iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-061972

Ensembl Protein ID

ENSMODP00000019402.4

UniProt Accession

F6SKM7; F6SKM7_MONDO

Protein Name

Uncharacterized protein

Gene Name

WDR43

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000015545.4	ENSMODT00000019750.4	ENSMODP00000019402.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-16	60.5	124	159

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH ++v+c+++ +d + l s+sdD+ i  W++ t++
   Q: 124  GHDNKVNCIQWhQDnDCLYSCSDDKYIVEWNTQTCR 159
           8***********66699*********9977766665 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MAASGGGRRD PLAPSGIPCA FSPRGQHYFS LAGPDGHLRV WETASSRLHQ DFVPSAHLSA 60
TCTCLAWAPP RSPAKEGPQR KKRKSEAVGT SDQVDLLAIG TAVGSILLYN TVKGELQSKL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTAACTTTGG ATAAAGAGGA CCACCACCCA CCAACCACGC CAGGGCCGGC TACAGGACCA 60
CGGTTCCCTC ATCAGCAAAA CAAGAGAAAG TCTTAACTGT CCCAAGTCCC TCCCAGTTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001650--C:fibrillar center
GO:0003723--F:RNA binding

KEGG

mdo:100031318

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	81.96	0.00e+00	966.00
IUUC-Atr-002533	Amborella trichopoda	20.51	3.00e-24	106.00
IUUC-Apl-003242	Anas platyrhynchos	75.57	0.00e+00	812.00
IUUC-Aca-004607	Anolis carolinensis	73.28	0.00e+00	880.00
IUUC-Aly-006074	Arabidopsis lyrata	23.13	4.00e-15	76.60
IUUC-Ath-007222	Arabidopsis thaliana	23.13	8.00e-15	75.50
IUUC-Ame-011014	Astyanax mexicanus	53.24	5.00e-170	591.00
IUUC-Bta-012605	Bos taurus	80.53	0.00e+00	965.00
IUUC-Bdi-014072	Brachypodium distachyon	20.86	3.00e-18	87.00
IUUC-Bol-016255	Brassica oleracea	22.63	8.00e-24	105.00
IUUC-Bra-017484	Brassica rapa	27.51	4.00e-22	99.80
IUUC-Cja-019620	Callithrix jacchus	81.70	0.00e+00	978.00
IUUC-Cfa-020520	Canis familiaris	81.56	0.00e+00	976.00
IUUC-Cpo-022456	Cavia porcellus	78.54	0.00e+00	933.00
IUUC-Cho-024726	Choloepus hoffmanni	81.42	0.00e+00	936.00
IUUC-Cin-025761	Ciona intestinalis	36.39	3.00e-97	349.00
IUUC-Dre-028051	Danio rerio	53.90	3.00e-173	601.00
IUUC-Dno-030031	Dasypus novemcinctus	81.20	0.00e+00	977.00
IUUC-Dme-031653	Drosophila melanogaster	26.96	3.00e-44	172.00
IUUC-Ete-032863	Echinops telfairi	93.71	6.00e-77	282.00
IUUC-Eca-033243	Equus caballus	79.00	0.00e+00	850.00
IUUC-Eeu-034970	Erinaceus europaeus	77.05	0.00e+00	675.00
IUUC-Fca-036009	Felis catus	81.28	0.00e+00	965.00
IUUC-Fal-037264	Ficedula albicollis	72.43	0.00e+00	786.00
IUUC-Gmo-039124	Gadus morhua	55.52	3.00e-178	618.00
IUUC-Gga-040862	Gallus gallus	73.21	0.00e+00	875.00
IUUC-Gac-041468	Gasterosteus aculeatus	54.16	0.00e+00	642.00
IUUC-Gma-042795	Glycine max	21.04	4.00e-16	80.10
IUUC-Ggo-044432	Gorilla gorilla	76.90	0.00e+00	991.00
IUUC-Hsa-047036	Homo sapiens	81.70	0.00e+00	980.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	80.67	0.00e+00	966.00
IUUC-Lch-049553	Latimeria chalumnae	67.37	0.00e+00	762.00
IUUC-Laf-053462	Loxodonta africana	79.90	0.00e+00	980.00
IUUC-Mcc-055239	Macaca mulatta	82.03	0.00e+00	985.00
IUUC-Mtr-057977	Medicago truncatula	22.62	1.00e-16	81.60
IUUC-Mga-060079	Meleagris gallopavo	74.38	0.00e+00	798.00
IUUC-Mmr-061472	Microcebus murinus	80.53	0.00e+00	979.00
IUUC-Mmu-063354	Mus musculus	77.54	0.00e+00	927.00
IUUC-Mac-065064	Musa acuminata	22.73	1.00e-17	84.30
IUUC-Mpu-066877	Mustela putorius furo	78.69	0.00e+00	991.00
IUUC-Mlu-067476	Myotis lucifugus	78.37	0.00e+00	937.00
IUUC-Nle-069119	Nomascus leucogenys	81.86	0.00e+00	980.00
IUUC-Ont-072093	Oreochromis niloticus	54.97	0.00e+00	685.00
IUUC-Oan-072944	Ornithorhynchus anatinus	74.18	0.00e+00	873.00
IUUC-Ocu-074472	Oryctolagus cuniculus	80.03	0.00e+00	944.00
IUUC-Oba-075009	Oryza barthii	22.68	2.00e-16	80.90
IUUC-Ogl-077189	Oryza glaberrima	20.33	5.00e-17	82.80
IUUC-Oin-079064	Oryza indica	22.68	3.00e-16	80.10
IUUC-Opu-083604	Oryza punctata	21.14	1.00e-15	78.20
IUUC-Oru-084620	Oryza rufipogon	22.68	6.00e-16	79.30
IUUC-Osa-085345	Oryza sativa	22.68	2.00e-16	80.90
IUUC-Ola-086626	Oryzias latipes	54.08	0.00e+00	667.00
IUUC-Oga-087911	Otolemur garnettii	78.07	0.00e+00	972.00
IUUC-Ptr-091603	Pan troglodytes	81.36	0.00e+00	978.00
IUUC-Pan-092569	Papio anubis	82.03	0.00e+00	985.00
IUUC-Pma-094287	Petromyzon marinus	51.38	3.00e-180	625.00
IUUC-Ppa-095327	Physcomitrella patens	24.70	2.00e-40	160.00
IUUC-Pfo-097292	Poecilia formosa	53.99	0.00e+00	630.00
IUUC-Pab-097878	Pongo abelii	82.09	0.00e+00	969.00
IUUC-Pop-099418	Populus trichocarpa	23.64	2.00e-15	77.80
IUUC-Pca-100941	Procavia capensis	74.65	0.00e+00	856.00
IUUC-Ppe-101779	Prunus persica	21.34	4.00e-22	99.80
IUUC-Pva-102493	Pteropus vampyrus	74.70	0.00e+00	877.00
IUUC-Rno-105084	Rattus norvegicus	78.07	0.00e+00	919.00
IUUC-Sha-107486	Sarcophilus harrisii	96.33	0.00e+00	1199.00
IUUC-Smo-108825	Selaginella moellendorffii	22.08	3.00e-22	100.00
IUUC-Sit-110825	Setaria italica	20.90	7.00e-19	89.00
IUUC-Sly-111365	Solanum lycopersicum	22.00	1.00e-18	88.20
IUUC-Stu-112812	Solanum tuberosum	21.35	1.00e-17	84.70
IUUC-Sar-113326	Sorex araneus	83.75	1.00e-126	447.00
IUUC-Sbi-114426	Sorghum bicolor	21.46	5.00e-25	109.00
IUUC-Tgu-116726	Taeniopygia guttata	72.96	0.00e+00	862.00
IUUC-Tru-117848	Takifugu rubripes	53.99	0.00e+00	641.00
IUUC-Tsy-119091	Tarsius syrichta	58.57	3.00e-116	412.00
IUUC-Tni-120591	Tetraodon nigroviridis	54.49	0.00e+00	644.00
IUUC-Tca-121576	Theobroma cacao	25.27	7.00e-18	85.50
IUUC-Tae-125105	Triticum aestivum	20.70	5.00e-17	82.80
IUUC-Tbe-127832	Tupaia belangeri	82.10	0.00e+00	852.00
IUUC-Ttr-128812	Tursiops truncatus	83.27	0.00e+00	857.00
IUUC-Xma-133557	Xiphophorus maculatus	54.16	0.00e+00	632.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence