iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Dre-028167

UUCD1 version

UUC-DaR-01273

Ensembl Protein ID

ENSDARP00000071301.4

UniProt Accession

Q7SX58; Q7SX58_DANRE

Genbank Protein ID

AAH55237.1; AAI61664.1; AAI71389.1; AAI71393.1; AAP82281.1

Protein Name

Coronin

Genbank Nucleotide ID

BX649554; BC161664; BC171389; BC171393; AY330221

Gene Name

coro1a

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSDARG00000054610.4	ENSDART00000076830.4	ENSDARP00000071301.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.40e-19	68.7	79	115

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDlrtgv 34
           gHt++v +++f   +d++++sGs D+++++W++ +g 
   Q: 79   GHTGPVLDIEFcphNDNIIASGSEDCSVMIWEIPEGG 115
           8***********9877****************87765 PP

Organism

Danio rerio

Protein Sequence
(Fasta)

MSRKVVRSSK FRHVFGQAVK ADQCYDDIRI SQMTWDSNFC SVNPKFVSMI VDASGGGAFI 60
VLPLSKTGRI DMSQPTVCGH TGPVLDIEFC PHNDNIIASG SEDCSVMIWE IPEGGLVTPL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGAAACATA AAGCGAGGAC ACCTCCCATC CTCATCTACA TCTAAAACTC TCACTTCCTC 60
CATGATTTAG ATCGAGCTCC AGCCACAACC GCTGGCATTC ACCCACTTCT CTCCATCTGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR029508--CORO1A
IPR015505--Coronin
IPR015048--DUF1899
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08953--DUF1899
PF00400--WD40

SMART

SM01166--DUF1899
SM00320--WD40

Gene Ontology

GO:0015629--C:actin cytoskeleton
GO:0051015--F:actin filament binding
GO:0030036--P:actin cytoskeleton organization
GO:0007420--P:brain development
GO:0021952--P:central nervous system projection neuron axonogenesis
GO:0001654--P:eye development
GO:0030595--P:leukocyte chemotaxis
GO:0001845--P:phagolysosome assembly

KEGG

dre:100002113

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ame-011101	Astyanax mexicanus	89.89	0.00e+00	860.00
IUUC-Bta-013168	Bos taurus	68.86	0.00e+00	681.00
IUUC-Cja-019660	Callithrix jacchus	68.86	0.00e+00	681.00
IUUC-Cpo-022056	Cavia porcellus	68.86	0.00e+00	683.00
IUUC-Csa-023193	Chlorocebus sabaeus	69.08	0.00e+00	682.00
IUUC-Dno-029363	Dasypus novemcinctus	69.74	0.00e+00	687.00
IUUC-Eeu-034499	Erinaceus europaeus	67.75	2.00e-168	585.00
IUUC-Fca-036472	Felis catus	68.86	0.00e+00	681.00
IUUC-Gmo-039519	Gadus morhua	83.96	0.00e+00	818.00
IUUC-Gac-042545	Gasterosteus aculeatus	85.27	0.00e+00	826.00
IUUC-Ggo-045162	Gorilla gorilla	68.64	0.00e+00	680.00
IUUC-Hsa-046874	Homo sapiens	68.64	0.00e+00	680.00
IUUC-Itr-048911	Ictidomys tridecemlineatus	69.30	0.00e+00	685.00
IUUC-Lch-050582	Latimeria chalumnae	67.87	0.00e+00	691.00
IUUC-Laf-053427	Loxodonta africana	69.08	0.00e+00	671.00
IUUC-Mcc-055750	Macaca mulatta	73.72	0.00e+00	667.00
IUUC-Mmr-060858	Microcebus murinus	68.86	0.00e+00	683.00
IUUC-Mdo-062469	Monodelphis domestica	66.95	0.00e+00	674.00
IUUC-Nle-069815	Nomascus leucogenys	69.30	0.00e+00	686.00
IUUC-Opr-070911	Ochotona princeps	69.67	0.00e+00	685.00
IUUC-Ont-072391	Oreochromis niloticus	87.67	0.00e+00	836.00
IUUC-Ola-087129	Oryzias latipes	81.74	0.00e+00	812.00
IUUC-Oar-089676	Ovis aries	68.86	0.00e+00	682.00
IUUC-Ptr-091647	Pan troglodytes	68.86	0.00e+00	681.00
IUUC-Pan-092672	Papio anubis	69.08	0.00e+00	682.00
IUUC-Pfo-096735	Poecilia formosa	85.71	0.00e+00	825.00
IUUC-Sar-113292	Sorex araneus	76.49	6.00e-179	620.00
IUUC-Sre-114911	Sporisorium reilianum	36.63	2.00e-77	283.00
IUUC-Tru-117655	Takifugu rubripes	82.73	0.00e+00	814.00
IUUC-Tni-120773	Tetraodon nigroviridis	83.66	0.00e+00	787.00
IUUC-Ttr-128689	Tursiops truncatus	68.64	0.00e+00	678.00
IUUC-Uma-129489	Ustilago maydis	37.05	6.00e-81	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence