iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095159

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545160

Gene Name

PHYPADRAFT_196684

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S271_43V6	PP1S271_43V6.1	PP1S271_43V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.20e-37	125.0	110	144
UBD/Beta-Prp	4.00e-40	138.6	67	304

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           Ht+ ++++++ +d t+++++s+D t+++WD+ +++
   Q: 110  HTNAIFDVSWiQDdTRILTASGDQTVRLWDVESHK 144
           9**********555****************98876 PP

UBD/Beta-Prp

   S: 63   dgkilvtgseDrtikvwdls............tgkc.vhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvv 144
           dg +l+ + e +++ +++ +            t k+ + ++ +h++ + ++s+ +++ +++++s d+t+r+wd+e+ + l  + +gh+g+v +++
   Q: 67   DGHMLAVADEEGFVSIFNTRlqlptfmatnyeTDKIrLKSWMAHTNAIFDVSWIQDDTRILTASGDQTVRLWDVESHKALG-VMRGHSGSVKSLC 160
           445777777778888884444444444444435555367888**************************************9.************* PP
   S: 145  vhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvysls.........................fdsngkel.vsgsldgtvklwdlqtg 212
            hp++  +++sGs D+ + lWdl+t + +   +  h ++v +++                         ++++ + l  sg+ dg vk+wd ++ 
   Q: 161  AHPSNaEIFASGSRDGSIALWDLRTSTTISGTEVTHYRPVSCVTdthlaprsknvrrrkgatysvtgvlYQQDERILaTSGAADGVVKFWDTRKL 255
           ***********************9999999999999999999999998888888777777777766766555555541589************55 PP
   S: 213  ec..vrtlnght.........dnvksvrfspnderlvsgssDgsiriWd 250
           ++  v+t   ht           ++s+  +p + rl+    D  i+++d
   Q: 256  KVpvVQTPSQHTrtsegvgrvHGITSLSQDPTSSRLIASCTDSKIYMYD 304
           5544666666665555555557888888888888888887888888776 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MATRCQHDSL FHALSTRELR PCKVRGRPHM GRLCSEGGSS GSGVLSVEHD GVPAPPLAVS 60
YSKKRGDGHM LAVADEEGFV SIFNTRLQLP TFMATNYETD KIRLKSWMAH TNAIFDVSWI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGCTCTCC TCTCGCCATC GCCATCCTCT TCGTCGCCGG GTCGCTTCTA GAGCTTCTCG 60
ATTGAATCCT CCTCATTGTT TATTGTCTGG TGATGCGCAA TAAGAGTTCT GCAGCTCTAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

ppp:PHYPADRAFT_196684

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002111	Ailuropoda melanoleuca	37.88	1.00e-63	237.00
IUUC-Atr-003097	Amborella trichopoda	44.63	5.00e-101	360.00
IUUC-Apl-004088	Anas platyrhynchos	39.24	1.00e-65	243.00
IUUC-Aca-004732	Anolis carolinensis	36.57	1.00e-61	230.00
IUUC-Aly-005686	Arabidopsis lyrata	42.92	6.00e-96	343.00
IUUC-Ath-006970	Arabidopsis thaliana	46.70	2.00e-91	328.00
IUUC-Ang-009842	Aspergillus niger	23.06	4.00e-18	85.90
IUUC-Ame-010949	Astyanax mexicanus	38.36	3.00e-63	235.00
IUUC-Bta-012333	Bos taurus	37.60	1.00e-62	233.00
IUUC-Bdi-014494	Brachypodium distachyon	44.62	9.00e-95	340.00
IUUC-Bol-015301	Brassica oleracea	45.91	1.00e-104	372.00
IUUC-Bra-017691	Brassica rapa	48.34	4.00e-104	370.00
IUUC-Cel-018498	Caenorhabditis elegans	29.41	6.00e-37	148.00
IUUC-Cja-019534	Callithrix jacchus	37.85	1.00e-61	230.00
IUUC-Cfa-020847	Canis familiaris	37.88	1.00e-63	236.00
IUUC-Cpo-021695	Cavia porcellus	38.12	7.00e-64	238.00
IUUC-Cre-022762	Chlamydomonas reinhardtii	32.65	9.00e-44	172.00
IUUC-Csa-023748	Chlorocebus sabaeus	38.16	2.00e-63	236.00
IUUC-Cho-024445	Choloepus hoffmanni	35.66	9.00e-42	164.00
IUUC-Dre-027536	Danio rerio	35.05	3.00e-66	245.00
IUUC-Dno-030035	Dasypus novemcinctus	36.49	3.00e-61	229.00
IUUC-Dor-030814	Dipodomys ordii	39.47	7.00e-23	101.00
IUUC-Dse-031354	Dothistroma septosporum	24.04	3.00e-22	99.80
IUUC-Dme-031691	Drosophila melanogaster	34.07	3.00e-52	199.00
IUUC-Ete-032814	Echinops telfairi	38.02	4.00e-35	142.00
IUUC-Eca-033332	Equus caballus	37.33	6.00e-63	234.00
IUUC-Fca-035571	Felis catus	37.88	7.00e-64	238.00
IUUC-Fal-037421	Ficedula albicollis	38.69	1.00e-64	240.00
IUUC-Fox-038069	Fusarium oxysporum	26.18	2.00e-18	87.00
IUUC-Gmo-039365	Gadus morhua	38.07	2.00e-61	229.00
IUUC-Gga-041153	Gallus gallus	39.02	1.00e-65	244.00
IUUC-Gac-041984	Gasterosteus aculeatus	36.64	8.00e-61	227.00
IUUC-Gma-043734	Glycine max	44.50	2.00e-90	325.00
IUUC-Ggo-044419	Gorilla gorilla	37.50	5.00e-62	231.00
IUUC-Hsa-045862	Homo sapiens	37.88	7.00e-63	234.00
IUUC-Hvu-047728	Hordeum vulgare	44.68	9.00e-98	349.00
IUUC-Itr-048786	Ictidomys tridecemlineatus	37.33	1.00e-62	234.00
IUUC-Lch-050616	Latimeria chalumnae	38.27	6.00e-64	238.00
IUUC-Lpe-051222	Leersia perrieri	42.42	9.00e-92	330.00
IUUC-Loc-052564	Lepisosteus oculatus	37.15	2.00e-61	229.00
IUUC-Lma-053098	Leptosphaeria maculans	25.47	2.00e-25	110.00
IUUC-Laf-053892	Loxodonta africana	37.95	6.00e-63	234.00
IUUC-Mcc-055854	Macaca mulatta	38.16	2.00e-63	236.00
IUUC-Mtr-058510	Medicago truncatula	38.16	3.00e-85	308.00
IUUC-Mla-058823	Melampsora laricipopulina	26.65	2.00e-24	106.00
IUUC-Mga-060128	Meleagris gallopavo	39.19	5.00e-65	241.00
IUUC-Mvi-060475	Microbotryum violaceum	34.99	4.00e-48	185.00
IUUC-Mmr-061331	Microcebus murinus	37.05	3.00e-62	232.00
IUUC-Mdo-063020	Monodelphis domestica	37.43	4.00e-62	232.00
IUUC-Mmu-063713	Mus musculus	37.33	6.00e-63	234.00
IUUC-Mac-064653	Musa acuminata	44.36	6.00e-107	380.00
IUUC-Mpu-066490	Mustela putorius furo	37.60	2.00e-63	236.00
IUUC-Mlu-067900	Myotis lucifugus	38.16	2.00e-63	236.00
IUUC-Ncr-068776	Neurospora crassa	28.42	4.00e-19	89.40
IUUC-Nle-069675	Nomascus leucogenys	37.65	1.00e-59	223.00
IUUC-Ont-071441	Oreochromis niloticus	37.43	2.00e-62	233.00
IUUC-Oan-072757	Ornithorhynchus anatinus	38.42	1.00e-64	240.00
IUUC-Ocu-074670	Oryctolagus cuniculus	38.44	2.00e-64	239.00
IUUC-Oba-075844	Oryza barthii	42.65	4.00e-94	338.00
IUUC-Obr-076625	Oryza brachyantha	42.18	2.00e-95	342.00
IUUC-Ogl-077771	Oryza glaberrima	42.65	3.00e-94	338.00
IUUC-Ogu-078475	Oryza glumaepatula	39.43	6.00e-79	287.00
IUUC-Oin-079958	Oryza indica	42.65	3.00e-94	338.00
IUUC-Olo-080311	Oryza longistaminata	42.75	3.00e-79	288.00
IUUC-Ome-081985	Oryza meridionalis	42.24	5.00e-93	334.00
IUUC-Oni-082921	Oryza nivara	42.65	3.00e-94	338.00
IUUC-Opu-083174	Oryza punctata	41.95	2.00e-89	322.00
IUUC-Oru-084338	Oryza rufipogon	42.65	3.00e-94	338.00
IUUC-Osa-085609	Oryza sativa	39.32	2.00e-29	122.00
IUUC-Olu-087907	Ostreococcus lucimarinus	32.27	2.00e-29	122.00
IUUC-Oga-088358	Otolemur garnettii	37.33	8.00e-63	234.00
IUUC-Oar-089994	Ovis aries	37.33	5.00e-62	231.00
IUUC-Ptr-091338	Pan troglodytes	37.88	7.00e-63	234.00
IUUC-Pan-091759	Papio anubis	38.06	1.00e-62	233.00
IUUC-Psi-093211	Pelodiscus sinensis	37.05	2.00e-60	226.00
IUUC-Pma-094588	Petromyzon marinus	36.06	1.00e-37	149.00
IUUC-Pno-094964	Phaeosphaeria nodorum	27.30	3.00e-28	119.00
IUUC-Pfo-096592	Poecilia formosa	33.69	2.00e-52	199.00
IUUC-Pab-098597	Pongo abelii	31.59	2.00e-43	170.00
IUUC-Pop-099255	Populus trichocarpa	49.23	1.00e-102	366.00
IUUC-Pca-100593	Procavia capensis	32.75	5.00e-44	172.00
IUUC-Ppe-101333	Prunus persica	44.90	2.00e-99	355.00
IUUC-Pva-102283	Pteropus vampyrus	38.24	1.00e-53	203.00
IUUC-Pgr-103383	Puccinia graminis	29.63	4.00e-24	105.00
IUUC-Ptt-103974	Puccinia triticina	29.60	7.00e-21	94.40
IUUC-Pte-104329	Pyrenophora teres	26.13	2.00e-25	110.00
IUUC-Pyt-104424	Pyrenophora triticirepentis	26.13	2.00e-25	110.00
IUUC-Rno-105720	Rattus norvegicus	35.28	2.00e-62	233.00
IUUC-Sha-106891	Sarcophilus harrisii	36.46	7.00e-57	214.00
IUUC-Sja-107723	Schizosaccharomyces japonicus	30.66	5.00e-33	134.00
IUUC-Spo-108060	Schizosaccharomyces pombe	32.17	4.00e-31	128.00
IUUC-Sit-109862	Setaria italica	43.44	2.00e-96	345.00
IUUC-Sly-111468	Solanum lycopersicum	40.91	7.00e-106	377.00
IUUC-Stu-112346	Solanum tuberosum	39.23	1.00e-103	369.00
IUUC-Sar-113734	Sorex araneus	35.76	2.00e-22	100.00
IUUC-Sbi-114076	Sorghum bicolor	41.95	2.00e-97	349.00
IUUC-Sre-114918	Sporisorium reilianum	26.29	4.00e-19	89.70
IUUC-Ssc-115561	Sus scrofa	38.06	2.00e-62	233.00
IUUC-Tgu-117011	Taeniopygia guttata	38.96	2.00e-64	239.00
IUUC-Tru-118411	Takifugu rubripes	37.23	3.00e-59	222.00
IUUC-Tsy-119367	Tarsius syrichta	32.78	4.00e-42	165.00
IUUC-Tni-120301	Tetraodon nigroviridis	35.83	7.00e-60	224.00
IUUC-Tca-121265	Theobroma cacao	45.52	1.00e-92	332.00
IUUC-Tre-121997	Trichoderma reesei	27.03	2.00e-22	100.00
IUUC-Tvi-122292	Trichoderma virens	26.90	9.00e-25	107.00
IUUC-Tae-123660	Triticum aestivum	49.23	1.00e-98	353.00
IUUC-Tur-126794	Triticum urartu	49.50	2.00e-77	281.00
IUUC-Tme-127090	Tuber melanosporum	27.69	7.00e-21	94.00
IUUC-Tbe-127646	Tupaia belangeri	35.38	1.00e-54	207.00
IUUC-Ttr-128171	Tursiops truncatus	37.88	1.00e-62	233.00
IUUC-Uma-129525	Ustilago maydis	24.38	2.00e-20	94.00
IUUC-Vda-129871	Verticillium dahliae	27.49	2.00e-23	103.00
IUUC-Vpa-130554	Vicugna pacos	37.58	3.00e-29	122.00
IUUC-Vvi-131698	Vitis vinifera	42.45	3.00e-108	384.00
IUUC-Xtr-131962	Xenopus tropicalis	36.10	7.00e-64	238.00
IUUC-Xma-133803	Xiphophorus maculatus	34.95	7.00e-58	218.00
IUUC-Zma-135693	Zea mays	41.70	5.00e-92	330.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence