iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Smo-108769

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-protein ligase, UFD2

Genbank Nucleotide ID

GL377692

Gene Name

UFD2-2; SELMODRAFT_162102

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
SELMODRAFT_162102	EFJ06900	EFJ06900

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	5.50e-22	78.3	941	1012

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 1    evpeeflCpIslelMrdPvvlp.sGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceen 72
           +vpeefl+pI+++lM+dPv+lp s  t+dr++I+++l s+++ +P++r+ lt ++lvPn +l++ i++++   
   Q: 941  DVPEEFLDPIQYTLMKDPVILPsSKTTIDRATIQRHLLSDQT-DPFNRSLLTADMLVPNVELKARIEEFLRNA 1012
           69********************99*****************9.**************************9765 PP

Organism

Selaginella moellendorffii

Protein Sequence
(Fasta)

MAIPKAERSL QEIEDLMLRR VLQLTLSPPA DASNAPSSNL VFLEQIAAEL MSEDRPMLLS 60
RDLIERALMD RLTTYFHARE EPLLYLIACY RRAVDEGRKS QAMKDKKSMV WIQETLNQVK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATCC CAAAGGCGGA GAGGAGCCTC CAGGAGATTG AAGATCTCAT GCTCCGCCGC 60
GTCTTGCAGC TCACTCTCTC GCCCCCAGCT GACGCGAGCA ATGCCCCTTC TTCCAATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0436--Ligase
KW-1185--Reference proteome

Interpro

IPR019474--Ub_conjug_fac_E4_core
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box
PF10408--Ufd2P_core

SMART

SM00504--Ubox

Gene Ontology

GO:0000151--C:ubiquitin ligase complex
GO:0016874--F:ligase activity
GO:0034450--F:ubiquitin-ubiquitin ligase activity
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

smo:SELMODRAFT_162102

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002396	Ailuropoda melanoleuca	28.79	5.00e-91	329.00
IUUC-Aca-004866	Anolis carolinensis	28.72	8.00e-99	354.00
IUUC-Afu-008766	Aspergillus fumigatus	28.16	6.00e-108	384.00
IUUC-Ani-009126	Aspergillus nidulans	29.13	7.00e-107	381.00
IUUC-Ang-009837	Aspergillus niger	28.32	2.00e-105	376.00
IUUC-Aor-009919	Aspergillus oryzae	27.46	2.00e-97	349.00
IUUC-Ate-010300	Aspergillus terreus	27.35	2.00e-99	357.00
IUUC-Ame-011355	Astyanax mexicanus	30.02	4.00e-102	365.00
IUUC-Bgr-011995	Blumeria graminis	27.31	7.00e-102	364.00
IUUC-Bta-013056	Bos taurus	28.90	9.00e-91	328.00
IUUC-Bci-013605	Botrytis cinerea	28.80	9.00e-105	374.00
IUUC-Cja-018872	Callithrix jacchus	28.67	3.00e-91	329.00
IUUC-Cfa-020045	Canis familiaris	28.79	9.00e-92	331.00
IUUC-Cpo-022309	Cavia porcellus	28.82	8.00e-93	334.00
IUUC-Csa-023765	Chlorocebus sabaeus	38.51	3.00e-76	279.00
IUUC-Cho-024614	Choloepus hoffmanni	38.90	5.00e-71	262.00
IUUC-Cne-027098	Cryptococcus neoformans	28.74	1.00e-110	394.00
IUUC-Cme-027352	Cyanidioschyzon merolae	29.12	1.00e-91	331.00
IUUC-Dre-027979	Danio rerio	29.66	9.00e-92	331.00
IUUC-Dno-029282	Dasypus novemcinctus	28.57	2.00e-90	327.00
IUUC-Dor-030421	Dipodomys ordii	35.20	2.00e-65	243.00
IUUC-Dse-031393	Dothistroma septosporum	26.96	2.00e-98	353.00
IUUC-Ete-032519	Echinops telfairi	39.88	1.00e-58	221.00
IUUC-Eca-033778	Equus caballus	28.34	1.00e-89	324.00
IUUC-Fca-035658	Felis catus	28.76	2.00e-90	327.00
IUUC-Fal-037638	Ficedula albicollis	29.25	8.00e-97	348.00
IUUC-Fso-038406	Fusarium solani	27.74	1.00e-96	348.00
IUUC-Gmo-039379	Gadus morhua	28.94	7.00e-95	341.00
IUUC-Gga-041136	Gallus gallus	29.11	7.00e-97	348.00
IUUC-Gac-041910	Gasterosteus aculeatus	29.50	1.00e-94	340.00
IUUC-Gma-043995	Glycine max	55.58	0.00e+00	1114.00
IUUC-Ggo-044685	Gorilla gorilla	31.27	2.00e-85	310.00
IUUC-Itr-048469	Ictidomys tridecemlineatus	38.14	3.00e-76	278.00
IUUC-Kpa-049211	Komagataella pastoris	34.38	2.00e-69	256.00
IUUC-Lpe-051022	Leersia perrieri	53.66	0.00e+00	936.00
IUUC-Loc-052622	Lepisosteus oculatus	29.27	5.00e-96	345.00
IUUC-Laf-053646	Loxodonta africana	29.12	4.00e-90	325.00
IUUC-Meu-055991	Macropus eugenii	28.41	9.00e-85	307.00
IUUC-Mor-057064	Magnaporthe oryzae	26.21	2.00e-95	343.00
IUUC-Mga-059497	Meleagris gallopavo	29.11	1.00e-96	347.00
IUUC-Mvi-060343	Microbotryum violaceum	31.02	2.00e-117	416.00
IUUC-Mmr-061173	Microcebus murinus	36.93	4.00e-79	289.00
IUUC-Mdo-062102	Monodelphis domestica	29.41	2.00e-96	346.00
IUUC-Mmu-063223	Mus musculus	28.82	1.00e-93	337.00
IUUC-Mac-065531	Musa acuminata	52.00	0.00e+00	1031.00
IUUC-Mpu-066444	Mustela putorius furo	28.24	4.00e-80	292.00
IUUC-Mlu-068018	Myotis lucifugus	28.97	1.00e-90	327.00
IUUC-Nle-069605	Nomascus leucogenys	28.32	5.00e-90	325.00
IUUC-Ont-072304	Oreochromis niloticus	29.55	3.00e-87	316.00
IUUC-Oan-073114	Ornithorhynchus anatinus	29.02	5.00e-86	311.00
IUUC-Ocu-074910	Oryctolagus cuniculus	29.31	9.00e-95	341.00
IUUC-Oba-075073	Oryza barthii	58.03	0.00e+00	964.00
IUUC-Obr-076452	Oryza brachyantha	52.41	0.00e+00	967.00
IUUC-Ogl-077141	Oryza glaberrima	52.25	0.00e+00	1008.00
IUUC-Ogu-078116	Oryza glumaepatula	52.25	0.00e+00	1006.00
IUUC-Oin-079066	Oryza indica	52.25	0.00e+00	1009.00
IUUC-Olo-080253	Oryza longistaminata	55.21	0.00e+00	898.00
IUUC-Ome-081263	Oryza meridionalis	52.25	0.00e+00	1005.00
IUUC-Oni-082019	Oryza nivara	52.35	0.00e+00	1007.00
IUUC-Opu-083558	Oryza punctata	52.20	0.00e+00	999.00
IUUC-Oru-085002	Oryza rufipogon	52.25	0.00e+00	1007.00
IUUC-Osa-085980	Oryza sativa	52.44	0.00e+00	1019.00
IUUC-Ola-086323	Oryzias latipes	30.93	2.00e-92	333.00
IUUC-Oga-087969	Otolemur garnettii	31.03	4.00e-85	309.00
IUUC-Oar-090020	Ovis aries	28.44	2.00e-89	323.00
IUUC-Ptr-091589	Pan troglodytes	28.57	7.00e-91	328.00
IUUC-Pan-092271	Papio anubis	28.69	2.00e-86	313.00
IUUC-Psi-093013	Pelodiscus sinensis	29.15	6.00e-95	342.00
IUUC-Pma-094627	Petromyzon marinus	39.29	8.00e-79	286.00
IUUC-Ppa-095989	Physcomitrella patens	59.39	0.00e+00	1148.00
IUUC-Pfo-096436	Poecilia formosa	29.79	4.00e-95	342.00
IUUC-Pab-098069	Pongo abelii	38.10	1.00e-74	274.00
IUUC-Pca-100762	Procavia capensis	35.88	2.00e-69	256.00
IUUC-Ppe-101230	Prunus persica	55.71	0.00e+00	1105.00
IUUC-Pva-102459	Pteropus vampyrus	30.95	7.00e-88	318.00
IUUC-Pgr-103485	Puccinia graminis	31.00	2.00e-113	403.00
IUUC-Ptt-104001	Puccinia triticina	34.25	4.00e-31	129.00
IUUC-Pte-104084	Pyrenophora teres	28.12	2.00e-111	396.00
IUUC-Rno-105719	Rattus norvegicus	28.78	4.00e-95	342.00
IUUC-Sce-106135	Saccharomyces cerevisiae	35.07	8.00e-68	251.00
IUUC-Sha-106760	Sarcophilus harrisii	29.29	8.00e-96	344.00
IUUC-Sja-107698	Schizosaccharomyces japonicus	29.73	2.00e-94	339.00
IUUC-Ssl-108624	Sclerotinia sclerotiorum	28.52	2.00e-108	386.00
IUUC-Sit-109949	Setaria italica	50.74	0.00e+00	904.00
IUUC-Sar-113131	Sorex araneus	35.90	1.00e-63	237.00
IUUC-Sbi-113828	Sorghum bicolor	50.15	0.00e+00	937.00
IUUC-Sre-114967	Sporisorium reilianum	32.60	3.00e-115	409.00
IUUC-Ssc-115841	Sus scrofa	28.61	1.00e-86	313.00
IUUC-Tgu-117290	Taeniopygia guttata	29.09	5.00e-96	345.00
IUUC-Tru-118193	Takifugu rubripes	29.62	4.00e-90	326.00
IUUC-Tni-120862	Tetraodon nigroviridis	29.00	2.00e-90	326.00
IUUC-Tme-127074	Tuber melanosporum	28.05	2.00e-92	333.00
IUUC-Tbe-127533	Tupaia belangeri	30.95	8.00e-90	325.00
IUUC-Ttr-128757	Tursiops truncatus	28.57	9.00e-89	321.00
IUUC-Vda-129901	Verticillium dahliae	28.05	3.00e-106	379.00
IUUC-Vpa-130215	Vicugna pacos	28.61	4.00e-85	309.00
IUUC-Vvi-130891	Vitis vinifera	55.56	0.00e+00	1091.00
IUUC-Xtr-132364	Xenopus tropicalis	29.28	4.00e-95	342.00
IUUC-Xma-133772	Xiphophorus maculatus	29.69	2.00e-94	340.00
IUUC-Yli-134506	Yarrowia lipolytica	27.46	1.00e-86	314.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence