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Tag Content
iUUCD ID IUUC-Lch-050421
Ensembl Protein ID ENSLACP00000015793.1
UniProt Accession H3B1M2; H3B1M2_LATCH
Genbank Protein ID ENSLACP00000015793
Protein Name Uncharacterized protein
Genbank Nucleotide ID AFYH01088144
Gene Name SEC13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLACG00000013908.1 ENSLACT00000015903.1 ENSLACP00000015793.1
ENSLACG00000013908.1 ENSLACT00000015904.1 ENSLACP00000015794.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 1.00e-27 95.2 55 87
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sd..tllvsGsdDgtikvWD 29
           gH+++v+ +a+  +   ++l+s+s+D ++ +W 
   Q: 55   GHEGPVWQVAWahPMygNILASCSYDRKVIIWK 87
           8***********9666699*************7 PP
   
Organism Latimeria chalumnae
Protein Sequence
(Fasta)
MVSVINTVDT SHEDMIHDAQ MDYYGTRLAT CSSDRSVKIF DVKNGGQILV ADLRGHEGPV 60
WQVAWAHPMY GNILASCSYD RKVIIWKEEN GTWDKMYEYT GHDSSVNSVC WAPHDFGLIL 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Lch-050421|E3,WD_repeat|Latimeria chalumnae
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CGGGGCTTCA AGGATTGACA GGAGGTTGTG TGTGTGTGTG TGGGGGGGGG ACTTCGTAGC 60
TCACAAGCCC GCGGGGCGGG GCTTCGGAAG AGTGCCCTGA GCCGGAAGTG AGCCGTGCTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Lch-050421|E3,WD_repeat|Latimeria chalumnae
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0070971--C:endoplasmic reticulum exit site
GO:0051216--P:cartilage development
GO:0055123--P:digestive system development
GO:0007029--P:endoplasmic reticulum organization
GO:0070278--P:extracellular matrix constituent secretion
GO:0042462--P:eye photoreceptor cell development
GO:0001889--P:liver development
GO:0036372--P:opsin transport
GO:0010842--P:retina layer formation
KEGG lcm:102354240
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000671 Aegilops tauschii 54.00 2.00e-92 332.00
IUUC-Aml-001832 Ailuropoda melanoleuca 89.75 5.00e-174 603.00
IUUC-Atr-002914 Amborella trichopoda 55.37 5.00e-93 333.00
IUUC-Apl-003992 Anas platyrhynchos 90.46 4.00e-168 583.00
IUUC-Aca-005283 Anolis carolinensis 90.94 6.00e-178 616.00
IUUC-Aly-005654 Arabidopsis lyrata 55.52 9.00e-92 329.00
IUUC-Ath-006816 Arabidopsis thaliana 56.19 1.00e-91 329.00
IUUC-Ago-007827 Ashbya gossypii 50.99 3.00e-83 301.00
IUUC-Acl-008205 Aspergillus clavatus 52.82 1.00e-83 302.00
IUUC-Afl-008748 Aspergillus flavus 52.44 2.00e-85 308.00
IUUC-Afu-008791 Aspergillus fumigatus 52.49 4.00e-83 301.00
IUUC-Ani-009152 Aspergillus nidulans 52.44 3.00e-85 308.00
IUUC-Ang-009765 Aspergillus niger 52.12 3.00e-86 311.00
IUUC-Aor-009927 Aspergillus oryzae 52.33 1.00e-82 299.00
IUUC-Ate-010248 Aspergillus terreus 52.44 5.00e-86 310.00
IUUC-Ame-011478 Astyanax mexicanus 89.69 2.00e-174 604.00
IUUC-Bgr-012276 Blumeria graminis 51.71 4.00e-81 294.00
IUUC-Bta-012700 Bos taurus 90.06 2.00e-173 601.00
IUUC-Bci-013722 Botrytis cinerea 50.83 1.00e-83 302.00
IUUC-Bdi-014818 Brachypodium distachyon 54.67 7.00e-93 333.00
IUUC-Bol-015779 Brassica oleracea 57.34 1.00e-91 329.00
IUUC-Bra-016973 Brassica rapa 56.51 1.00e-91 330.00
IUUC-Cel-018479 Caenorhabditis elegans 41.40 2.00e-69 255.00
IUUC-Cja-019956 Callithrix jacchus 89.58 4.00e-156 543.00
IUUC-Cfa-020752 Canis familiaris 90.06 2.00e-174 604.00
IUUC-Cpo-021871 Cavia porcellus 88.47 8.00e-171 592.00
IUUC-Cre-022797 Chlamydomonas reinhardtii 54.97 3.00e-96 344.00
IUUC-Csa-023393 Chlorocebus sabaeus 89.75 4.00e-174 603.00
IUUC-Cho-024786 Choloepus hoffmanni 70.19 2.00e-123 435.00
IUUC-Cin-025332 Ciona intestinalis 71.99 7.00e-136 476.00
IUUC-Csv-025926 Ciona savignyi 70.03 3.00e-132 464.00
IUUC-Cgl-026413 Colletotrichum gloeosporioides 52.90 1.00e-79 289.00
IUUC-Cne-027054 Cryptococcus neoformans 50.00 1.00e-78 286.00
IUUC-Cme-027165 Cyanidioschyzon merolae 35.50 8.00e-52 198.00
IUUC-Dre-027782 Danio rerio 91.25 6.00e-177 612.00
IUUC-Dno-029628 Dasypus novemcinctus 89.41 1.00e-172 598.00
IUUC-Dor-030650 Dipodomys ordii 73.21 2.00e-135 474.00
IUUC-Dse-031206 Dothistroma septosporum 49.20 6.00e-81 293.00
IUUC-Dme-031854 Drosophila melanogaster 60.26 4.00e-105 374.00
IUUC-Ete-032618 Echinops telfairi 61.99 2.00e-108 385.00
IUUC-Eca-033268 Equus caballus 90.65 3.00e-174 603.00
IUUC-Fca-035918 Felis catus 90.06 4.00e-174 603.00
IUUC-Fal-037551 Ficedula albicollis 89.87 3.00e-157 547.00
IUUC-Fox-037763 Fusarium oxysporum 50.17 3.00e-82 298.00
IUUC-Fso-038341 Fusarium solani 50.49 3.00e-81 295.00
IUUC-Gmo-038638 Gadus morhua 90.60 7.00e-175 605.00
IUUC-Ggr-039865 Gaeumannomyces graminis 49.66 1.00e-79 289.00
IUUC-Gga-040193 Gallus gallus 90.31 4.00e-176 609.00
IUUC-Gma-044311 Glycine max 55.37 2.00e-92 332.00
IUUC-Ggo-045252 Gorilla gorilla 89.44 2.00e-173 601.00
IUUC-Hsa-046565 Homo sapiens 89.13 5.00e-173 600.00
IUUC-Hvu-047835 Hordeum vulgare 55.33 4.00e-94 337.00
IUUC-Itr-048587 Ictidomys tridecemlineatus 89.41 2.00e-172 597.00
IUUC-Kpa-049148 Komagataella pastoris 52.65 1.00e-86 312.00
IUUC-Lpe-051187 Leersia perrieri 52.67 4.00e-93 336.00
IUUC-Loc-052167 Lepisosteus oculatus 92.24 7.00e-178 615.00
IUUC-Lma-053250 Leptosphaeria maculans 53.59 6.00e-83 300.00
IUUC-Laf-054304 Loxodonta africana 89.41 3.00e-172 597.00
IUUC-Mcc-055519 Macaca mulatta 89.44 1.00e-173 602.00
IUUC-Meu-056439 Macropus eugenii 90.31 1.00e-175 608.00
IUUC-Mor-057241 Magnaporthe oryzae 50.00 3.00e-79 287.00
IUUC-Mpo-057373 Magnaporthe poae 44.90 4.00e-65 240.00
IUUC-Mtr-058412 Medicago truncatula 55.37 1.00e-91 329.00
IUUC-Mla-058966 Melampsora laricipopulina 49.24 1.00e-86 312.00
IUUC-Mga-060066 Meleagris gallopavo 90.46 4.00e-168 583.00
IUUC-Mvi-060290 Microbotryum violaceum 48.01 8.00e-82 299.00
IUUC-Mmr-060717 Microcebus murinus 89.13 1.00e-172 598.00
IUUC-Mdo-062496 Monodelphis domestica 90.65 9.00e-177 612.00
IUUC-Mmu-063490 Mus musculus 89.44 1.00e-173 602.00
IUUC-Mac-065307 Musa acuminata 56.16 3.00e-90 325.00
IUUC-Mpu-066601 Mustela putorius furo 90.06 2.00e-174 604.00
IUUC-Mlu-067501 Myotis lucifugus 89.41 9.00e-173 599.00
IUUC-Nfi-068360 Neosartorya fischeri 51.50 1.00e-68 252.00
IUUC-Ncr-068928 Neurospora crassa 51.17 5.00e-84 304.00
IUUC-Nle-069028 Nomascus leucogenys 89.13 2.00e-173 601.00
IUUC-Opr-070446 Ochotona princeps 89.22 1.00e-164 571.00
IUUC-Ont-071587 Oreochromis niloticus 90.94 1.00e-175 608.00
IUUC-Oan-073211 Ornithorhynchus anatinus 88.79 1.00e-173 602.00
IUUC-Ocu-074306 Oryctolagus cuniculus 87.58 4.00e-169 586.00
IUUC-Oba-075069 Oryza barthii 54.00 2.00e-92 331.00
IUUC-Obr-076667 Oryza brachyantha 54.33 4.00e-93 334.00
IUUC-Ogl-077208 Oryza glaberrima 54.00 2.00e-92 331.00
IUUC-Ogu-078513 Oryza glumaepatula 54.00 2.00e-92 331.00
