.99	0.00e+00	2062.00
IUUC-Pca-100172	Procavia capensis	56.64	0.00e+00	1750.00
IUUC-Pva-102772	Pteropus vampyrus	75.96	0.00e+00	1444.00
IUUC-Rno-105046	Rattus norvegicus	67.41	0.00e+00	2387.00
IUUC-Sha-107094	Sarcophilus harrisii	57.38	0.00e+00	2136.00
IUUC-Ssc-116257	Sus scrofa	70.51	0.00e+00	2327.00
IUUC-Tgu-117323	Taeniopygia guttata	53.07	0.00e+00	1477.00
IUUC-Tru-118717	Takifugu rubripes	45.84	0.00e+00	921.00
IUUC-Tni-120108	Tetraodon nigroviridis	45.42	0.00e+00	896.00
IUUC-Ttr-128378	Tursiops truncatus	81.93	0.00e+00	1029.00
IUUC-Xtr-131760	Xenopus tropicalis	49.04	0.00e+00	1683.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence