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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Rno-105829
UUCD1 version UUC-RaN-00051
Ensembl Protein ID ENSRNOP00000026653.5
UniProt Accession B2RYJ3; B2RYJ3_RAT
Genbank Protein ID AAI66799.1
Protein Name Cullin 4A; RGD1563853 protein
Genbank Nucleotide ID AABR07072527
Gene Name Cul4a; RGD1563853
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000019649.8 ENSRNOT00000026653.7 ENSRNOP00000026653.5
ENSRNOG00000019649.8 ENSRNOT00000092421.1 ENSRNOP00000075917.1
ENSRNOG00000019649.8 ENSRNOT00000092551.1 ENSRNOP00000075804.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
CPLMdbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/Cullin 7.50e-220 732.2 65 660
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/Cullin

   S: 1    klreavkkilrqesvkkeyeelytavynlclskvgaklYkklkevleefi.kqvkkkveesedeq.lLktynreWekfreqlkvlrkif 87
    kl+eavk+i++++s+++++eely+av+nlc++kv+ lYk+l++v+e+++ +q+ +e+s d+ +Lk++n++W+++++q+ ++r+if
   Q: 65 KLHEAVKAIQSSTSIRYNLEELYQAVENLCSHKVSPTLYKQLRQVCEDHVqAQILPFREDSLDSVlFLKKINTCWQDHCRQMIMIRSIF 153
    5899**********************************************99************************************* PP
   S: 88 ayldrtyvkkskkvsevrkLaldlwrkeived..ikkrllelllklieaeRkgeavdrrllsgvveslveLslnklaiykesFEakfle 174
    ++ldrtyv +++++ ++++++l+l+r++i++d +++++++ +l li +eR+geavdr+ll+++ ++l++L ++yk+sFE kfle
   Q: 154 LFLDRTYVLQNSMLPSIWDMGLELFRNHIISDrmVQSKTIDGILLLIGRERSGEAVDRSLLRSLLSMLSDL-----QVYKDSFELKFLE 237
    *******************************************************************9998.....9************ PP
   S: 175 atqefykaesaeflqenevdeYlkkvearlneeeeraaryleestetkLlevvekeliakhlesll.aelvallrdkktedlsrmykLl 262
    +t+ +y+ae ++++q +ev eYl++v +rl+ee +r+ +yl++st+++L+++vek+l+ +hl+++l ++l++ll++++ dl++my+L+
   Q: 238 ETNCLYAAEGQRLMQDREVPEYLNHVSKRLEEEADRVITYLDHSTQKPLIACVEKQLLGEHLTAILqKGLEQLLDENRVPDLTQMYQLF 326
    ****************************************************************9989********************* PP
   S: 263 srvlngleellkeleshikeqgkaaltaeekekdpkkyVerllelknklqklvseaFnndakFlkaldkafetfvnknsvlkaaksp.E 350
    srv+ g + ll++++++ik+ g+++++++ek+kd +V++ll++k+k++++v+ +F+ +++F++ ++++fetf+nk+ +++p E
   Q: 327 SRVKGGQHALLQHWSEYIKTFGTTIVINPEKDKD---MVQDLLDFKDKVDHVVEVCFQRNERFINLMKESFETFINKR-----PNKPaE 407
    **********************************...*****************************************.....66666* PP
   S: 351 llAryiDqlLrksskglteeeleaqldkvllvfkyisekdvFekyYkkhLakRLlsgksasseaEesviekLkeecgaeftskLerMfq 439
    l+A+++D++Lr+++k++t+eele++ldk++++f++i++kdvFe++Ykk+LakRLl+gksas +aE+s+++kLk+ecga+ftskLe+Mf+
   Q: 408 LIAKHVDSKLRAGNKEATDEELERILDKIMILFRFIHGKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFK 496
    ***************************************************************************************** PP
   S: 440 dlkvSedlnrqFkeekenteesesvelsvlvLsagaWptasetekvsLPaelektiekfeefYlekhsgRkLqWqhtlgraelkaelkk 528
    d+++S+d++ +Fk++++n+++ ++l+v++L++g+Wpt++ +e v+LP+e+ +++e f++fYl khsgRkLqWq+tlg+a lka +k+
   Q: 497 DMELSKDIMVHFKQHMQNQSAPGPIDLTVNILTMGYWPTYTPME-VHLPPEMVRLQEVFKTFYLGKHSGRKLQWQTTLGHAVLKADFKE 584
    ****************************************9999.******************************************** PP
   S: 529 gkyelqVstfQmavLLafnnsekvsveelkkatelpeeeLrrtlqsLvsskkqvlkkepeskeieeedlfsvNqef 604
    gk+e+qVs fQ++vLL+fn+ + +s+ee+k+at+++++eLrrtlqsL+++k++vl k+p++ke+e++d+f++N +f
   Q: 585 GKKEFQVSLFQTLVLLMFNEGDGFSFEEIKMATGIEDSELRRTLQSLACGKARVLIKSPKGKEVEDGDKFIFNADF 660
    *************************************************************************998 PP
   

Organism Rattus norvegicus
Protein Sequence
(Fasta)
MADEGPRKGS VSALMGRTNG LTKPAALASG PAKPGGTGGS RKLVIKNFRD RPRLPDNYTQ 60
DTWRKLHEAV KAIQSSTSIR YNLEELYQAV ENLCSHKVSP TLYKQLRQVC EDHVQAQILP 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-105829|E3,Cullin|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
GCGGCGTCCG GCCCAGCCAT GGCGGACGAG GGCCCTCGGA AGGGCAGCGT CTCGGCTCTC 60
ATGGGCCGCA CCAACGGCCT CACCAAGCCC GCGGCGTTGG CCAGTGGCCC CGCCAAACCG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-105829|E3,Cullin|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR016157--Cullin_CS
IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS01256--CULLIN_1
PS50069--CULLIN_2

Pfam

PF00888--Cullin
PF10557--Cullin_Nedd8

SMART

SM00182--CULLIN
SM00884--Cullin_Nedd8

Gene Ontology

GO:0031464--C:Cul4A-RING E3 ubiquitin ligase complex
GO:0031625--F:ubiquitin protein ligase binding
GO:0006974--P:cellular response to DNA damage stimulus
GO:0030097--P:hemopoiesis
GO:0001701--P:in utero embryonic development
GO:0030853--P:negative regulation of granulocyte differentiation
GO:0008284--P:positive regulation of cell proliferation
GO:1900087--P:positive regulation of G1/S transition of mitotic cell cycle
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:2000001--P:regulation of DNA damage checkpoint
GO:2000819--P:regulation of nucleotide-excision repair
GO:0051246--P:regulation of protein metabolic process
GO:0035019--P:somatic stem cell population maintenance

KEGG rno:361181
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001592 Ailuropoda melanoleuca 93.22 0.00e+00 1365.00
IUUC-Apl-003269 Anas platyrhynchos 91.97 0.00e+00 1328.00
IUUC-Bta-012355 Bos taurus 93.06 0.00e+00 1368.00
IUUC-Cja-019861 Callithrix jacchus 94.97 0.00e+00 1390.00
IUUC-Cfa-021009 Canis familiaris 92.77 0.00e+00 1416.00
IUUC-Cpo-021867 Cavia porcellus 96.18 0.00e+00 1462.00
IUUC-Csa-024139 Chlorocebus sabaeus 94.99 0.00e+00 1422.00
IUUC-Cho-024899 Choloepus hoffmanni 95.63 0.00e+00 1001.00
IUUC-Cme-027355 Cyanidioschyzon merolae 33.38 2.00e-114 406.00
IUUC-Dno-028879 Dasypus novemcinctus 86.59 0.00e+00 1318.00
IUUC-Dor-030698 Dipodomys ordii 96.97 0.00e+00 1438.00
IUUC-Ete-033101 Echinops telfairi 89.19 0.00e+00 1266.00
IUUC-Eca-033696 Equus caballus 93.91 0.00e+00 1368.00
IUUC-Fca-036333 Felis catus 94.23 0.00e+00 1364.00
IUUC-Fal-036995 Ficedula albicollis 91.66 0.00e+00 1341.00
IUUC-Gga-040358 Gallus gallus 88.92 0.00e+00 1371.00
IUUC-Hsa-045679 Homo sapiens 94.99 0.00e+00 1423.00
IUUC-Itr-048182 Ictidomys tridecemlineatus 95.70 0.00e+00 1316.00
IUUC-Lch-050417 Latimeria chalumnae 87.09 0.00e+00 1338.00
IUUC-Laf-054100 Loxodonta africana 93.33 0.00e+00 1359.00
IUUC-Mcc-055168 Macaca mulatta 95.59 0.00e+00 1273.00
IUUC-Meu-056492 Macropus eugenii 74.38 6.00e-173 600.00
IUUC-Mga-059866 Meleagris gallopavo 92.28 0.00e+00 1334.00
IUUC-Mmr-061551 Microcebus murinus 93.81 0.00e+00 1404.00
IUUC-Mdo-062215 Monodelphis domestica 91.37 0.00e+00 1409.00
IUUC-Mmu-063402 Mus musculus 99.74 0.00e+00 1487.00
IUUC-Mpu-066383 Mustela putorius furo 94.11 0.00e+00 1362.00
IUUC-Mlu-067450 Myotis lucifugus 88.61 0.00e+00 1346.00
IUUC-Nle-069606 Nomascus leucogenys 94.86 0.00e+00 1422.00
IUUC-Opr-070671 Ochotona princeps 84.44 5.00e-116 411.00
IUUC-Oan-073299 Ornithorhynchus anatinus 87.35 0.00e+00 1342.00
IUUC-Ocu-074731 Oryctolagus cuniculus 95.39 0.00e+00 1446.00
IUUC-Oar-089346 Ovis aries 92.76 0.00e+00 1360.00
IUUC-Ptr-091177 Pan troglodytes 94.99 0.00e+00 1423.00
IUUC-Pan-092191 Papio anubis 94.36 0.00e+00 1410.00
IUUC-Pab-097622 Pongo abelii 94.47 0.00e+00 1415.00
IUUC-Pca-100391 Procavia capensis 85.29 0.00e+00 1010.00
IUUC-Ptt-103903 Puccinia triticina 41.85 1.00e-97 351.00
IUUC-Sha-106762 Sarcophilus harrisii 93.61 0.00e+00 1326.00
IUUC-Ssc-116133 Sus scrofa 92.38 0.00e+00 1390.00
IUUC-Tgu-116961 Taeniopygia guttata 91.26 0.00e+00 1338.00
IUUC-Ttr-128326 Tursiops truncatus 88.20 0.00e+00 1176.00
Created Date 25-Jun-2017

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