IUUC-Oin-079094 Oryza indica 54.00 2.00e-92 331.00
IUUC-Olo-080473 Oryza longistaminata 54.00 2.00e-92 331.00
IUUC-Ome-081643 Oryza meridionalis 54.00 2.00e-92 331.00
IUUC-Oni-082589 Oryza nivara 54.00 2.00e-92 331.00
IUUC-Opu-083677 Oryza punctata 53.64 2.00e-92 332.00
IUUC-Oru-084537 Oryza rufipogon 54.00 2.00e-92 331.00
IUUC-Osa-085449 Oryza sativa 54.00 2.00e-92 331.00
IUUC-Ola-087226 Oryzias latipes 91.25 4.00e-177 613.00
IUUC-Olu-087893 Ostreococcus lucimarinus 53.42 1.00e-81 295.00
IUUC-Oga-088837 Otolemur garnettii 89.75 4.00e-174 603.00
IUUC-Oar-089594 Ovis aries 89.75 3.00e-173 600.00
IUUC-Ptr-091132 Pan troglodytes 89.75 6.00e-174 602.00
IUUC-Psi-093568 Pelodiscus sinensis 91.18 3.00e-170 590.00
IUUC-Pma-094172 Petromyzon marinus 73.08 2.00e-65 241.00
IUUC-Pno-094955 Phaeosphaeria nodorum 52.65 2.00e-81 295.00
IUUC-Ppa-095578 Physcomitrella patens 55.96 6.00e-93 333.00
IUUC-Pfo-096063 Poecilia formosa 91.88 9.00e-178 615.00
IUUC-Pab-098674 Pongo abelii 89.13 1.00e-172 598.00
IUUC-Pop-099402 Populus trichocarpa 55.52 2.00e-92 331.00
IUUC-Pca-100824 Procavia capensis 71.74 7.00e-132 463.00
IUUC-Ppe-101707 Prunus persica 55.37 3.00e-90 325.00
IUUC-Pva-103161 Pteropus vampyrus 85.40 4.00e-165 573.00
IUUC-Pgr-103573 Puccinia graminis 52.74 4.00e-88 317.00
IUUC-Ptt-103700 Puccinia triticina 51.72 9.00e-82 296.00
IUUC-Pte-104267 Pyrenophora teres 52.72 2.00e-80 291.00
IUUC-Pyt-104535 Pyrenophora triticirepentis 51.70 6.00e-73 267.00
IUUC-Rno-104833 Rattus norvegicus 89.75 5.00e-174 603.00
IUUC-Sce-106437 Saccharomyces cerevisiae 50.32 3.00e-75 275.00
IUUC-Sha-106611 Sarcophilus harrisii 90.31 1.00e-175 608.00
IUUC-Sja-107654 Schizosaccharomyces japonicus 49.50 5.00e-81 293.00
IUUC-Spo-108362 Schizosaccharomyces pombe 51.16 2.00e-85 308.00
IUUC-Smo-109674 Selaginella moellendorffii 55.45 5.00e-95 340.00
IUUC-Sit-110132 Setaria italica 53.67 2.00e-92 332.00
IUUC-Sly-111852 Solanum lycopersicum 53.16 1.00e-87 315.00
IUUC-Stu-112195 Solanum tuberosum 53.49 4.00e-88 317.00
IUUC-Sbi-114229 Sorghum bicolor 53.51 1.00e-92 332.00
IUUC-Sre-114898 Sporisorium reilianum 50.43 7.00e-93 333.00
IUUC-Ssc-115995 Sus scrofa 92.05 4.00e-82 296.00
IUUC-Tgu-116793 Taeniopygia guttata 90.60 8.00e-165 572.00
IUUC-Tru-117797 Takifugu rubripes 90.28 3.00e-175 607.00
IUUC-Tsy-118967 Tarsius syrichta 96.36 2.00e-26 113.00
IUUC-Tni-120366 Tetraodon nigroviridis 89.69 3.00e-173 600.00
IUUC-Tca-121068 Theobroma cacao 55.82 2.00e-90 325.00
IUUC-Tre-121899 Trichoderma reesei 51.32 1.00e-82 299.00
IUUC-Tvi-122380 Trichoderma virens 51.82 4.00e-83 301.00
IUUC-Tae-123998 Triticum aestivum 56.00 2.00e-95 341.00
IUUC-Tur-126202 Triticum urartu 55.33 1.00e-94 339.00
IUUC-Tme-127181 Tuber melanosporum 53.90 3.00e-89 322.00
IUUC-Ttr-128448 Tursiops truncatus 78.88 4.00e-147 513.00
IUUC-Uma-129661 Ustilago maydis 50.72 3.00e-93 335.00
IUUC-Vda-129666 Verticillium dahliae 52.22 2.00e-79 288.00
IUUC-Vpa-130318 Vicugna pacos 90.37 1.00e-174 605.00
IUUC-Vvi-130868 Vitis vinifera 54.85 3.00e-91 328.00
IUUC-Xtr-131859 Xenopus tropicalis 90.00 3.00e-174 603.00
IUUC-Xma-133898 Xiphophorus maculatus 91.88 7.00e-178 615.00
IUUC-Yli-134559 Yarrowia lipolytica 52.38 1.00e-82 299.00
Created Date 25-Jun-2017

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