iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pyt-104622

Ensembl Protein ID

EDU46486

UniProt Accession

B2W2K0; B2W2K0_PYRTR

Genbank Protein ID

EDU46486.1

Protein Name

DNA polymerase alpha accessory factor Mcl1

Genbank Nucleotide ID

DS231617

Gene Name

PTRG_03648

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTRG_03648	EDU46486	EDU46486

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.30e-12	44.4	229	267

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHt+++t+ a+ ++  llv+ s D ++ +WD++t++ lk
   Q: 229  GHTADITAAAWsPNgALLVTTSSDLSLNLWDTKTQKILK 267
           8***********77799****************999876 PP

Organism

Pyrenophora triticirepentis

Protein Sequence
(Fasta)

MAANQRMRAR QAHAPGPTYL AYTPDGKKLV TAGVDDYCRV FTTGSDDEPV TIDDCQENNT 60
AVVAGNDFFI TGSEDGTVSR FSLESAKFEE ILVRTTLPVR DVALSSDGKW VAVGSDELSV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCCGCAA ATCAACGAAT GCGCGCTCGC CAGGCTCGTA TGTATTTTGT GATACTGCTG 60
TGGATTTGCA AAGGCTAATT GGACTCCTCA GATGCCCCTG GCCCAACTTA TCTCGCATAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR022100--Mcl1_mid
IPR023302--Pept_S9A_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF12341--Mcl1_mid

SMART

SM00320--WD40

Gene Ontology

GO:0000775--C:chromosome, centromeric region
GO:0000790--C:nuclear chromatin
GO:0043596--C:nuclear replication fork
GO:0005654--C:nucleoplasm
GO:0006974--P:cellular response to DNA damage stimulus
GO:0061641--P:CENP-A containing chromatin organization
GO:0030702--P:chromatin silencing at centromere
GO:1903461--P:Okazaki fragment processing involved in mitotic DNA replication

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000357	Aegilops tauschii	26.68	6.00e-42	164.00
IUUC-Aml-001369	Ailuropoda melanoleuca	23.96	4.00e-41	162.00
IUUC-Atr-002987	Amborella trichopoda	25.33	3.00e-46	178.00
IUUC-Apl-003331	Anas platyrhynchos	25.23	6.00e-46	177.00
IUUC-Aca-004285	Anolis carolinensis	25.23	1.00e-41	163.00
IUUC-Aly-005907	Arabidopsis lyrata	26.27	7.00e-51	194.00
IUUC-Ath-007037	Arabidopsis thaliana	25.49	5.00e-47	181.00
IUUC-Acl-008185	Aspergillus clavatus	48.02	0.00e+00	791.00
IUUC-Afl-008630	Aspergillus flavus	49.20	0.00e+00	784.00
IUUC-Afu-008921	Aspergillus fumigatus	50.06	0.00e+00	809.00
IUUC-Ani-009243	Aspergillus nidulans	47.76	0.00e+00	755.00
IUUC-Ang-009860	Aspergillus niger	49.09	0.00e+00	728.00
IUUC-Aor-010029	Aspergillus oryzae	49.20	0.00e+00	784.00
IUUC-Ate-010570	Aspergillus terreus	49.89	0.00e+00	824.00
IUUC-Bgr-012205	Blumeria graminis	47.35	0.00e+00	795.00
IUUC-Bta-012495	Bos taurus	24.12	4.00e-40	158.00
IUUC-Bci-013848	Botrytis cinerea	50.34	0.00e+00	825.00
IUUC-Bdi-014162	Brachypodium distachyon	26.17	2.00e-45	176.00
IUUC-Bol-015828	Brassica oleracea	26.65	1.00e-44	173.00
IUUC-Bra-016792	Brassica rapa	26.31	5.00e-45	174.00
IUUC-Cja-018995	Callithrix jacchus	23.46	1.00e-39	157.00
IUUC-Cfa-020713	Canis familiaris	23.34	4.00e-31	128.00
IUUC-Cpo-021596	Cavia porcellus	24.34	7.00e-35	141.00
IUUC-Cre-022785	Chlamydomonas reinhardtii	24.50	1.00e-16	80.50
IUUC-Csa-024080	Chlorocebus sabaeus	22.87	5.00e-38	151.00
IUUC-Cho-024295	Choloepus hoffmanni	22.54	8.00e-16	77.80
IUUC-Cin-025123	Ciona intestinalis	26.11	5.00e-26	111.00
IUUC-Csv-025859	Ciona savignyi	24.84	3.00e-19	89.40
IUUC-Cgl-026546	Colletotrichum gloeosporioides	48.96	0.00e+00	706.00
IUUC-Cne-026873	Cryptococcus neoformans	29.80	6.00e-40	157.00
IUUC-Dre-028752	Danio rerio	27.52	3.00e-25	108.00
IUUC-Dno-029844	Dasypus novemcinctus	23.96	2.00e-37	149.00
IUUC-Dse-031515	Dothistroma septosporum	50.74	0.00e+00	827.00
IUUC-Eca-033665	Equus caballus	24.77	9.00e-41	160.00
IUUC-Fca-036209	Felis catus	23.47	2.00e-37	150.00
IUUC-Fal-037229	Ficedula albicollis	23.01	1.00e-42	167.00
IUUC-Fox-037686	Fusarium oxysporum	50.42	7.00e-106	375.00
IUUC-Fso-038120	Fusarium solani	48.86	0.00e+00	805.00
IUUC-Gmo-039627	Gadus morhua	27.21	9.00e-25	107.00
IUUC-Ggr-040058	Gaeumannomyces graminis	49.55	0.00e+00	728.00
IUUC-Gga-040825	Gallus gallus	24.42	5.00e-43	168.00
IUUC-Gac-042000	Gasterosteus aculeatus	26.90	5.00e-23	102.00
IUUC-Gma-042961	Glycine max	25.88	4.00e-49	188.00
IUUC-Ggo-044531	Gorilla gorilla	23.19	8.00e-41	160.00
IUUC-Hsa-046362	Homo sapiens	22.97	5.00e-40	158.00
IUUC-Hvu-047719	Hordeum vulgare	25.81	4.00e-41	161.00
IUUC-Itr-048089	Ictidomys tridecemlineatus	25.25	5.00e-22	97.10
IUUC-Lch-050106	Latimeria chalumnae	24.14	5.00e-37	148.00
IUUC-Lpe-050996	Leersia perrieri	26.16	1.00e-46	179.00
IUUC-Loc-051766	Lepisosteus oculatus	26.94	2.00e-24	106.00
IUUC-Lma-053144	Leptosphaeria maculans	78.72	0.00e+00	1357.00
IUUC-Laf-054285	Loxodonta africana	25.13	3.00e-38	152.00
IUUC-Mcc-054702	Macaca mulatta	23.08	2.00e-40	159.00
IUUC-Meu-056634	Macropus eugenii	25.52	2.00e-10	59.70
IUUC-Mor-057040	Magnaporthe oryzae	49.60	0.00e+00	784.00
IUUC-Mpo-057395	Magnaporthe poae	49.06	0.00e+00	739.00
IUUC-Mtr-057830	Medicago truncatula	26.06	2.00e-53	202.00
IUUC-Mla-059152	Melampsora laricipopulina	24.93	8.00e-45	174.00
IUUC-Mga-059492	Meleagris gallopavo	22.91	9.00e-45	174.00
IUUC-Mvi-060303	Microbotryum violaceum	32.10	8.00e-33	134.00
IUUC-Mmr-061066	Microcebus murinus	23.09	1.00e-39	157.00
IUUC-Mdo-062039	Monodelphis domestica	23.30	4.00e-42	165.00
IUUC-Mmu-063620	Mus musculus	22.80	9.00e-32	130.00
IUUC-Mac-065638	Musa acuminata	32.31	4.00e-27	115.00
IUUC-Mpu-066212	Mustela putorius furo	23.77	1.00e-41	163.00
IUUC-Mlu-068167	Myotis lucifugus	23.96	1.00e-41	163.00
IUUC-Nfi-068338	Neosartorya fischeri	49.83	0.00e+00	812.00
IUUC-Ncr-068798	Neurospora crassa	49.61	0.00e+00	784.00
IUUC-Nle-069987	Nomascus leucogenys	23.19	2.00e-41	162.00
IUUC-Ont-072317	Oreochromis niloticus	24.61	1.00e-42	167.00
IUUC-Ocu-074529	Oryctolagus cuniculus	24.31	3.00e-42	166.00
IUUC-Oba-075044	Oryza barthii	25.15	3.00e-39	155.00
IUUC-Obr-076499	Oryza brachyantha	25.66	7.00e-41	160.00
IUUC-Ogl-077757	Oryza glaberrima	25.00	2.00e-39	156.00
IUUC-Ogu-078878	Oryza glumaepatula	25.15	2.00e-39	156.00
IUUC-Oin-079900	Oryza indica	25.15	2.00e-39	156.00
IUUC-Olo-080741	Oryza longistaminata	25.15	3.00e-39	155.00
IUUC-Ome-081734	Oryza meridionalis	25.15	4.00e-39	155.00
IUUC-Oni-082656	Oryza nivara	25.15	4.00e-39	155.00
IUUC-Opu-083312	Oryza punctata	25.11	5.00e-40	157.00
IUUC-Oru-084507	Oryza rufipogon	25.15	1.00e-39	157.00
IUUC-Osa-085329	Oryza sativa	24.96	3.00e-33	135.00
IUUC-Ola-086433	Oryzias latipes	26.00	5.00e-21	94.70
IUUC-Olu-087690	Ostreococcus lucimarinus	30.83	1.00e-27	116.00
IUUC-Oga-088410	Otolemur garnettii	23.75	2.00e-39	156.00
IUUC-Oar-089993	Ovis aries	24.31	2.00e-39	155.00
IUUC-Ptr-091145	Pan troglodytes	23.46	4.00e-43	168.00
IUUC-Pan-092500	Papio anubis	22.96	1.00e-40	160.00
IUUC-Psi-093984	Pelodiscus sinensis	22.84	5.00e-45	174.00
IUUC-Pma-094567	Petromyzon marinus	24.34	1.00e-23	102.00
IUUC-Pno-095002	Phaeosphaeria nodorum	77.14	0.00e+00	1261.00
IUUC-Pfo-097387	Poecilia formosa	27.33	2.00e-18	86.30
IUUC-Pab-097803	Pongo abelii	22.86	7.00e-39	154.00
IUUC-Pop-099165	Populus trichocarpa	27.37	1.00e-50	193.00
IUUC-Pca-100989	Procavia capensis	26.09	2.00e-11	63.20
IUUC-Ppe-102022	Prunus persica	26.85	3.00e-50	192.00
IUUC-Pva-102389	Pteropus vampyrus	22.96	1.00e-25	110.00
IUUC-Pgr-103635	Puccinia graminis	25.21	3.00e-51	195.00
IUUC-Ptt-103730	Puccinia triticina	24.87	2.00e-51	196.00
IUUC-Pte-104320	Pyrenophora teres	96.38	0.00e+00	1631.00
IUUC-Rno-105689	Rattus norvegicus	23.58	3.00e-37	149.00
IUUC-Sha-107448	Sarcophilus harrisii	23.31	9.00e-42	164.00
IUUC-Sja-107702	Schizosaccharomyces japonicus	36.92	1.00e-126	445.00
IUUC-Spo-108360	Schizosaccharomyces pombe	37.04	5.00e-129	453.00
IUUC-Ssl-108529	Sclerotinia sclerotiorum	50.47	0.00e+00	795.00
IUUC-Smo-109178	Selaginella moellendorffii	27.55	6.00e-48	184.00
IUUC-Sit-110790	Setaria italica	24.26	4.00e-37	148.00
IUUC-Sly-111470	Solanum lycopersicum	29.14	7.00e-57	214.00
IUUC-Stu-111945	Solanum tuberosum	28.30	1.00e-56	213.00
IUUC-Sar-113075	Sorex araneus	23.60	1.00e-16	80.50
IUUC-Sbi-114822	Sorghum bicolor	24.34	3.00e-40	158.00
IUUC-Sre-114913	Sporisorium reilianum	27.42	2.00e-48	186.00
IUUC-Ssc-116073	Sus scrofa	22.74	2.00e-31	129.00
IUUC-Tgu-117253	Taeniopygia guttata	24.40	2.00e-45	176.00
IUUC-Tru-117741	Takifugu rubripes	24.47	3.00e-44	172.00
IUUC-Tsy-118834	Tarsius syrichta	26.32	4.00e-17	82.00
IUUC-Tni-120726	Tetraodon nigroviridis	24.87	8.00e-45	174.00
IUUC-Tca-121655	Theobroma cacao	28.18	1.00e-52	199.00
IUUC-Tre-121921	Trichoderma reesei	49.83	0.00e+00	775.00
IUUC-Tvi-122540	Trichoderma virens	50.06	0.00e+00	778.00
IUUC-Tae-123225	Triticum aestivum	26.11	2.00e-43	169.00
IUUC-Tur-126398	Triticum urartu	26.53	2.00e-42	166.00
IUUC-Tme-127075	Tuber melanosporum	47.71	0.00e+00	684.00
IUUC-Tbe-128002	Tupaia belangeri	23.79	6.00e-19	88.20
IUUC-Ttr-129101	Tursiops truncatus	23.80	1.00e-40	160.00
IUUC-Uma-129374	Ustilago maydis	27.73	8.00e-33	134.00
IUUC-Vda-129719	Verticillium dahliae	47.68	0.00e+00	744.00
IUUC-Vpa-130039	Vicugna pacos	24.16	2.00e-38	153.00
IUUC-Vvi-131442	Vitis vinifera	25.36	3.00e-40	159.00
IUUC-Xtr-132599	Xenopus tropicalis	24.48	2.00e-45	176.00
IUUC-Xma-132991	Xiphophorus maculatus	24.37	7.00e-38	150.00
IUUC-Zma-135846	Zea mays	25.29	8.00e-39	154.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence