iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vda-129760

Ensembl Protein ID

EGY20813

UniProt Accession

G2XJW0; G2XJW0_VERDV

Genbank Protein ID

EGY20813.1

Protein Name

U3 small nucleolar RNA-associated protein

Genbank Nucleotide ID

DS572733

Gene Name

VDAG_10442

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VDAG_10442	EGY20813	EGY20813

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.90e-20	70.3	619	656

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H   vt++   s  +++vs+s Dg+ik WD+ tg+ll+
   Q: 619  HIKAVTGIIVdSMnKHIVSCSLDGKIKFWDFLTGRLLQ 656
           556688885676679********************998 PP

Organism

Verticillium dahliae

Protein Sequence
(Fasta)

MPHSDSDGPL SKRQKLNVAA KDVATSEQAS RIFAPFRTVG LVSPTNVPFT SIPLGKTTYQ 60
VTTSVGRALQ TYDLKRGLNL VFVTRPQTPA DITATCAWKE KVFVAWGDRS RGEDQGLWAF 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCTCACT CGGACAGCGA CGGCCCTCTG AGCAAGAGGC AGAAGCTCAA TGTTGCCGCC 60
AAAGATGTGG CCACTTCAGA ACAGGCGTCA CGCATTTTTG CCCCCTTCAG AGTATGCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR007319--SSU_processome_Utp21
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04192--Utp21
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0032040--C:small-subunit processome
GO:0006364--P:rRNA processing

KEGG

vda:VDAG_10442

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001096	Aegilops tauschii	29.45	4.00e-101	360.00
IUUC-Aml-002289	Ailuropoda melanoleuca	29.91	6.00e-99	353.00
IUUC-Atr-002859	Amborella trichopoda	26.75	2.00e-74	272.00
IUUC-Apl-003505	Anas platyrhynchos	27.80	3.00e-83	301.00
IUUC-Aca-004339	Anolis carolinensis	28.21	1.00e-93	335.00
IUUC-Aly-005913	Arabidopsis lyrata	29.61	6.00e-98	350.00
IUUC-Ath-006767	Arabidopsis thaliana	30.55	2.00e-102	365.00
IUUC-Ago-007763	Ashbya gossypii	33.71	3.00e-140	491.00
IUUC-Acl-008275	Aspergillus clavatus	52.52	0.00e+00	775.00
IUUC-Afl-008457	Aspergillus flavus	52.80	0.00e+00	723.00
IUUC-Afu-008914	Aspergillus fumigatus	52.07	0.00e+00	875.00
IUUC-Ani-009225	Aspergillus nidulans	49.28	0.00e+00	894.00
IUUC-Aor-010046	Aspergillus oryzae	52.94	0.00e+00	1054.00
IUUC-Ate-010337	Aspergillus terreus	52.91	0.00e+00	1043.00
IUUC-Ame-010963	Astyanax mexicanus	29.69	4.00e-94	337.00
IUUC-Bgr-011973	Blumeria graminis	59.31	0.00e+00	1236.00
IUUC-Bta-012462	Bos taurus	30.71	1.00e-99	356.00
IUUC-Bci-013940	Botrytis cinerea	68.33	0.00e+00	1442.00
IUUC-Bdi-014725	Brachypodium distachyon	28.93	6.00e-100	357.00
IUUC-Bol-016534	Brassica oleracea	29.01	1.00e-92	332.00
IUUC-Bra-016781	Brassica rapa	25.72	2.00e-61	229.00
IUUC-Cel-018581	Caenorhabditis elegans	24.17	2.00e-59	222.00
IUUC-Cja-019675	Callithrix jacchus	30.10	3.00e-108	384.00
IUUC-Cfa-020118	Canis familiaris	29.19	7.00e-98	350.00
IUUC-Cpo-021798	Cavia porcellus	30.06	5.00e-101	360.00
IUUC-Cre-022566	Chlamydomonas reinhardtii	25.73	3.00e-21	95.10
IUUC-Csa-023547	Chlorocebus sabaeus	29.83	4.00e-97	347.00
IUUC-Cho-024518	Choloepus hoffmanni	34.16	1.00e-53	202.00
IUUC-Cin-025339	Ciona intestinalis	27.80	6.00e-98	350.00
IUUC-Cgl-026476	Colletotrichum gloeosporioides	76.26	0.00e+00	1639.00
IUUC-Cne-026859	Cryptococcus neoformans	34.43	1.00e-134	472.00
IUUC-Cme-027173	Cyanidioschyzon merolae	24.22	1.00e-47	183.00
IUUC-Dre-027733	Danio rerio	28.08	5.00e-95	340.00
IUUC-Dno-029439	Dasypus novemcinctus	30.19	1.00e-95	342.00
IUUC-Dor-030329	Dipodomys ordii	33.20	2.00e-61	228.00
IUUC-Dse-031511	Dothistroma septosporum	52.18	0.00e+00	1043.00
IUUC-Dme-031694	Drosophila melanogaster	26.86	2.00e-85	308.00
IUUC-Ete-032930	Echinops telfairi	29.82	4.00e-71	261.00
IUUC-Eca-033302	Equus caballus	30.19	5.00e-101	360.00
IUUC-Eeu-034516	Erinaceus europaeus	29.30	2.00e-104	372.00
IUUC-Fca-036064	Felis catus	30.40	7.00e-99	353.00
IUUC-Fal-037024	Ficedula albicollis	28.30	4.00e-92	330.00
IUUC-Fox-037787	Fusarium oxysporum	73.78	0.00e+00	1565.00
IUUC-Fso-038378	Fusarium solani	73.14	0.00e+00	1548.00
IUUC-Gmo-039637	Gadus morhua	28.37	2.00e-34	139.00
IUUC-Ggr-040108	Gaeumannomyces graminis	69.62	0.00e+00	1502.00
IUUC-Gga-040982	Gallus gallus	28.53	1.00e-104	372.00
IUUC-Gac-041565	Gasterosteus aculeatus	27.81	3.00e-82	298.00
IUUC-Gma-043414	Glycine max	29.69	1.00e-100	359.00
IUUC-Ggo-045463	Gorilla gorilla	29.57	1.00e-98	352.00
IUUC-Hsa-045675	Homo sapiens	29.77	4.00e-100	357.00
IUUC-Hvu-047352	Hordeum vulgare	28.99	2.00e-91	328.00
IUUC-Itr-048088	Ictidomys tridecemlineatus	29.63	4.00e-107	380.00
IUUC-Kpa-049164	Komagataella pastoris	35.18	9.00e-148	515.00
IUUC-Lch-050476	Latimeria chalumnae	31.47	2.00e-77	282.00
IUUC-Lpe-051556	Leersia perrieri	22.77	3.00e-36	145.00
IUUC-Loc-052820	Lepisosteus oculatus	29.07	5.00e-105	373.00
IUUC-Lma-052961	Leptosphaeria maculans	56.88	0.00e+00	1098.00
IUUC-Laf-054006	Loxodonta africana	29.41	6.00e-93	333.00
IUUC-Mcc-055037	Macaca mulatta	29.67	3.00e-100	357.00
IUUC-Mor-057280	Magnaporthe oryzae	68.38	0.00e+00	1461.00
IUUC-Mpo-057408	Magnaporthe poae	70.57	0.00e+00	1480.00
IUUC-Mtr-058473	Medicago truncatula	29.87	1.00e-107	382.00
IUUC-Mla-058892	Melampsora laricipopulina	30.14	3.00e-97	347.00
IUUC-Mga-059598	Meleagris gallopavo	27.59	5.00e-72	264.00
IUUC-Mvi-060334	Microbotryum violaceum	30.69	5.00e-105	374.00
IUUC-Mmr-061239	Microcebus murinus	29.97	9.00e-98	349.00
IUUC-Mdo-062471	Monodelphis domestica	30.22	5.00e-97	347.00
IUUC-Mmu-063872	Mus musculus	29.86	4.00e-106	377.00
IUUC-Mac-064631	Musa acuminata	28.82	9.00e-84	303.00
IUUC-Mpu-066039	Mustela putorius furo	30.09	1.00e-107	382.00
IUUC-Mlu-067485	Myotis lucifugus	30.50	1.00e-99	355.00
IUUC-Nfi-068319	Neosartorya fischeri	47.43	0.00e+00	941.00
IUUC-Ncr-068725	Neurospora crassa	70.42	0.00e+00	1503.00
IUUC-Nle-069050	Nomascus leucogenys	29.82	8.00e-101	360.00
IUUC-Opr-070437	Ochotona princeps	35.11	1.00e-31	129.00
IUUC-Ont-071574	Oreochromis niloticus	29.25	6.00e-98	350.00
IUUC-Oan-072826	Ornithorhynchus anatinus	29.27	2.00e-101	361.00
IUUC-Ocu-073995	Oryctolagus cuniculus	29.57	3.00e-96	344.00
IUUC-Oba-075407	Oryza barthii	28.68	1.00e-75	276.00
IUUC-Obr-076451	Oryza brachyantha	29.81	1.00e-102	365.00
IUUC-Ogl-077535	Oryza glaberrima	28.63	2.00e-97	348.00
IUUC-Ogu-077995	Oryza glumaepatula	28.36	9.00e-75	273.00
IUUC-Oin-079431	Oryza indica	28.67	5.00e-99	353.00
IUUC-Olo-080495	Oryza longistaminata	29.46	4.00e-75	274.00
IUUC-Oni-082336	Oryza nivara	28.09	4.00e-93	333.00
IUUC-Opu-084028	Oryza punctata	28.83	5.00e-82	297.00
IUUC-Oru-084500	Oryza rufipogon	28.07	1.00e-72	266.00
IUUC-Osa-086242	Oryza sativa	28.67	8.00e-99	353.00
IUUC-Ola-086612	Oryzias latipes	29.99	4.00e-77	280.00
IUUC-Olu-087703	Ostreococcus lucimarinus	27.25	7.00e-73	266.00
IUUC-Oga-088572	Otolemur garnettii	30.59	9.00e-101	359.00
IUUC-Oar-090363	Ovis aries	30.22	2.00e-101	362.00
IUUC-Ptr-090477	Pan troglodytes	29.67	5.00e-98	350.00
IUUC-Pan-092914	Papio anubis	30.21	3.00e-100	358.00
IUUC-Psi-093019	Pelodiscus sinensis	28.11	1.00e-92	332.00
IUUC-Pma-094303	Petromyzon marinus	26.56	6.00e-70	257.00
IUUC-Pno-094938	Phaeosphaeria nodorum	59.03	0.00e+00	1025.00
IUUC-Ppa-095720	Physcomitrella patens	28.03	6.00e-88	317.00
IUUC-Pfo-097034	Poecilia formosa	28.94	8.00e-88	316.00
IUUC-Pab-097669	Pongo abelii	30.26	5.00e-100	357.00
IUUC-Pop-098835	Populus trichocarpa	29.43	9.00e-99	353.00
IUUC-Pca-101097	Procavia capensis	35.71	1.00e-39	156.00
IUUC-Ppe-101430	Prunus persica	28.87	1.00e-103	369.00
IUUC-Pva-103152	Pteropus vampyrus	30.46	3.00e-101	361.00
IUUC-Pgr-103517	Puccinia graminis	29.54	2.00e-110	392.00
IUUC-Ptt-103697	Puccinia triticina	27.70	2.00e-90	325.00
IUUC-Pte-104121	Pyrenophora teres	56.15	0.00e+00	1100.00
IUUC-Pyt-104672	Pyrenophora triticirepentis	55.88	0.00e+00	1087.00
IUUC-Rno-105435	Rattus norvegicus	30.17	4.00e-103	367.00
IUUC-Sce-106202	Saccharomyces cerevisiae	34.11	3.00e-129	454.00
IUUC-Sha-107272	Sarcophilus harrisii	30.69	2.00e-92	332.00
IUUC-Sja-107744	Schizosaccharomyces japonicus	36.60	5.00e-151	526.00
IUUC-Spo-108256	Schizosaccharomyces pombe	35.53	1.00e-154	538.00
IUUC-Ssl-108618	Sclerotinia sclerotiorum	67.02	0.00e+00	1424.00
IUUC-Smo-109445	Selaginella moellendorffii	29.30	2.00e-100	358.00
IUUC-Sit-110051	Setaria italica	28.81	1.00e-100	358.00
IUUC-Sly-111181	Solanum lycopersicum	30.17	2.00e-103	368.00
IUUC-Stu-112018	Solanum tuberosum	29.98	3.00e-103	367.00
IUUC-Sar-113348	Sorex araneus	28.86	2.00e-70	259.00
IUUC-Sbi-114282	Sorghum bicolor	29.34	2.00e-103	368.00
IUUC-Sre-114946	Sporisorium reilianum	31.57	4.00e-47	181.00
IUUC-Ssc-115287	Sus scrofa	30.28	9.00e-101	359.00
IUUC-Tgu-117138	Taeniopygia guttata	26.41	4.00e-75	274.00
IUUC-Tru-118232	Takifugu rubripes	28.97	6.00e-89	320.00
IUUC-Tsy-119502	Tarsius syrichta	36.65	1.00e-36	146.00
IUUC-Tni-120378	Tetraodon nigroviridis	28.53	3.00e-86	311.00
IUUC-Tca-121506	Theobroma cacao	28.57	1.00e-91	329.00
IUUC-Tre-122166	Trichoderma reesei	73.40	0.00e+00	1603.00
IUUC-Tvi-122385	Trichoderma virens	73.42	0.00e+00	1607.00
IUUC-Tae-122836	Triticum aestivum	29.03	6.00e-109	386.00
IUUC-Tur-126490	Triticum urartu	28.72	8.00e-80	290.00
IUUC-Tme-127157	Tuber melanosporum	40.90	0.00e+00	645.00
IUUC-Tbe-127981	Tupaia belangeri	29.90	5.00e-85	307.00
IUUC-Ttr-128886	Tursiops truncatus	29.32	7.00e-95	340.00
IUUC-Uma-129439	Ustilago maydis	29.80	6.00e-59	221.00
IUUC-Vpa-130456	Vicugna pacos	29.41	4.00e-98	351.00
IUUC-Vvi-131086	Vitis vinifera	29.50	9.00e-105	372.00
IUUC-Xtr-131829	Xenopus tropicalis	28.60	3.00e-103	367.00
IUUC-Xma-133588	Xiphophorus maculatus	28.30	2.00e-86	312.00
IUUC-Yli-134328	Yarrowia lipolytica	32.67	2.00e-128	451.00
IUUC-Zma-135808	Zea mays	29.12	7.00e-104	370.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence