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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Rno-105848
UUCD1 version UUC-RaN-00206
Ensembl Protein ID ENSRNOP00000022688.5
UniProt Accession D3ZQ02; D3ZQ02_RAT
Genbank Protein ID EDL86438.1; EDL86439.1; EDL86440.1
Protein Name WD repeat domain 37; WD repeat domain 37 (Predicted), isoform CRA_a
Genbank Nucleotide ID AABR07028164; CH474097; CH474097
Gene Name Wdr37; Wdr37_predicted; rCG_29139
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000016834.7 ENSRNOT00000022688.5 ENSRNOP00000022688.5
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
dbPAF
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 8.90e-20 70.4 320 351
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlr 31
           gHtd vt+  f  ++ +vsGsdD t+kvWDl+
   Q: 320  GHTDTVTSAVFtVGDNVVSGSDDRTVKVWDLK 351
           8*******99*733669*************96 PP
   
Organism Rattus norvegicus
Protein Sequence
(Fasta)
MPTESGSCST ARQAKQKRKS HSLSIRRTNS SEQERTGLPR EMLEGQDSKL PSSVRSTLLE 60
LFGQIEREFE NLYIENLESS HSTSQLSQKL KTTYKASTSK IVSSFKTTTS RAICQLVKEY 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Rno-105848|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Nucleotide Sequence
(Fasta)
CCCAAGAGAT GGTGTTGGCG ACTCCCAGTG GACAGCTGAG ACTGCCCGCA CGTCTAGCTG 60
CTTTGCGGTG GGGAAGCTTC CTCACTGGGG AGACTTCTTG AGGAGGGGGA TCGGTCTGGT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Rno-105848|E3,WD_repeat|Rattus norvegicus
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
PRINTS

PR00320--GPROTEINBRPT
SMART

SM00320--WD40
Gene Ontology

GO:0070545--C:PeBoW complex
GO:0030687--C:preribosome, large subunit precursor
GO:0000460--P:maturation of 5.8S rRNA
GO:0000470--P:maturation of LSU-rRNA
KEGG rno:307075
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001249 Ailuropoda melanoleuca 86.29 0.00e+00 844.00
IUUC-Apl-003647 Anas platyrhynchos 85.08 0.00e+00 824.00
IUUC-Aca-004759 Anolis carolinensis 84.48 0.00e+00 833.00
IUUC-Ame-011103 Astyanax mexicanus 49.31 3.00e-114 405.00
IUUC-Bta-012718 Bos taurus 85.48 0.00e+00 836.00
IUUC-Cel-018499 Caenorhabditis elegans 39.52 6.00e-88 317.00
IUUC-Cja-019492 Callithrix jacchus 87.70 0.00e+00 878.00
IUUC-Cfa-020199 Canis familiaris 85.89 0.00e+00 874.00
IUUC-Cpo-022500 Cavia porcellus 82.26 0.00e+00 830.00
IUUC-Csa-023567 Chlorocebus sabaeus 88.31 0.00e+00 885.00
IUUC-Cho-025071 Choloepus hoffmanni 78.57 3.00e-113 402.00
IUUC-Cin-025460 Ciona intestinalis 40.30 2.00e-88 319.00
IUUC-Csv-026042 Ciona savignyi 42.79 6.00e-94 337.00
IUUC-Dre-028214 Danio rerio 75.40 0.00e+00 761.00
IUUC-Dno-029826 Dasypus novemcinctus 91.73 0.00e+00 733.00
IUUC-Dor-030967 Dipodomys ordii 86.53 0.00e+00 780.00
IUUC-Dme-031936 Drosophila melanogaster 53.93 3.00e-105 375.00
IUUC-Ete-032452 Echinops telfairi 86.69 0.00e+00 869.00
IUUC-Eca-033278 Equus caballus 87.50 0.00e+00 885.00
IUUC-Eeu-034592 Erinaceus europaeus 74.60 0.00e+00 717.00
IUUC-Fca-036431 Felis catus 86.92 0.00e+00 878.00
IUUC-Fal-037149 Ficedula albicollis 84.48 0.00e+00 820.00
IUUC-Gmo-038476 Gadus morhua 73.10 0.00e+00 678.00
IUUC-Gga-041099 Gallus gallus 85.08 0.00e+00 825.00
IUUC-Gac-042374 Gasterosteus aculeatus 77.35 0.00e+00 730.00
IUUC-Ggo-044683 Gorilla gorilla 85.28 0.00e+00 846.00
IUUC-Hsa-046658 Homo sapiens 87.50 0.00e+00 878.00
IUUC-Itr-048870 Ictidomys tridecemlineatus 87.91 0.00e+00 812.00
IUUC-Lch-050571 Latimeria chalumnae 76.47 0.00e+00 770.00
IUUC-Loc-052652 Lepisosteus oculatus 74.24 0.00e+00 756.00
IUUC-Laf-053712 Loxodonta africana 86.77 0.00e+00 881.00
IUUC-Mcc-055521 Macaca mulatta 88.31 0.00e+00 885.00
IUUC-Meu-056324 Macropus eugenii 83.87 0.00e+00 810.00
IUUC-Mga-060114 Meleagris gallopavo 85.28 0.00e+00 832.00
IUUC-Mmr-061176 Microcebus murinus 86.90 0.00e+00 872.00
IUUC-Mdo-061888 Monodelphis domestica 85.89 0.00e+00 815.00
IUUC-Mmu-063977 Mus musculus 89.92 0.00e+00 898.00
IUUC-Mpu-066220 Mustela putorius furo 71.39 1.00e-149 522.00
IUUC-Mlu-068155 Myotis lucifugus 87.70 0.00e+00 885.00
IUUC-Nle-069964 Nomascus leucogenys 87.90 0.00e+00 882.00
IUUC-Opr-070925 Ochotona princeps 78.91 5.00e-118 417.00
IUUC-Ont-071317 Oreochromis niloticus 78.43 0.00e+00 742.00
IUUC-Oan-072952 Ornithorhynchus anatinus 86.29 0.00e+00 843.00
IUUC-Ocu-073913 Oryctolagus cuniculus 88.51 0.00e+00 892.00
IUUC-Ola-087024 Oryzias latipes 77.06 0.00e+00 779.00
IUUC-Oga-087945 Otolemur garnettii 87.50 0.00e+00 887.00
IUUC-Oar-089854 Ovis aries 85.69 0.00e+00 828.00
IUUC-Ptr-091486 Pan troglodytes 87.70 0.00e+00 880.00
IUUC-Pan-091738 Papio anubis 88.31 0.00e+00 885.00
IUUC-Psi-093953 Pelodiscus sinensis 84.68 0.00e+00 826.00
IUUC-Pma-094560 Petromyzon marinus 68.52 0.00e+00 673.00
IUUC-Pfo-097222 Poecilia formosa 76.01 0.00e+00 730.00
IUUC-Pab-098778 Pongo abelii 85.45 0.00e+00 830.00
IUUC-Pca-100852 Procavia capensis 85.69 0.00e+00 847.00
IUUC-Pva-103130 Pteropus vampyrus 76.45 2.00e-99 356.00
IUUC-Sha-106750 Sarcophilus harrisii 86.09 0.00e+00 846.00
IUUC-Sar-113749 Sorex araneus 78.02 0.00e+00 763.00
IUUC-Ssc-115691 Sus scrofa 84.27 0.00e+00 815.00
IUUC-Tgu-117365 Taeniopygia guttata 82.26 0.00e+00 788.00
IUUC-Tru-117595 Takifugu rubripes 77.42 0.00e+00 735.00
IUUC-Tsy-118973 Tarsius syrichta 71.98 4.00e-142 498.00
IUUC-Tni-120545 Tetraodon nigroviridis 76.71 0.00e+00 771.00
IUUC-Tbe-127976 Tupaia belangeri 70.51 0.00e+00 664.00
IUUC-Ttr-128472 Tursiops truncatus 83.87 0.00e+00 831.00
IUUC-Xtr-132621 Xenopus tropicalis 81.65 0.00e+00 804.00
Created Date 25-Jun-2017

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