iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Itr-048644

Ensembl Protein ID

ENSSTOP00000013161.2

UniProt Accession

I3MNE1; I3MNE1_ICTTR

Genbank Protein ID

ENSSTOP00000013161

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTP01025058

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSTOG00000014687.2	ENSSTOT00000014693.2	ENSSTOP00000013161.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.10e-17	60.9	125	161

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH ++++c+++  d + l s+sdD+ i  W++ t+++
   Q: 125  GHDNRINCVQWhEDsGCLYSCSDDKYIVEWNVQTCKV 161
           8**********944599*********99999888776 PP

Organism

Ictidomys tridecemlineatus

Protein Sequence
(Fasta)

AMAAGGGGSC DPLAPAGVPC AFSPDRQAYF ALASTDGHLR VWETANNRLH QEYVPSAHLS 60
GTCTCLAWAP ARLQAKESHQ RKKRKSEAVG TSDQIDLLAL GTAVGSILLY STVKGELHSK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACACGTGG CTGCCGCGGA CCCAGAACAG CAATGGCGGC GGGTGGTGGC GGTAGCTGCG 60
ACCCTCTGGC CCCTGCGGGG GTCCCCTGCG CCTTCTCCCC TGACAGACAG GCCTACTTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	92.37	0.00e+00	1101.00
IUUC-Atr-002533	Amborella trichopoda	20.26	3.00e-21	96.30
IUUC-Apl-003242	Anas platyrhynchos	73.61	0.00e+00	785.00
IUUC-Aca-004607	Anolis carolinensis	71.55	0.00e+00	864.00
IUUC-Aly-006074	Arabidopsis lyrata	25.09	4.00e-16	79.30
IUUC-Ath-007222	Arabidopsis thaliana	25.09	1.00e-15	78.20
IUUC-Ame-011014	Astyanax mexicanus	54.08	2.00e-170	592.00
IUUC-Bta-012605	Bos taurus	91.65	0.00e+00	1105.00
IUUC-Bdi-014072	Brachypodium distachyon	20.45	8.00e-21	95.10
IUUC-Bol-016255	Brassica oleracea	22.50	1.00e-23	104.00
IUUC-Bra-016850	Brassica rapa	23.95	2.00e-24	107.00
IUUC-Cja-019620	Callithrix jacchus	91.03	0.00e+00	1141.00
IUUC-Cfa-020520	Canis familiaris	92.15	0.00e+00	1113.00
IUUC-Cpo-022456	Cavia porcellus	86.95	0.00e+00	1117.00
IUUC-Cho-024726	Choloepus hoffmanni	90.00	0.00e+00	1046.00
IUUC-Cin-025761	Ciona intestinalis	35.71	9.00e-96	343.00
IUUC-Dre-028051	Danio rerio	52.41	7.00e-175	607.00
IUUC-Dno-030031	Dasypus novemcinctus	90.48	0.00e+00	1088.00
IUUC-Dme-031653	Drosophila melanogaster	27.26	4.00e-45	176.00
IUUC-Ete-032863	Echinops telfairi	77.85	1.00e-96	347.00
IUUC-Eca-033243	Equus caballus	92.02	0.00e+00	947.00
IUUC-Eeu-034970	Erinaceus europaeus	86.96	0.00e+00	785.00
IUUC-Fca-036009	Felis catus	88.38	0.00e+00	1117.00
IUUC-Fal-037264	Ficedula albicollis	71.32	0.00e+00	764.00
IUUC-Gmo-039124	Gadus morhua	56.10	2.00e-177	615.00
IUUC-Gga-040862	Gallus gallus	70.99	0.00e+00	837.00
IUUC-Gac-041468	Gasterosteus aculeatus	54.75	0.00e+00	633.00
IUUC-Gma-042795	Glycine max	19.93	3.00e-14	73.60
IUUC-Ggo-044432	Gorilla gorilla	93.82	0.00e+00	1131.00
IUUC-Hsa-047036	Homo sapiens	93.82	0.00e+00	1129.00
IUUC-Lch-049553	Latimeria chalumnae	66.08	0.00e+00	744.00
IUUC-Laf-053462	Loxodonta africana	89.82	0.00e+00	1120.00
IUUC-Mcc-055239	Macaca mulatta	90.74	0.00e+00	1132.00
IUUC-Mtr-057977	Medicago truncatula	20.78	1.00e-21	97.80
IUUC-Mga-060079	Meleagris gallopavo	72.66	0.00e+00	767.00
IUUC-Mmr-061472	Microcebus murinus	92.32	0.00e+00	1112.00
IUUC-Mdo-061972	Monodelphis domestica	76.87	0.00e+00	1018.00
IUUC-Mmu-063354	Mus musculus	89.32	0.00e+00	1075.00
IUUC-Mac-065064	Musa acuminata	22.55	1.00e-16	80.90
IUUC-Mpu-066877	Mustela putorius furo	91.65	0.00e+00	1114.00
IUUC-Mlu-067476	Myotis lucifugus	83.53	0.00e+00	1063.00
IUUC-Nle-069119	Nomascus leucogenys	91.32	0.00e+00	1144.00
IUUC-Ont-072093	Oreochromis niloticus	55.39	0.00e+00	672.00
IUUC-Oan-072944	Ornithorhynchus anatinus	77.84	0.00e+00	841.00
IUUC-Ocu-074472	Oryctolagus cuniculus	91.49	0.00e+00	1073.00
IUUC-Oba-075009	Oryza barthii	21.36	2.00e-16	80.50
IUUC-Ogl-077189	Oryza glaberrima	20.17	4.00e-16	79.30
IUUC-Oin-079064	Oryza indica	21.31	1.00e-16	80.90
IUUC-Opu-083604	Oryza punctata	21.20	8.00e-15	75.50
IUUC-Oru-084620	Oryza rufipogon	21.31	2.00e-16	80.90
IUUC-Osa-085345	Oryza sativa	21.15	6.00e-17	82.40
IUUC-Ola-086626	Oryzias latipes	54.17	0.00e+00	655.00
IUUC-Oga-087911	Otolemur garnettii	92.12	0.00e+00	1123.00
IUUC-Ptr-091603	Pan troglodytes	93.82	0.00e+00	1130.00
IUUC-Pan-092569	Papio anubis	90.74	0.00e+00	1132.00
IUUC-Pma-094287	Petromyzon marinus	52.59	0.00e+00	631.00
IUUC-Ppa-095327	Physcomitrella patens	24.92	1.00e-35	144.00
IUUC-Pfo-097292	Poecilia formosa	54.76	0.00e+00	631.00
IUUC-Pab-097878	Pongo abelii	91.36	0.00e+00	1127.00
IUUC-Pop-099418	Populus trichocarpa	22.31	1.00e-21	98.20
IUUC-Pca-100941	Procavia capensis	83.71	0.00e+00	978.00
IUUC-Ppe-101779	Prunus persica	21.24	2.00e-21	96.70
IUUC-Pva-102493	Pteropus vampyrus	80.39	0.00e+00	1013.00
IUUC-Rno-105084	Rattus norvegicus	90.32	0.00e+00	1076.00
IUUC-Sha-107486	Sarcophilus harrisii	79.67	0.00e+00	983.00
IUUC-Smo-108825	Selaginella moellendorffii	23.71	3.00e-21	96.30
IUUC-Sit-110825	Setaria italica	21.90	1.00e-21	98.20
IUUC-Sly-111365	Solanum lycopersicum	22.64	1.00e-19	91.70
IUUC-Stu-112812	Solanum tuberosum	23.20	7.00e-19	88.60
IUUC-Sar-113326	Sorex araneus	90.83	5.00e-137	481.00
IUUC-Sbi-114426	Sorghum bicolor	22.17	2.00e-24	107.00
IUUC-Tgu-116726	Taeniopygia guttata	68.64	0.00e+00	822.00
IUUC-Tru-117848	Takifugu rubripes	54.38	0.00e+00	634.00
IUUC-Tsy-119091	Tarsius syrichta	64.92	4.00e-134	471.00
IUUC-Tni-120591	Tetraodon nigroviridis	54.74	0.00e+00	634.00
IUUC-Tca-121576	Theobroma cacao	20.74	2.00e-19	90.50
IUUC-Tae-125648	Triticum aestivum	21.47	3.00e-20	93.20
IUUC-Tbe-127832	Tupaia belangeri	92.73	0.00e+00	974.00
IUUC-Ttr-128812	Tursiops truncatus	91.41	0.00e+00	955.00
IUUC-Xma-133557	Xiphophorus maculatus	54.76	0.00e+00	633.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence