iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Laf-053462

Ensembl Protein ID

ENSLAFP00000004578.4

UniProt Accession

G3SW99; G3SW99_LOXAF

Protein Name

Uncharacterized protein

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSLAFG00000005457.4	ENSLAFT00000005459.4	ENSLAFP00000004578.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-17	61.9	123	153

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gH ++v+c+++ +d ++l s+sdD+ i  W+
   Q: 123  GHDNKVNCIQWhQDnGYLYSCSDDKHIVEWN 153
           8***********777*********9987555 PP

Organism

Loxodonta africana

Protein Sequence
(Fasta)

MAAGGGGSGD PLSPAGVPCA FSPQSQAYFA LASTDGHLRV WETGNNRLHQ EYVPAHLSGT 60
CTCLAWAPAR LQAKESPQRK KRKSEAIGTS DQVDLLALGT AVGSILLYST VKGELHSKLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGCGG GCGGCGGAGG TAGCGGCGAC CCACTGTCTC CGGCGGGGGT CCCTTGTGCC 60
TTCTCCCCGC AAAGCCAGGC CTACTTTGCT TTGGCCTCTA CAGACGGTCA CCTGCGAGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR023302--Pept_S9A_N
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	92.03	0.00e+00	1109.00
IUUC-Atr-002533	Amborella trichopoda	20.42	3.00e-22	99.80
IUUC-Apl-003242	Anas platyrhynchos	72.68	0.00e+00	788.00
IUUC-Aca-004607	Anolis carolinensis	70.92	0.00e+00	851.00
IUUC-Aly-006074	Arabidopsis lyrata	23.57	1.00e-13	71.20
IUUC-Ath-007222	Arabidopsis thaliana	23.57	2.00e-13	70.50
IUUC-Ame-011014	Astyanax mexicanus	53.75	1.00e-166	580.00
IUUC-Bta-012605	Bos taurus	91.15	0.00e+00	1105.00
IUUC-Bdi-014072	Brachypodium distachyon	21.42	4.00e-20	93.20
IUUC-Bol-016255	Brassica oleracea	23.21	3.00e-22	100.00
IUUC-Bra-016850	Brassica rapa	24.79	6.00e-24	105.00
IUUC-Cja-019620	Callithrix jacchus	91.17	0.00e+00	1101.00
IUUC-Cfa-020520	Canis familiaris	90.48	0.00e+00	1103.00
IUUC-Cpo-022456	Cavia porcellus	87.19	0.00e+00	1042.00
IUUC-Cho-024726	Choloepus hoffmanni	89.83	0.00e+00	1052.00
IUUC-Cin-025761	Ciona intestinalis	36.78	3.00e-98	352.00
IUUC-Dre-028051	Danio rerio	54.88	3.00e-170	591.00
IUUC-Dno-030031	Dasypus novemcinctus	90.48	0.00e+00	1102.00
IUUC-Dme-031653	Drosophila melanogaster	26.88	1.00e-44	174.00
IUUC-Ete-032863	Echinops telfairi	85.58	2.00e-99	357.00
IUUC-Eca-033243	Equus caballus	91.63	0.00e+00	958.00
IUUC-Eeu-034970	Erinaceus europaeus	84.44	0.00e+00	777.00
IUUC-Fca-036009	Felis catus	90.51	0.00e+00	1089.00
IUUC-Fal-037264	Ficedula albicollis	70.34	0.00e+00	759.00
IUUC-Gmo-039124	Gadus morhua	56.01	8.00e-177	613.00
IUUC-Gga-040862	Gallus gallus	71.16	0.00e+00	833.00
IUUC-Gac-041468	Gasterosteus aculeatus	54.48	0.00e+00	633.00
IUUC-Gma-042795	Glycine max	21.80	4.00e-15	76.60
IUUC-Ggo-044432	Gorilla gorilla	91.33	0.00e+00	1105.00
IUUC-Hsa-047036	Homo sapiens	91.33	0.00e+00	1104.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	89.82	0.00e+00	1084.00
IUUC-Lch-049553	Latimeria chalumnae	65.61	0.00e+00	740.00
IUUC-Mcc-055239	Macaca mulatta	91.67	0.00e+00	1107.00
IUUC-Mtr-057977	Medicago truncatula	21.42	7.00e-18	85.50
IUUC-Mga-060079	Meleagris gallopavo	72.49	0.00e+00	769.00
IUUC-Mmr-061472	Microcebus murinus	89.65	0.00e+00	1091.00
IUUC-Mdo-061972	Monodelphis domestica	79.90	0.00e+00	980.00
IUUC-Mmu-063354	Mus musculus	85.31	0.00e+00	1024.00
IUUC-Mac-065064	Musa acuminata	24.36	8.00e-18	84.70
IUUC-Mpu-066877	Mustela putorius furo	89.98	0.00e+00	1101.00
IUUC-Mlu-067476	Myotis lucifugus	87.31	0.00e+00	1050.00
IUUC-Nle-069119	Nomascus leucogenys	91.33	0.00e+00	1102.00
IUUC-Ont-072093	Oreochromis niloticus	55.04	0.00e+00	670.00
IUUC-Oan-072944	Ornithorhynchus anatinus	76.97	0.00e+00	838.00
IUUC-Ocu-074472	Oryctolagus cuniculus	89.65	0.00e+00	1055.00
IUUC-Oba-075009	Oryza barthii	21.55	2.00e-16	80.90
IUUC-Ogl-077189	Oryza glaberrima	20.97	2.00e-16	80.90
IUUC-Oin-079064	Oryza indica	21.72	1.00e-16	81.30
IUUC-Opu-083604	Oryza punctata	20.34	3.00e-15	76.60
IUUC-Oru-084620	Oryza rufipogon	21.72	1.00e-16	81.30
IUUC-Osa-085345	Oryza sativa	21.55	6.00e-17	82.40
IUUC-Ola-086626	Oryzias latipes	53.99	0.00e+00	652.00
IUUC-Oga-087911	Otolemur garnettii	89.70	0.00e+00	1076.00
IUUC-Ptr-091603	Pan troglodytes	91.00	0.00e+00	1101.00
IUUC-Pan-092569	Papio anubis	91.67	0.00e+00	1107.00
IUUC-Pma-094287	Petromyzon marinus	52.50	0.00e+00	629.00
IUUC-Ppa-095327	Physcomitrella patens	26.33	1.00e-38	154.00
IUUC-Pfo-097292	Poecilia formosa	54.33	0.00e+00	627.00
IUUC-Pab-097878	Pongo abelii	91.54	0.00e+00	1088.00
IUUC-Pop-099418	Populus trichocarpa	22.80	4.00e-19	89.70
IUUC-Pca-100941	Procavia capensis	90.02	0.00e+00	1045.00
IUUC-Ppe-101779	Prunus persica	20.71	4.00e-19	89.70
IUUC-Pva-102493	Pteropus vampyrus	83.11	0.00e+00	996.00
IUUC-Rno-105084	Rattus norvegicus	87.31	0.00e+00	1032.00
IUUC-Sha-107486	Sarcophilus harrisii	79.40	0.00e+00	974.00
IUUC-Smo-108825	Selaginella moellendorffii	21.75	4.00e-19	89.70
IUUC-Sit-110825	Setaria italica	22.52	9.00e-21	95.10
IUUC-Sly-111365	Solanum lycopersicum	23.04	9.00e-20	91.70
IUUC-Stu-112812	Solanum tuberosum	23.53	3.00e-19	89.70
IUUC-Sar-113326	Sorex araneus	92.12	2.00e-137	482.00
IUUC-Sbi-114426	Sorghum bicolor	22.87	6.00e-24	105.00
IUUC-Tgu-116726	Taeniopygia guttata	67.80	0.00e+00	812.00
IUUC-Tru-117848	Takifugu rubripes	53.49	0.00e+00	627.00
IUUC-Tsy-119091	Tarsius syrichta	64.68	1.00e-134	473.00
IUUC-Tni-120591	Tetraodon nigroviridis	55.15	0.00e+00	638.00
IUUC-Tca-121576	Theobroma cacao	21.01	1.00e-17	85.10
IUUC-Tae-125648	Triticum aestivum	22.03	1.00e-19	91.70
IUUC-Tbe-127832	Tupaia belangeri	90.46	0.00e+00	954.00
IUUC-Ttr-128812	Tursiops truncatus	91.98	0.00e+00	973.00
IUUC-Xma-133557	Xiphophorus maculatus	54.50	0.00e+00	630.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence