iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-105217

Ensembl Protein ID

ENSRNOP00000003369.6

UniProt Accession

A0A0H2UHB0; A0A0H2UHB0_RAT

Genbank Protein ID

ENSRNOP00000003369

Protein Name

TOM1-like protein 1

Genbank Nucleotide ID

AABR07030256

Gene Name

Tom1l1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000002474.7	ENSRNOT00000003369.6	ENSRNOP00000003369.6

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
UBD/Alpha-Helix/GAT	7.50e-25	87.8	199	286

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

UBD/Alpha-Helix/GAT

   S: 39   ekikkliseleevksnvkllnemlselspegeepednellqelyetckaarpkllklieeeedndellaellkanDelnqvlnkykqlk 127
           e+i+kl+sel++vk+nvk+++++l+e++p++e++ed ell++ly+t +++++++++l+   ++n++++ el+++n++ln++++ y++++
   Q: 199  EQIGKLHSELDMVKMNVKVMTAILMENTPGSENHEDIELLRKLYKTGREMQERIMDLLVV-VENEDVTVELIQVNEDLNNAILGYERFT 286
           89**********************************************************.*************************997 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MAFGKSHRDP YATSLGHLIE KATFAGVQTE DWGQFMHICD IINTTQDGPK DAVKALKKRI 60
SKNYNHKEIQ LSLSLIDMCM QNCGPSFQSL IVKKEFVKDT LVKLLNPRYT LPLETQNRIL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGTTTG GGAAGAGTCA CCGCGATCCC TACGCTACCT CTCTGGGTCA CCTCATAGGT 60
AAGGAGGCGC GGGGAGTAAC ATCCCGACTG GCTTGGGGAA TTGTGGGAGT TTTGCCGGCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0653--Protein transport
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0813--Transport

Interpro

IPR008942--ENTH_VHS
IPR004152--GAT_dom
IPR014645--TOM1
IPR027428--TOM1L1
IPR002014--VHS_dom

PROSITE

PS50909--GAT
PS50179--VHS

Pfam

PF03127--GAT
PF00790--VHS

SMART

SM00288--VHS

Gene Ontology

GO:0005829--C:cytosol
GO:0005768--C:endosome
GO:0070062--C:extracellular exosome
GO:0030295--F:protein kinase activator activity
GO:0006886--P:intracellular protein transport
GO:0045839--P:negative regulation of mitotic nuclear division
GO:0031954--P:positive regulation of protein autophosphorylation
GO:0007165--P:signal transduction

KEGG

rno:287622

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001565	Ailuropoda melanoleuca	79.66	0.00e+00	750.00
IUUC-Apl-004174	Anas platyrhynchos	52.26	3.00e-94	338.00
IUUC-Bta-012349	Bos taurus	76.94	0.00e+00	695.00
IUUC-Cja-019078	Callithrix jacchus	81.05	0.00e+00	771.00
IUUC-Cfa-020228	Canis familiaris	77.85	0.00e+00	703.00
IUUC-Cpo-021541	Cavia porcellus	73.75	0.00e+00	634.00
IUUC-Csa-024260	Chlorocebus sabaeus	79.82	0.00e+00	646.00
IUUC-Cho-025095	Choloepus hoffmanni	61.57	4.00e-154	537.00
IUUC-Dno-029738	Dasypus novemcinctus	74.69	0.00e+00	702.00
IUUC-Dor-030805	Dipodomys ordii	69.75	4.00e-178	617.00
IUUC-Ete-032525	Echinops telfairi	72.43	0.00e+00	640.00
IUUC-Eeu-034961	Erinaceus europaeus	62.09	1.00e-88	320.00
IUUC-Fca-036355	Felis catus	76.78	0.00e+00	741.00
IUUC-Fal-036691	Ficedula albicollis	50.72	1.00e-121	429.00
IUUC-Gga-040722	Gallus gallus	53.65	5.00e-122	431.00
IUUC-Ggo-044686	Gorilla gorilla	79.66	0.00e+00	721.00
IUUC-Hsa-046281	Homo sapiens	80.08	0.00e+00	723.00
IUUC-Itr-048619	Ictidomys tridecemlineatus	83.48	5.00e-165	573.00
IUUC-Lch-050448	Latimeria chalumnae	46.04	3.00e-109	388.00
IUUC-Laf-054440	Loxodonta africana	73.64	0.00e+00	682.00
IUUC-Mcc-055179	Macaca mulatta	76.19	5.00e-154	536.00
IUUC-Meu-056149	Macropus eugenii	57.95	4.00e-140	491.00
IUUC-Mga-059815	Meleagris gallopavo	56.50	3.00e-109	388.00
IUUC-Mmr-061673	Microcebus murinus	80.96	0.00e+00	739.00
IUUC-Mdo-062647	Monodelphis domestica	61.90	3.00e-161	561.00
IUUC-Mmu-063838	Mus musculus	89.71	0.00e+00	850.00
IUUC-Mpu-065968	Mustela putorius furo	77.62	0.00e+00	740.00
IUUC-Mlu-067663	Myotis lucifugus	75.47	0.00e+00	723.00
IUUC-Nle-069514	Nomascus leucogenys	80.08	0.00e+00	724.00
IUUC-Opr-070400	Ochotona princeps	69.09	5.00e-159	553.00
IUUC-Ocu-074210	Oryctolagus cuniculus	76.46	0.00e+00	698.00
IUUC-Oga-088524	Otolemur garnettii	76.31	0.00e+00	630.00
IUUC-Oar-090252	Ovis aries	75.55	0.00e+00	651.00
IUUC-Ptr-090624	Pan troglodytes	80.08	0.00e+00	721.00
IUUC-Pan-092547	Papio anubis	80.04	0.00e+00	705.00
IUUC-Psi-093440	Pelodiscus sinensis	55.22	2.00e-139	488.00
IUUC-Pab-097710	Pongo abelii	88.77	2.00e-147	514.00
IUUC-Pca-100911	Procavia capensis	67.69	1.00e-162	566.00
IUUC-Pva-102626	Pteropus vampyrus	78.20	0.00e+00	733.00
IUUC-Sha-107467	Sarcophilus harrisii	62.65	2.00e-133	469.00
IUUC-Sar-113062	Sorex araneus	66.01	3.00e-140	491.00
IUUC-Ssc-116377	Sus scrofa	72.35	0.00e+00	626.00
IUUC-Tgu-116578	Taeniopygia guttata	65.13	3.00e-81	294.00
IUUC-Tsy-119264	Tarsius syrichta	73.01	0.00e+00	629.00
IUUC-Tbe-127731	Tupaia belangeri	64.17	4.00e-79	288.00
IUUC-Ttr-128951	Tursiops truncatus	75.89	0.00e+00	686.00
IUUC-Vpa-130520	Vicugna pacos	69.87	2.00e-169	588.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence