iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptt-103929

Ensembl Protein ID

PTTG_03510P0

UniProt Accession

A0A180GWV3; A0A180GWV3_PUCT1

Genbank Protein ID

OAV96849.1

Protein Name

Ribosome biogenesis protein ERB1; Eukaryotic ribosome biogenesis protein 1

Genbank Nucleotide ID

ADAS02000017

Gene Name

ERB1; PTTG_03510

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTTG_03510	PTTG_03510T0	PTTG_03510P0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.80e-10	38.1	557	590

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           +++ ++  ++   +++GsdDg+++vW+ + g++ 
   Q: 557  RIRTVSIdPTgMWVATGSDDGQVRVWECKVGRCA 590
           58888888665779*************9999986 PP

Organism

Puccinia triticina

Functional Description
(View)

Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.

Protein Sequence
(Fasta)

MNWRTFFAIW SHCSLLWSVG GPGYGKFVQA STSTTAQEFC QQSKPAAYCD LVMAPKPSIK 60
PKNKSTDRKN AGPKPSSSQT QQKPSQRTNS ELQRKSKTKI QPSKKAPVVV RPISPEEKEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAACTGGA GGACTTTCTT TGCAATCTGG AGCCACTGCA GGTATTGCTT TAGGTTAGGA 60
AAAACATTGT GATTAAATGC AAGGAGGTTC AGATCTGGTT CTGCAGGGCC TGTAGATCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0690--Ribosome biogenesis
KW-0698--rRNA processing
KW-0732--Signal
KW-0853--WD repeat

Interpro

IPR028598--BOP1/Erb1
IPR012953--BOP1_N_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08145--BOP1NT
PF00400--WD40

SMART

SM01035--BOP1NT
SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0005654--C:nucleoplasm
GO:0030687--C:preribosome, large subunit precursor
GO:0043021--F:ribonucleoprotein complex binding
GO:0000466--P:maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463--P:maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-001158	Aegilops tauschii	40.00	8.00e-112	395.00
IUUC-Aml-001507	Ailuropoda melanoleuca	44.43	1.00e-146	511.00
IUUC-Atr-003141	Amborella trichopoda	40.00	6.00e-78	282.00
IUUC-Apl-003545	Anas platyrhynchos	42.66	5.00e-133	466.00
IUUC-Aly-005649	Arabidopsis lyrata	43.09	1.00e-135	475.00
IUUC-Ath-007625	Arabidopsis thaliana	43.58	6.00e-131	459.00
IUUC-Ago-007958	Ashbya gossypii	49.24	4.00e-178	616.00
IUUC-Acl-008344	Aspergillus clavatus	49.01	6.00e-161	559.00
IUUC-Afl-008616	Aspergillus flavus	49.17	2.00e-163	566.00
IUUC-Afu-009083	Aspergillus fumigatus	49.01	7.00e-156	542.00
IUUC-Ani-009365	Aspergillus nidulans	49.32	3.00e-165	573.00
IUUC-Ang-009796	Aspergillus niger	49.62	2.00e-163	566.00
IUUC-Aor-010015	Aspergillus oryzae	49.17	2.00e-163	567.00
IUUC-Ate-010537	Aspergillus terreus	49.70	4.00e-167	579.00
IUUC-Ame-011767	Astyanax mexicanus	51.12	1.00e-68	250.00
IUUC-Bgr-012286	Blumeria graminis	48.65	2.00e-169	587.00
IUUC-Bta-013569	Bos taurus	45.86	6.00e-156	542.00
IUUC-Bci-013820	Botrytis cinerea	48.01	4.00e-158	549.00
IUUC-Bdi-014477	Brachypodium distachyon	41.96	2.00e-128	451.00
IUUC-Bol-016099	Brassica oleracea	44.10	2.00e-136	477.00
IUUC-Bra-017174	Brassica rapa	43.94	4.00e-136	477.00
IUUC-Cel-018201	Caenorhabditis elegans	40.10	2.00e-119	421.00
IUUC-Cja-019009	Callithrix jacchus	39.90	4.00e-130	456.00
IUUC-Cfa-020173	Canis familiaris	44.39	6.00e-148	515.00
IUUC-Cpo-021796	Cavia porcellus	46.74	2.00e-157	546.00
IUUC-Cre-022650	Chlamydomonas reinhardtii	41.48	2.00e-135	473.00
IUUC-Csa-023440	Chlorocebus sabaeus	45.93	3.00e-162	563.00
IUUC-Cin-025782	Ciona intestinalis	43.17	7.00e-152	528.00
IUUC-Csv-026352	Ciona savignyi	42.99	3.00e-146	509.00
IUUC-Cgl-026393	Colletotrichum gloeosporioides	42.06	1.00e-118	418.00
IUUC-Cne-027004	Cryptococcus neoformans	55.59	0.00e+00	799.00
IUUC-Cme-027242	Cyanidioschyzon merolae	37.13	1.00e-116	411.00
IUUC-Dre-028658	Danio rerio	45.28	2.00e-159	554.00
IUUC-Dno-028883	Dasypus novemcinctus	45.14	9.00e-157	545.00
IUUC-Dor-031031	Dipodomys ordii	45.21	9.00e-159	551.00
IUUC-Dse-031443	Dothistroma septosporum	47.92	2.00e-168	583.00
IUUC-Dme-031786	Drosophila melanogaster	43.15	2.00e-152	530.00
IUUC-Eca-033677	Equus caballus	47.39	2.00e-161	560.00
IUUC-Eeu-035310	Erinaceus europaeus	43.53	3.00e-123	433.00
IUUC-Fca-035888	Felis catus	45.60	5.00e-159	552.00
IUUC-Fal-037438	Ficedula albicollis	43.29	5.00e-118	416.00
IUUC-Fox-037973	Fusarium oxysporum	46.43	2.00e-166	577.00
IUUC-Fso-038187	Fusarium solani	46.74	5.00e-165	572.00
IUUC-Gmo-039114	Gadus morhua	42.65	1.00e-141	494.00
IUUC-Ggr-039746	Gaeumannomyces graminis	46.58	2.00e-167	580.00
IUUC-Gga-040631	Gallus gallus	45.59	3.00e-87	313.00
IUUC-Gac-042582	Gasterosteus aculeatus	42.63	3.00e-147	513.00
IUUC-Gma-044215	Glycine max	42.65	5.00e-125	439.00
IUUC-Ggo-045587	Gorilla gorilla	46.12	9.00e-164	568.00
IUUC-Hsa-046319	Homo sapiens	46.25	1.00e-163	567.00
IUUC-Hvu-047526	Hordeum vulgare	42.56	7.00e-124	435.00
IUUC-Itr-048683	Ictidomys tridecemlineatus	46.42	2.00e-159	554.00
IUUC-Kpa-049221	Komagataella pastoris	46.58	3.00e-165	573.00
IUUC-Lch-049640	Latimeria chalumnae	46.71	1.00e-169	588.00
IUUC-Lpe-051135	Leersia perrieri	41.00	4.00e-118	416.00
IUUC-Loc-051930	Lepisosteus oculatus	46.06	2.00e-168	583.00
IUUC-Lma-053290	Leptosphaeria maculans	47.52	2.00e-166	577.00
IUUC-Laf-053903	Loxodonta africana	43.31	7.00e-137	478.00
IUUC-Mcc-055471	Macaca mulatta	45.93	2.00e-162	563.00
IUUC-Meu-056190	Macropus eugenii	46.43	1.00e-157	548.00
IUUC-Mor-057135	Magnaporthe oryzae	47.60	1.00e-158	551.00
IUUC-Mpo-057475	Magnaporthe poae	45.73	7.00e-153	531.00
IUUC-Mtr-058689	Medicago truncatula	37.50	1.00e-111	395.00
IUUC-Mla-059149	Melampsora laricipopulina	77.23	0.00e+00	1094.00
IUUC-Mga-059645	Meleagris gallopavo	42.86	9.00e-56	207.00
IUUC-Mvi-060485	Microbotryum violaceum	55.82	0.00e+00	779.00
IUUC-Mmr-061674	Microcebus murinus	44.43	3.00e-156	543.00
IUUC-Mdo-062973	Monodelphis domestica	46.50	1.00e-164	571.00
IUUC-Mmu-064180	Mus musculus	45.44	2.00e-158	550.00
IUUC-Mac-064535	Musa acuminata	40.45	7.00e-84	303.00
IUUC-Mpu-066406	Mustela putorius furo	46.99	2.00e-162	563.00
IUUC-Mlu-067795	Myotis lucifugus	47.07	6.00e-154	535.00
IUUC-Nfi-068516	Neosartorya fischeri	47.27	1.00e-148	518.00
IUUC-Ncr-068767	Neurospora crassa	49.77	3.00e-158	550.00
IUUC-Opr-071084	Ochotona princeps	42.16	1.00e-60	224.00
IUUC-Ont-071614	Oreochromis niloticus	44.13	1.00e-159	554.00
IUUC-Oba-075980	Oryza barthii	41.16	5.00e-117	412.00
IUUC-Obr-076799	Oryza brachyantha	44.30	4.00e-132	462.00
IUUC-Ogl-077134	Oryza glaberrima	43.66	9.00e-126	441.00
IUUC-Ogu-078655	Oryza glumaepatula	41.41	1.00e-118	418.00
IUUC-Oin-079654	Oryza indica	43.66	1.00e-125	441.00
IUUC-Olo-080706	Oryza longistaminata	41.48	1.00e-117	414.00
IUUC-Ome-081716	Oryza meridionalis	45.03	2.00e-73	268.00
IUUC-Oni-082508	Oryza nivara	41.09	5.00e-115	406.00
IUUC-Opu-083707	Oryza punctata	41.00	2.00e-116	411.00
IUUC-Oru-084453	Oryza rufipogon	41.48	1.00e-117	414.00
IUUC-Osa-085811	Oryza sativa	43.50	2.00e-125	441.00
IUUC-Ola-087361	Oryzias latipes	45.50	1.00e-159	554.00
IUUC-Oga-088015	Otolemur garnettii	45.28	3.00e-162	563.00
IUUC-Oar-090058	Ovis aries	52.66	2.00e-50	191.00
IUUC-Ptr-090631	Pan troglodytes	48.59	1.00e-69	254.00
IUUC-Pan-092306	Papio anubis	45.85	3.00e-161	560.00
IUUC-Pma-094622	Petromyzon marinus	46.85	4.00e-173	598.00
IUUC-Pno-094794	Phaeosphaeria nodorum	45.41	9.00e-159	551.00
IUUC-Ppa-095528	Physcomitrella patens	42.53	8.00e-89	318.00
IUUC-Pfo-096682	Poecilia formosa	41.71	7.00e-163	565.00
IUUC-Pab-097939	Pongo abelii	46.18	2.00e-145	507.00
IUUC-Pop-099043	Populus trichocarpa	43.14	1.00e-120	424.00
IUUC-Pca-100333	Procavia capensis	44.25	2.00e-155	540.00
IUUC-Ppe-102078	Prunus persica	39.26	4.00e-116	410.00
IUUC-Pgr-103525	Puccinia graminis	87.10	0.00e+00	1354.00
IUUC-Pte-104029	Pyrenophora teres	48.91	1.00e-176	611.00
IUUC-Pyt-104446	Pyrenophora triticirepentis	48.76	3.00e-176	609.00
IUUC-Rno-105248	Rattus norvegicus	46.09	3.00e-160	556.00
IUUC-Sce-106381	Saccharomyces cerevisiae	49.19	0.00e+00	629.00
IUUC-Sha-106519	Sarcophilus harrisii	46.60	7.00e-164	568.00
IUUC-Sja-107908	Schizosaccharomyces japonicus	44.95	2.00e-154	537.00
IUUC-Spo-108071	Schizosaccharomyces pombe	43.62	1.00e-144	504.00
IUUC-Smo-109604	Selaginella moellendorffii	41.98	3.00e-128	450.00
IUUC-Sit-110551	Setaria italica	42.65	6.00e-125	439.00
IUUC-Sly-110970	Solanum lycopersicum	44.44	7.00e-74	269.00
IUUC-Stu-112593	Solanum tuberosum	41.79	6.00e-131	459.00
IUUC-Sar-113123	Sorex araneus	44.09	4.00e-69	252.00
IUUC-Sbi-113945	Sorghum bicolor	41.84	1.00e-125	441.00
IUUC-Sre-115188	Sporisorium reilianum	47.45	0.00e+00	680.00
IUUC-Ssc-115352	Sus scrofa	46.12	9.00e-158	548.00
IUUC-Tru-117685	Takifugu rubripes	44.89	3.00e-162	563.00
IUUC-Tni-119982	Tetraodon nigroviridis	44.18	5.00e-156	542.00
IUUC-Tca-121664	Theobroma cacao	43.09	2.00e-132	463.00
IUUC-Tre-122229	Trichoderma reesei	47.55	3.00e-145	506.00
IUUC-Tvi-122576	Trichoderma virens	47.14	2.00e-150	523.00
IUUC-Tae-125703	Triticum aestivum	42.46	9.00e-122	428.00
IUUC-Tur-126781	Triticum urartu	38.10	2.00e-107	381.00
IUUC-Tme-127080	Tuber melanosporum	54.40	0.00e+00	675.00
IUUC-Ttr-128514	Tursiops truncatus	43.05	2.00e-101	360.00
IUUC-Uma-129556	Ustilago maydis	48.29	0.00e+00	671.00
IUUC-Vda-129715	Verticillium dahliae	47.83	4.00e-161	559.00
IUUC-Vvi-131211	Vitis vinifera	41.59	2.00e-129	454.00
IUUC-Xma-133883	Xiphophorus maculatus	44.65	6.00e-157	545.00
IUUC-Yli-134438	Yarrowia lipolytica	44.56	1.00e-150	525.00
IUUC-Zma-135341	Zea mays	37.13	8.00e-113	399.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence