iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-100083

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

UBIQUITIN-SPECIFIC PROTEASE 12 family protein

Genbank Nucleotide ID

CM000352

Gene Name

POPTRDRAFT_256091; POPTR_0016s06410g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0016s06410	POPTR_0016s06410.1	POPTR_0016s06410.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.00e-69	236.4	196	519

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqD 91
           +GlkN+g+tCYmNS+LQ+L++i+ +r+++ +     ++ ++++ p+g++  +lq+lf +l ++++++v+++el+k++++    +++++q+D
   Q: 196  VGLKNQGATCYMNSLLQTLYHISYFRKAVYH-----MPTTENDMPTGSIPLALQSLFFKL-QYNDTSVATKELTKSFGWDT--YDSFMQHD 278
           6******************************.....555556789***************.88999************877..67****** PP
   S: 92   aqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeet 182
           +qE+ ++l ++le+++                          k +  + +i++lF+g+  + i c + + +s+r+e+f+dl+l+v+g +  
   Q: 279  VQELNRVLCEKLEDKM--------------------------KGTVVEGTIQQLFEGHHMNYIECINVEYKSTRKESFYDLQLDVKGCR-- 341
           ****************..........................7899*******************************************.. PP
   S: 183  kkeslqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdls....pfctspe 269
              ++  +++++++ e+leg+nky+ e+  ++q+a+k + +  +P+vL l+LkRf+++  ++   kin+++efpl+Ldl+    ++++ pe
   Q: 342  ---DVYASFDKYVEVERLEGDNKYHAEEH-GLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLQLDLDrengKYLS-PE 427
           ...9**********************996.79***********************************************966555555.56 PP
   S: 270  ekqkekkkYeLiavvvHsGslssGHYvayvkn.ekgkWllfdDskVtevkeeevleetg.......................staYvlfYk 336
           ++ ++++ Y L++v+vHsG++++GHY+a+++   +++W++fdD++Vt+ + ++ lee+                        s+aY+l+Y 
   Q: 428  SDRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPtLSDQWFKFDDERVTKEDVKRALEEQYggeeelpqtnpgfnntpfkftkySNAYMLVYI 518
           66678**************************945677*************9999997779******************************8 PP
   S: 337  r 337
           r
   Q: 519  R 519
           7 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MTMMTPSPLD QEDEEMLVPH SDLVEGPQPM EVAQVEQTST VENQPVEDPP SMKFTWTIEN 60
FTRLNTKKHY SDIFIVGSYK WRVLIFPKGN NVDHLSMYLD VADSTALPYG WSRYAQFSLA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTGCTTTTG CGAGTGTCTC TTCTGGCTAC ACAGAAAAAT CCCGCTTTCG CTTCTCTTCT 60
CTTATTCTCA GTCCCTGCTC TCGTTTTCAT TCTTGTCCCT CTGATTCGCT CGATCGAACG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome

Interpro

IPR002083--MATH/TRAF_dom
IPR001394--Peptidase_C19_UCH
IPR008974--TRAF-like
IPR024729--USP7_ICP0-binding_dom
IPR029346--USP_C
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS50144--MATH
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00917--MATH
PF00443--UCH
PF14533--USP7_C2
PF12436--USP7_ICP0_bdg

SMART

SM00061--MATH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0016s06410g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002408	Ailuropoda melanoleuca	36.52	2.00e-164	573.00
IUUC-Aly-006427	Arabidopsis lyrata	87.38	0.00e+00	1955.00
IUUC-Ath-006591	Arabidopsis thaliana	86.58	0.00e+00	1913.00
IUUC-Ago-007849	Ashbya gossypii	33.36	1.00e-140	494.00
IUUC-Ate-010428	Aspergillus terreus	37.95	1.00e-176	613.00
IUUC-Bta-013192	Bos taurus	37.03	1.00e-165	577.00
IUUC-Bol-015621	Brassica oleracea	86.64	0.00e+00	1923.00
IUUC-Bra-017080	Brassica rapa	86.30	0.00e+00	1929.00
IUUC-Cel-018219	Caenorhabditis elegans	28.98	1.00e-96	347.00
IUUC-Cja-019006	Callithrix jacchus	36.62	3.00e-165	575.00
IUUC-Cpo-022320	Cavia porcellus	36.84	2.00e-164	573.00
IUUC-Cgl-026650	Colletotrichum gloeosporioides	36.40	3.00e-174	605.00
IUUC-Cme-027103	Cyanidioschyzon merolae	41.68	2.00e-123	437.00
IUUC-Dor-030611	Dipodomys ordii	49.70	4.00e-84	305.00
IUUC-Ete-033191	Echinops telfairi	36.10	5.00e-159	555.00
IUUC-Eca-034122	Equus caballus	36.52	2.00e-164	573.00
IUUC-Eeu-035292	Erinaceus europaeus	38.50	7.00e-66	245.00
IUUC-Fso-038084	Fusarium solani	35.77	2.00e-173	602.00
IUUC-Ggr-040029	Gaeumannomyces graminis	36.05	1.00e-166	580.00
IUUC-Hvu-047749	Hordeum vulgare	83.68	0.00e+00	1563.00
IUUC-Itr-047904	Ictidomys tridecemlineatus	37.76	5.00e-152	531.00
IUUC-Lpe-051543	Leersia perrieri	81.88	0.00e+00	1799.00
IUUC-Laf-053566	Loxodonta africana	36.84	1.00e-164	573.00
IUUC-Meu-056887	Macropus eugenii	29.12	4.00e-67	249.00
IUUC-Mor-057149	Magnaporthe oryzae	33.96	2.00e-165	576.00
IUUC-Mpo-057536	Magnaporthe poae	36.12	6.00e-167	581.00
IUUC-Mla-058899	Melampsora laricipopulina	38.42	0.00e+00	672.00
IUUC-Mdo-062079	Monodelphis domestica	36.84	4.00e-148	518.00
IUUC-Mmu-063678	Mus musculus	36.77	6.00e-164	571.00
IUUC-Mpu-066744	Mustela putorius furo	36.75	2.00e-164	573.00
IUUC-Ncr-068818	Neurospora crassa	36.43	0.00e+00	627.00
IUUC-Opr-071001	Ochotona princeps	36.43	6.00e-135	474.00
IUUC-Oan-073483	Ornithorhynchus anatinus	36.75	7.00e-164	570.00
IUUC-Oba-075823	Oryza barthii	80.58	0.00e+00	1764.00
IUUC-Obr-076514	Oryza brachyantha	85.66	0.00e+00	1863.00
IUUC-Ogl-077131	Oryza glaberrima	85.24	0.00e+00	1848.00
IUUC-Olo-081067	Oryza longistaminata	81.70	0.00e+00	1728.00
IUUC-Opu-083199	Oryza punctata	83.75	0.00e+00	1820.00
IUUC-Oru-085109	Oryza rufipogon	82.55	0.00e+00	1783.00
IUUC-Oga-089059	Otolemur garnettii	34.70	1.00e-141	496.00
IUUC-Pno-095020	Phaeosphaeria nodorum	35.48	4.00e-153	535.00
IUUC-Ppe-101523	Prunus persica	91.50	0.00e+00	2011.00
IUUC-Pva-102472	Pteropus vampyrus	37.21	1.00e-160	560.00
IUUC-Pgr-103463	Puccinia graminis	38.92	0.00e+00	667.00
IUUC-Ptt-103716	Puccinia triticina	38.64	2.00e-177	616.00
IUUC-Pte-104360	Pyrenophora teres	36.63	9.00e-164	570.00
IUUC-Pyt-104581	Pyrenophora triticirepentis	36.72	4.00e-163	568.00
IUUC-Sja-107690	Schizosaccharomyces japonicus	35.16	1.00e-148	520.00
IUUC-Spo-108019	Schizosaccharomyces pombe	36.23	4.00e-147	515.00
IUUC-Sit-110268	Setaria italica	84.51	0.00e+00	1855.00
IUUC-Sly-111774	Solanum lycopersicum	85.22	0.00e+00	1912.00
IUUC-Stu-112387	Solanum tuberosum	85.75	0.00e+00	1923.00
IUUC-Sar-113685	Sorex araneus	36.60	3.00e-160	558.00
IUUC-Tca-121501	Theobroma cacao	92.91	0.00e+00	2069.00
IUUC-Tre-122169	Trichoderma reesei	36.58	4.00e-171	595.00
IUUC-Tvi-122600	Trichoderma virens	36.17	2.00e-174	606.00
IUUC-Tae-125233	Triticum aestivum	84.55	0.00e+00	1883.00
IUUC-Tme-127045	Tuber melanosporum	37.94	6.00e-172	597.00
IUUC-Tbe-127696	Tupaia belangeri	43.27	2.00e-69	256.00
IUUC-Ttr-129161	Tursiops truncatus	36.75	5.00e-163	568.00
IUUC-Vda-129708	Verticillium dahliae	35.07	4.00e-171	595.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence