iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sbi-114857

Ensembl Protein ID

Sb03g007500.1

UniProt Accession

A0A1B6Q258; A0A1B6Q258_SORBI

Genbank Protein ID

KXG32003.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000762

Gene Name

SORBI_003G089100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb03g007500	Sb03g007500.1	Sb03g007500.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-31	107.8	231	262
UBD/Beta-Prp	1.40e-57	195.9	55	275

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           gHt+s++++++ sd + +++ s D++ kvWD+
   Q: 231  GHTGSIYAVSWsSDsKQVLTVSADKSAKVWDI 262
           8***********999****************6 PP

UBD/Beta-Prp

   S: 8    hhksvitcvkfspdksllatgsrdgtikvw.dvttgkllrslsgheaevtavkfspdgkilvtgseD....rtikvwdlstgkcvhtlkghedsvl 98
           +h  + t+  fsp+++++a++ ++g+++vw ++ +  l +++   ++ v ++++spdg +++ +s D     +++ +  ++g++v  + gh+++vl
   Q: 55   DHAYPTTVARFSPNGEWVASADASGCVRVWgRYGDRALKAEFRPLSGRVDDLRWSPDG-LRIVVSGDgkgkSFVRAFVWDSGSTVGEFDGHSKRVL 149
           6777999999********************446666678888***************9.999999998999999999999**************** PP
   S: 99   slsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtl..tgghtdsvyslsfdsn 191
           s++f p++  ++v+ ++d  ++ ++ +  +  +   + h+ +vnc+++ pdg+ +++ s D++  ++d ktg+ + +l  +gght+s+y +s++s+
   Q: 150  SCDFKPTRpFRIVTCGEDFLANFYEGPPFKFKH-SIRDHSNFVNCIRYAPDGSKFITVSSDKKGLIYDGKTGEKIGELstEGGHTGSIYAVSWSSD 244
           ******99899*********************9.99*******************************************9999************* PP
   S: 192  gkelvsgsldgtvklwdlq...tgecvrtln 219
           +k+++++s d++ k+wd+    +g+  rtl 
   Q: 245  SKQVLTVSADKSAKVWDIMedaSGKLNRTLA 275
           ******************8777777777665 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MAQLVETYAC SPATERGRGI LLAGDPKTDT IAYCTGRSVI IRRLDAPLDA WAYQDHAYPT 60
TVARFSPNGE WVASADASGC VRVWGRYGDR ALKAEFRPLS GRVDDLRWSP DGLRIVVSGD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTCTCGCGA CCTCAGATCA CGCGACGCAA GGAGAAAGAA AAAAAAAATG GCGCAGCTGG 60
TGGAGACGTA CGCGTGCTCG CCGGCGACGG AGCGCGGCCG TGGGATCCTC CTGGCCGGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000457	Aegilops tauschii	85.34	0.00e+00	909.00
IUUC-Aml-002368	Ailuropoda melanoleuca	36.62	7.00e-108	383.00
IUUC-Atr-003160	Amborella trichopoda	72.50	0.00e+00	937.00
IUUC-Apl-004012	Anas platyrhynchos	37.25	2.00e-105	375.00
IUUC-Aca-004707	Anolis carolinensis	36.33	1.00e-106	379.00
IUUC-Aly-006465	Arabidopsis lyrata	68.64	0.00e+00	871.00
IUUC-Ath-006740	Arabidopsis thaliana	68.64	0.00e+00	872.00
IUUC-Ago-007920	Ashbya gossypii	28.93	2.00e-65	243.00
IUUC-Acl-008262	Aspergillus clavatus	33.39	5.00e-87	314.00
IUUC-Afl-008471	Aspergillus flavus	31.14	1.00e-70	259.00
IUUC-Afu-008989	Aspergillus fumigatus	32.56	5.00e-78	284.00
IUUC-Ani-009167	Aspergillus nidulans	32.95	7.00e-93	333.00
IUUC-Ang-009595	Aspergillus niger	33.22	1.00e-80	293.00
IUUC-Aor-009908	Aspergillus oryzae	32.76	5.00e-86	311.00
IUUC-Ate-010580	Aspergillus terreus	32.68	8.00e-88	318.00
IUUC-Ame-011269	Astyanax mexicanus	30.49	2.00e-43	169.00
IUUC-Bgr-011996	Blumeria graminis	29.53	7.00e-77	280.00
IUUC-Bta-013278	Bos taurus	36.93	1.00e-110	392.00
IUUC-Bci-013925	Botrytis cinerea	31.53	1.00e-85	309.00
IUUC-Bdi-014659	Brachypodium distachyon	86.72	0.00e+00	1100.00
IUUC-Bol-016043	Brassica oleracea	61.83	0.00e+00	811.00
IUUC-Bra-017139	Brassica rapa	67.60	0.00e+00	859.00
IUUC-Cel-018417	Caenorhabditis elegans	32.69	7.00e-82	297.00
IUUC-Cja-019952	Callithrix jacchus	37.09	3.00e-105	374.00
IUUC-Cfa-020225	Canis familiaris	36.60	1.00e-108	386.00
IUUC-Cpo-021900	Cavia porcellus	37.50	8.00e-107	380.00
IUUC-Csa-023028	Chlorocebus sabaeus	36.76	5.00e-105	374.00
IUUC-Cho-025030	Choloepus hoffmanni	29.93	2.00e-66	245.00
IUUC-Cin-025152	Ciona intestinalis	37.94	1.00e-49	188.00
IUUC-Csv-025986	Ciona savignyi	29.72	1.00e-58	219.00
IUUC-Cgl-026597	Colletotrichum gloeosporioides	32.18	3.00e-80	291.00
IUUC-Cne-026814	Cryptococcus neoformans	32.36	4.00e-78	284.00
IUUC-Dre-027498	Danio rerio	41.45	8.00e-42	162.00
IUUC-Dno-029383	Dasypus novemcinctus	36.60	1.00e-105	376.00
IUUC-Dor-030633	Dipodomys ordii	36.78	2.00e-97	348.00
IUUC-Dse-031526	Dothistroma septosporum	31.81	3.00e-82	298.00
IUUC-Dme-031597	Drosophila melanogaster	37.46	2.00e-112	399.00
IUUC-Ete-032780	Echinops telfairi	34.28	7.00e-92	330.00
IUUC-Eca-034306	Equus caballus	36.07	3.00e-104	371.00
IUUC-Eeu-034531	Erinaceus europaeus	29.75	2.00e-37	149.00
IUUC-Fca-036301	Felis catus	37.11	6.00e-110	390.00
IUUC-Fal-037361	Ficedula albicollis	36.62	1.00e-111	395.00
IUUC-Fox-037924	Fusarium oxysporum	33.17	7.00e-90	323.00
IUUC-Fso-038199	Fusarium solani	32.18	2.00e-86	312.00
IUUC-Gmo-039238	Gadus morhua	36.51	4.00e-105	374.00
IUUC-Ggr-039830	Gaeumannomyces graminis	31.81	3.00e-73	268.00
IUUC-Gga-040235	Gallus gallus	36.66	2.00e-106	378.00
IUUC-Gac-042363	Gasterosteus aculeatus	37.91	2.00e-109	388.00
IUUC-Gma-042924	Glycine max	69.75	0.00e+00	917.00
IUUC-Ggo-044632	Gorilla gorilla	36.10	3.00e-100	358.00
IUUC-Hsa-045792	Homo sapiens	36.60	2.00e-108	385.00
IUUC-Hvu-047517	Hordeum vulgare	86.39	0.00e+00	1126.00
IUUC-Itr-048076	Ictidomys tridecemlineatus	37.27	3.00e-109	388.00
IUUC-Kpa-049183	Komagataella pastoris	32.89	4.00e-81	294.00
IUUC-Lch-050428	Latimeria chalumnae	36.70	3.00e-109	388.00
IUUC-Lpe-051306	Leersia perrieri	91.80	0.00e+00	1172.00
IUUC-Loc-052096	Lepisosteus oculatus	33.28	2.00e-87	315.00
IUUC-Lma-053313	Leptosphaeria maculans	34.80	6.00e-92	333.00
IUUC-Laf-054060	Loxodonta africana	36.39	3.00e-104	371.00
IUUC-Mcc-055619	Macaca mulatta	36.11	3.00e-101	361.00
IUUC-Meu-056689	Macropus eugenii	35.04	5.00e-66	244.00
IUUC-Mor-056940	Magnaporthe oryzae	32.78	8.00e-76	277.00
IUUC-Mpo-057557	Magnaporthe poae	27.82	9.00e-51	193.00
IUUC-Mtr-057922	Medicago truncatula	69.26	0.00e+00	905.00
IUUC-Mla-059103	Melampsora laricipopulina	29.34	2.00e-68	252.00
IUUC-Mga-060150	Meleagris gallopavo	37.01	9.00e-107	380.00
IUUC-Mvi-060448	Microbotryum violaceum	31.15	8.00e-69	253.00
IUUC-Mmr-061226	Microcebus murinus	36.44	3.00e-102	364.00
IUUC-Mdo-062674	Monodelphis domestica	37.21	4.00e-111	394.00
IUUC-Mmu-064170	Mus musculus	37.09	6.00e-107	380.00
IUUC-Mac-065124	Musa acuminata	75.74	0.00e+00	994.00
IUUC-Mpu-066001	Mustela putorius furo	35.28	6.00e-104	370.00
IUUC-Mlu-067253	Myotis lucifugus	37.50	3.00e-107	381.00
IUUC-Nfi-068550	Neosartorya fischeri	33.12	5.00e-90	324.00
IUUC-Ncr-068948	Neurospora crassa	33.12	2.00e-88	319.00
IUUC-Nle-070115	Nomascus leucogenys	36.01	5.00e-95	340.00
IUUC-Opr-070254	Ochotona princeps	36.29	3.00e-101	361.00
IUUC-Ont-071666	Oreochromis niloticus	37.68	3.00e-104	371.00
IUUC-Oan-073594	Ornithorhynchus anatinus	31.52	1.00e-29	122.00
IUUC-Ocu-074824	Oryctolagus cuniculus	36.17	1.00e-101	363.00
IUUC-Oba-075010	Oryza barthii	92.13	0.00e+00	1179.00
IUUC-Obr-076364	Oryza brachyantha	90.82	0.00e+00	1162.00
IUUC-Ogl-077019	Oryza glaberrima	92.13	0.00e+00	1179.00
IUUC-Ogu-078496	Oryza glumaepatula	92.13	0.00e+00	1179.00
IUUC-Oin-080116	Oryza indica	91.97	0.00e+00	1177.00
IUUC-Olo-080290	Oryza longistaminata	92.13	0.00e+00	1177.00
IUUC-Ome-081969	Oryza meridionalis	91.97	0.00e+00	1177.00
IUUC-Oni-082075	Oryza nivara	92.13	0.00e+00	1179.00
IUUC-Opu-083959	Oryza punctata	92.62	0.00e+00	1182.00
IUUC-Oru-084711	Oryza rufipogon	92.13	0.00e+00	1179.00
IUUC-Osa-085958	Oryza sativa	91.97	0.00e+00	1177.00
IUUC-Ola-086968	Oryzias latipes	36.89	3.00e-111	395.00
IUUC-Oga-089108	Otolemur garnettii	36.14	1.00e-107	382.00
IUUC-Oar-089986	Ovis aries	35.66	1.00e-99	356.00
IUUC-Ptr-091281	Pan troglodytes	36.78	2.00e-108	385.00
IUUC-Pan-092585	Papio anubis	36.76	5.00e-105	374.00
IUUC-Psi-093811	Pelodiscus sinensis	36.91	1.00e-110	393.00
IUUC-Pma-094396	Petromyzon marinus	36.23	6.00e-107	380.00
IUUC-Pno-095086	Phaeosphaeria nodorum	33.60	1.00e-84	306.00
IUUC-Ppa-095876	Physcomitrella patens	56.98	0.00e+00	734.00
IUUC-Pfo-096973	Poecilia formosa	36.99	2.00e-114	405.00
IUUC-Pab-098391	Pongo abelii	36.76	1.00e-104	372.00
IUUC-Pop-098850	Populus trichocarpa	69.51	0.00e+00	920.00
IUUC-Pca-100257	Procavia capensis	57.14	9.00e-26	110.00
IUUC-Ppe-101578	Prunus persica	69.67	0.00e+00	925.00
IUUC-Pva-102872	Pteropus vampyrus	35.56	2.00e-102	365.00
IUUC-Pgr-103593	Puccinia graminis	31.90	6.00e-69	254.00
IUUC-Pte-104365	Pyrenophora teres	33.88	5.00e-85	307.00
IUUC-Pyt-104689	Pyrenophora triticirepentis	34.42	7.00e-90	323.00
IUUC-Rno-105737	Rattus norvegicus	36.93	6.00e-111	394.00
IUUC-Sce-106383	Saccharomyces cerevisiae	31.03	2.00e-68	253.00
IUUC-Sha-107084	Sarcophilus harrisii	35.92	2.00e-88	319.00
IUUC-Sja-107688	Schizosaccharomyces japonicus	34.54	2.00e-94	338.00
IUUC-Spo-108309	Schizosaccharomyces pombe	32.08	5.00e-80	291.00
IUUC-Ssl-108408	Sclerotinia sclerotiorum	31.63	2.00e-85	309.00
IUUC-Smo-109255	Selaginella moellendorffii	51.48	5.00e-179	620.00
IUUC-Sit-109962	Setaria italica	94.92	0.00e+00	1206.00
IUUC-Sly-110897	Solanum lycopersicum	69.34	0.00e+00	911.00
IUUC-Stu-111971	Solanum tuberosum	69.18	0.00e+00	914.00
IUUC-Sar-113415	Sorex araneus	48.46	1.00e-30	127.00
IUUC-Sre-114900	Sporisorium reilianum	34.79	5.00e-95	340.00
IUUC-Tgu-117256	Taeniopygia guttata	36.35	4.00e-111	394.00
IUUC-Tru-117871	Takifugu rubripes	37.38	5.00e-111	394.00
IUUC-Tsy-119172	Tarsius syrichta	45.00	7.00e-60	224.00
IUUC-Tni-120339	Tetraodon nigroviridis	37.91	2.00e-112	398.00
IUUC-Tca-121609	Theobroma cacao	67.94	0.00e+00	902.00
IUUC-Tre-122076	Trichoderma reesei	32.58	2.00e-81	295.00
IUUC-Tvi-122528	Trichoderma virens	33.61	2.00e-88	319.00
IUUC-Tae-124549	Triticum aestivum	86.39	0.00e+00	1127.00
IUUC-Tur-126845	Triticum urartu	78.41	0.00e+00	889.00
IUUC-Tme-127217	Tuber melanosporum	32.05	8.00e-84	303.00
IUUC-Tbe-127526	Tupaia belangeri	35.46	5.00e-105	374.00
IUUC-Ttr-128898	Tursiops truncatus	34.58	6.00e-95	340.00
IUUC-Uma-129631	Ustilago maydis	35.54	3.00e-100	358.00
IUUC-Vda-129732	Verticillium dahliae	30.17	5.00e-67	248.00
IUUC-Vvi-131217	Vitis vinifera	71.80	0.00e+00	929.00
IUUC-Xtr-132860	Xenopus tropicalis	34.09	1.00e-92	333.00
IUUC-Xma-133830	Xiphophorus maculatus	37.32	5.00e-116	410.00
IUUC-Yli-134335	Yarrowia lipolytica	30.52	1.00e-77	283.00
IUUC-Zma-135907	Zea mays	96.72	0.00e+00	1222.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence