iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ocu-074454

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAGW02005690

Gene Name

TRIM54

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOCUG00000017035.2	ENSOCUT00000017037.2	ENSOCUP00000014639.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.20e-09	38.6	26	82

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkw...........pglknssskefrCPlCr 46
           C+iCle+f++++++lpC+H  +++C + +             +  ss ++frCP Cr
   Q: 26   CPICLEMFSKPVVILPCQHNLCRKCANDVfqasnplwqsrGSSTVSSGGRFRCPSCR 82
           *************************877777778889999999999**********8 PP

Organism

Oryctolagus cuniculus

Protein Sequence
(Fasta)

MNFTVGFKPL LGDAHSMDNL EKQLICPICL EMFSKPVVIL PCQHNLCRKC ANDVFQASNP 60
LWQSRGSSTV SSGGRFRCPS CRHEVVLDRH GVYGLQRNLL VENIIDIYKQ ESSRPLHSKA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTTCA CGGTGGGTTT CAAGCCTCTG CTAGGGGATG CGCACAGCAT GGACAACCTC 60
GAGAAGCAGC TCATCTGCCC CATCTGCCTG GAGATGTTCT CCAAGCCGGT GGTGATCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR017903--COS_domain
IPR033492--TRIM54
IPR027370--Znf-RING_LisH
IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51262--COS
PS50119--ZF_BBOX
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00643--zf-B_box
PF13445--zf-RING_UBOX

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005874--C:microtubule
GO:0005875--C:microtubule associated complex
GO:0008270--F:zinc ion binding
GO:0055001--P:muscle cell development
GO:0007026--P:negative regulation of microtubule depolymerization

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002282	Ailuropoda melanoleuca	96.74	1.00e-133	469.00
IUUC-Bta-013385	Bos taurus	97.60	4.00e-178	617.00
IUUC-Cja-019697	Callithrix jacchus	78.06	5.00e-139	487.00
IUUC-Cfa-020995	Canis familiaris	97.58	4.00e-169	587.00
IUUC-Cpo-021913	Cavia porcellus	95.87	0.00e+00	677.00
IUUC-Cre-022560	Chlamydomonas reinhardtii	44.44	1.00e-05	45.40
IUUC-Csa-023342	Chlorocebus sabaeus	96.94	0.00e+00	649.00
IUUC-Cin-025224	Ciona intestinalis	52.10	4.00e-94	338.00
IUUC-Csv-026374	Ciona savignyi	51.25	4.00e-81	294.00
IUUC-Dre-027562	Danio rerio	69.19	2.00e-144	504.00
IUUC-Dno-029582	Dasypus novemcinctus	97.26	1.00e-170	592.00
IUUC-Dor-031139	Dipodomys ordii	94.74	0.00e+00	644.00
IUUC-Ete-032346	Echinops telfairi	98.03	2.00e-108	385.00
IUUC-Eca-033645	Equus caballus	97.60	1.00e-178	618.00
IUUC-Eeu-035333	Erinaceus europaeus	69.12	1.00e-115	409.00
IUUC-Fca-035865	Felis catus	97.58	0.00e+00	630.00
IUUC-Fal-036978	Ficedula albicollis	82.37	1.00e-167	582.00
IUUC-Gga-040452	Gallus gallus	78.20	2.00e-164	571.00
IUUC-Gac-042590	Gasterosteus aculeatus	62.22	8.00e-103	366.00
IUUC-Ggo-044467	Gorilla gorilla	85.07	6.00e-172	596.00
IUUC-Hsa-046379	Homo sapiens	94.72	2.00e-177	614.00
IUUC-Itr-047912	Ictidomys tridecemlineatus	94.78	0.00e+00	631.00
IUUC-Lch-050029	Latimeria chalumnae	79.57	1.00e-154	538.00
IUUC-Loc-051801	Lepisosteus oculatus	80.97	2.00e-136	478.00
IUUC-Laf-054215	Loxodonta africana	95.58	0.00e+00	668.00
IUUC-Mcc-055027	Macaca mulatta	87.06	0.00e+00	632.00
IUUC-Meu-056412	Macropus eugenii	92.20	3.00e-166	577.00
IUUC-Mmr-060920	Microcebus murinus	96.67	0.00e+00	660.00
IUUC-Mdo-062832	Monodelphis domestica	95.44	6.00e-164	570.00
IUUC-Mmu-063707	Mus musculus	94.48	2.00e-178	618.00
IUUC-Mlu-067653	Myotis lucifugus	81.04	9.00e-138	482.00
IUUC-Nle-069020	Nomascus leucogenys	96.67	0.00e+00	641.00
IUUC-Opr-070577	Ochotona princeps	78.98	5.00e-144	503.00
IUUC-Ont-072491	Oreochromis niloticus	63.11	2.00e-121	428.00
IUUC-Oan-073101	Ornithorhynchus anatinus	95.15	3.00e-172	597.00
IUUC-Oga-088361	Otolemur garnettii	99.10	4.00e-177	613.00
IUUC-Oar-089950	Ovis aries	81.08	3.00e-140	491.00
IUUC-Ptr-090785	Pan troglodytes	84.83	2.00e-171	595.00
IUUC-Pan-092344	Papio anubis	97.22	0.00e+00	652.00
IUUC-Pab-098322	Pongo abelii	93.33	2.00e-175	607.00
IUUC-Pca-100385	Procavia capensis	76.10	9.00e-123	432.00
IUUC-Rno-105134	Rattus norvegicus	94.20	0.00e+00	679.00
IUUC-Sha-106768	Sarcophilus harrisii	95.14	7.00e-177	612.00
IUUC-Tgu-117494	Taeniopygia guttata	81.06	8.00e-159	552.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence