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Basic Information Integrated Annotations

Tag Content
iUUCD ID IUUC-Rno-105169
Ensembl Protein ID ENSRNOP00000014568.3
UniProt Accession D4A2F2; D4A2F2_RAT
Genbank Protein ID EDL96380.1
Protein Name Par-6 (Partitioning defective 6) homolog beta (C. elegans) (Predicted); Par-6 family cell polarity regulator beta
Genbank Nucleotide ID AABR07054623
Gene Name Pard6b; Pard6b_predicted; rCG_32335
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000010883.4 ENSRNOT00000014568.4 ENSRNOP00000014568.3
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Post-translational Modifications (PTMs)
dbPAFPhosphositePlus
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
ULD/UDP/UFD/PB1 1.00e-21 77.3 16 96
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   ULD/UDP/UFD/PB1

   S: 1    tvrvkvsykgeirsfaldlekpgkfedLlkavrtltelknsevalkYeDedGDlvtlksDedldkavsllaskksllrlliqkk 84
    t++vk+++++e+r+f+l+++kpgkfe+++ +++++++++n +v ++Y+D +GDl+++++D++++kavs ++++llr++iqkk
   Q: 16 TMEVKSKFGAEFRRFSLERSKPGKFEEFYGLLQHVHKIPNVDVLVGYADIHGDLLPINNDDNYHKAVS---TANPLLRVFIQKK 96
    589*****************************************************************...9*********986 PP
   

Organism Rattus norvegicus
Protein Sequence
(Fasta)
MNRGHRHGVS SGCLGTMEVK SKFGAEFRRF SLERSKPGKF EEFYGLLQHV HKIPNVDVLV 60
GYADIHGDLL PINNDDNYHK AVSTANPLLR VFIQKKEEAD YSAFGTDTLI RKKNVLSNVL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Rno-105169|ULD,PB1|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGGCCGCCGC CGCCTCCGAG CCTCGCTGGG AGGGACCCGT GTCCCCGCCT GCCGCACTGC 60
CAGTCCGACC CTCAGGCCGC CACGGAGCAG CGGGCACAGC GCTGCGCGGA CCTTAGCAGG 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Rno-105169|ULD,PB1|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR000270--PB1_dom
IPR001478--PDZ

PROSITE

PS51745--PB1
PS50106--PDZ

Pfam

PF00564--PB1
PF00595--PDZ

SMART

SM00666--PB1
SM00228--PDZ

Gene Ontology

GO:0016324--C:apical plasma membrane
GO:0005923--C:bicellular tight junction
GO:0005938--C:cell cortex
GO:0005829--C:cytosol
GO:0070062--C:extracellular exosome
GO:0005634--C:nucleus
GO:0043234--C:protein complex
GO:0006461--P:protein complex assembly

KEGG rno:362279
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000216 Aegilops tauschii 29.09 7.50e-02 30.40
IUUC-Aml-002050 Ailuropoda melanoleuca 90.59 0.00e+00 646.00
IUUC-Apl-003829 Anas platyrhynchos 79.68 4.00e-153 533.00
IUUC-Aca-004451 Anolis carolinensis 82.30 1.00e-126 445.00
IUUC-Ame-011428 Astyanax mexicanus 81.10 1.00e-120 426.00
IUUC-Bta-013165 Bos taurus 83.38 6.00e-172 596.00
IUUC-Cja-018719 Callithrix jacchus 90.32 0.00e+00 660.00
IUUC-Cfa-020802 Canis familiaris 76.68 3.00e-147 514.00
IUUC-Cpo-021864 Cavia porcellus 90.00 2.00e-173 600.00
IUUC-Csa-023766 Chlorocebus sabaeus 90.59 0.00e+00 649.00
IUUC-Cho-024608 Choloepus hoffmanni 86.56 0.00e+00 627.00
IUUC-Dre-028158 Danio rerio 60.91 3.00e-117 415.00
IUUC-Dno-030052 Dasypus novemcinctus 89.78 0.00e+00 638.00
IUUC-Dor-030924 Dipodomys ordii 85.22 7.00e-173 599.00
IUUC-Ete-032876 Echinops telfairi 76.08 8.00e-147 513.00
IUUC-Eca-033894 Equus caballus 90.00 3.00e-175 607.00
IUUC-Eeu-034442 Erinaceus europaeus 83.60 3.00e-167 580.00
IUUC-Fca-035602 Felis catus 92.00 4.00e-177 613.00
IUUC-Fal-037422 Ficedula albicollis 83.14 7.00e-143 499.00
IUUC-Gga-040289 Gallus gallus 81.99 6.00e-152 530.00
IUUC-Gac-041720 Gasterosteus aculeatus 85.36 1.00e-117 416.00
IUUC-Ggo-045502 Gorilla gorilla 91.40 0.00e+00 659.00
IUUC-Hsa-046189 Homo sapiens 91.40 0.00e+00 659.00
IUUC-Itr-048930 Ictidomys tridecemlineatus 92.00 1.00e-178 618.00
IUUC-Kpa-049339 Komagataella pastoris 32.69 1.70e+00 27.70
IUUC-Lch-050235 Latimeria chalumnae 74.47 2.00e-143 501.00
IUUC-Loc-052534 Lepisosteus oculatus 70.05 2.00e-135 475.00
IUUC-Laf-053439 Loxodonta africana 89.25 0.00e+00 642.00
IUUC-Mcc-054945 Macaca mulatta 89.28 0.00e+00 637.00
IUUC-Meu-056703 Macropus eugenii 85.14 3.00e-164 571.00
IUUC-Mor-057134 Magnaporthe oryzae 32.93 7.90e-02 30.80
IUUC-Mga-059330 Meleagris gallopavo 81.64 1.00e-142 499.00
IUUC-Mmr-060844 Microcebus murinus 91.45 1.00e-177 615.00
IUUC-Mdo-062120 Monodelphis domestica 85.48 1.00e-177 615.00
IUUC-Mmu-064360 Mus musculus 95.97 0.00e+00 630.00
IUUC-Mpu-066914 Mustela putorius furo 90.29 3.00e-173 600.00
IUUC-Mlu-067135 Myotis lucifugus 90.29 7.00e-176 609.00
IUUC-Nle-069266 Nomascus leucogenys 91.67 0.00e+00 659.00
IUUC-Ont-071750 Oreochromis niloticus 82.63 3.00e-124 438.00
IUUC-Oan-073082 Ornithorhynchus anatinus 87.29 5.00e-171 593.00
IUUC-Ocu-074563 Oryctolagus cuniculus 88.47 4.00e-179 620.00
IUUC-Ola-086459 Oryzias latipes 62.28 3.00e-123 434.00
IUUC-Oga-089180 Otolemur garnettii 90.86 0.00e+00 652.00
IUUC-Oar-089284 Ovis aries 85.09 6.00e-156 543.00
IUUC-Ptr-090918 Pan troglodytes 91.40 0.00e+00 654.00
IUUC-Pan-092624 Papio anubis 90.59 0.00e+00 649.00
IUUC-Psi-093544 Pelodiscus sinensis 79.41 7.00e-153 533.00
IUUC-Pfo-097463 Poecilia formosa 81.89 1.00e-119 422.00
IUUC-Pab-097846 Pongo abelii 91.40 0.00e+00 659.00
IUUC-Pva-103173 Pteropus vampyrus 88.98 0.00e+00 644.00
IUUC-Sha-106608 Sarcophilus harrisii 85.75 6.00e-177 613.00
IUUC-Ssc-115788 Sus scrofa 91.13 0.00e+00 661.00
IUUC-Tgu-117327 Taeniopygia guttata 81.99 1.00e-148 518.00
IUUC-Tru-117906 Takifugu rubripes 78.12 4.00e-115 407.00
IUUC-Tsy-119156 Tarsius syrichta 87.43 3.00e-172 597.00
IUUC-Tbe-127604 Tupaia belangeri 88.29 6.00e-169 586.00
IUUC-Ttr-128716 Tursiops truncatus 90.59 0.00e+00 650.00
IUUC-Vpa-130278 Vicugna pacos 91.40 0.00e+00 652.00
IUUC-Xtr-132550 Xenopus tropicalis 74.67 4.00e-139 487.00
IUUC-Xma-133768 Xiphophorus maculatus 82.24 2.00e-122 432.00
Created Date 25-Jun-2017

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