iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aca-005178

UUCD1 version

UUC-AnC-00268

Ensembl Protein ID

ENSACAP00000015735.2

UniProt Accession

H9GMV4; H9GMV4_ANOCA

Protein Name

Uncharacterized protein

Gene Name

CSTF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSACAG00000015997.3	ENSACAT00000016051.3	ENSACAP00000015735.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-28	97.9	172	202
UBD/Beta-Prp	2.20e-73	247.0	102	429

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDl 30
           H d+vtclaf ++  +l+sGs+D t+k++D+
   Q: 172  HVDEVTCLAFhPTeQILASGSRDYTLKLFDY 202
           9**********77799**************7 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkl.......................lrslsgheaevtavkfspdgkilvt 69
           ++ ++hk+++++ ++s+d++l+atgs+d++ik+ d++++ +                       +r+l++h +evt++ f+p+++il++
   Q: 102  CYVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAksampievmmnetaqqnmenhpvIRTLYDHVDEVTCLAFHPTEQILAS 190
           67889*********************************988************************************************ PP
   S: 70   gseDrtikvwdlstgkcvhtlk..ghedsvlslsfspsgdklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdgnllvs 154
           gs+D+t+k++d+s+++  +++k  ++ ++++s+sf+psgd++++G+++ t+r++d++t qc+ +  ++++h++++++v+++ ++n++v+
   Q: 191  GSRDYTLKLFDYSKPSAKRAFKyiQEAEMLRSISFHPSGDFILVGTQHPTLRLYDVNTFQCFVScnPQDQHTDAICSVNYNASANMYVT 279
           *****************99999999***************************************99*********************** PP
   S: 155  GslDrtvrlWdlktgkllrtltgghtdsvysls.fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs....pnderlv 238
           Gs+D++++lWd  ++++++t++++h+++  + + f++n+k+++s ++d+  klw+++tg+++++++g     ++v+ +    +++e +v
   Q: 280  GSKDGCIKLWDGVSNRCITTFEKAHDGAEVCSAiFSKNSKYILSSGKDSVAKLWEISTGRTLVKYTGAGLSGRQVHRTqavfNHTEDYV 368
           *********************9999998777666***********************************99999988877789****** PP
   S: 239  sgssDgsiri..Wdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkkn 297
              ++++i++  Wd+r+ +  + l+l ++s++ + v+s++++ ++++s+d ++++w  +++
   Q: 369  LLPDERTISLccWDSRTAERRNLLSLGHNSIVRCIVHSPTNPGFMTCSDDYRARFWYRRST 429
           ********9888********************************************98765 PP

Organism

Anolis carolinensis

Protein Sequence
(Fasta)

MYRPKVSLKD RQQLYKLIIS QLLYDGYINI ANGLINEVKP QSVCAPSEQL LHLIKVGMEN 60
DDSAVQYAIG RSDTVAPGTG IDLEFDADVQ TMSPEASEYE TCYVTSHKGP CRVATYSRDG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGTGTCCTTA GAAGATGGTT TCCATCTGAC TGGATTCCTG CAGTCTCTGA GAAAAGATTT 60
AAAAATGGAT AACGTGAAGA AGGTATAATA AGGACAGTAG TTCGCTCATT CTGGGAGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032028--CSTF1_dimer
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF16699--CSTF1_dimer
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005654--C:nucleoplasm
GO:0003723--F:RNA binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002163	Ailuropoda melanoleuca	97.45	0.00e+00	890.00
IUUC-Atr-002687	Amborella trichopoda	37.88	2.00e-67	249.00
IUUC-Apl-003438	Anas platyrhynchos	99.07	0.00e+00	902.00
IUUC-Aly-005791	Arabidopsis lyrata	37.50	2.00e-80	293.00
IUUC-Ath-006689	Arabidopsis thaliana	37.74	7.00e-81	294.00
IUUC-Ame-011217	Astyanax mexicanus	91.55	9.00e-162	561.00
IUUC-Bta-012619	Bos taurus	97.68	0.00e+00	892.00
IUUC-Bdi-014515	Brachypodium distachyon	43.73	9.00e-80	290.00
IUUC-Bra-017450	Brassica rapa	36.90	2.00e-75	275.00
IUUC-Cel-018151	Caenorhabditis elegans	52.20	2.00e-134	471.00
IUUC-Cja-019304	Callithrix jacchus	97.45	0.00e+00	892.00
IUUC-Cfa-020208	Canis familiaris	97.45	0.00e+00	890.00
IUUC-Cpo-022245	Cavia porcellus	97.45	0.00e+00	890.00
IUUC-Csa-023066	Chlorocebus sabaeus	97.45	0.00e+00	892.00
IUUC-Cho-024770	Choloepus hoffmanni	98.40	0.00e+00	781.00
IUUC-Cin-025621	Ciona intestinalis	57.14	2.00e-151	528.00
IUUC-Csv-026071	Ciona savignyi	60.14	8.00e-162	563.00
IUUC-Dre-028254	Danio rerio	90.72	0.00e+00	835.00
IUUC-Dno-029903	Dasypus novemcinctus	97.45	0.00e+00	890.00
IUUC-Dor-030423	Dipodomys ordii	97.68	0.00e+00	891.00
IUUC-Dme-031993	Drosophila melanogaster	54.82	2.00e-132	465.00
IUUC-Ete-032689	Echinops telfairi	94.63	8.00e-80	290.00
IUUC-Eca-033316	Equus caballus	97.22	0.00e+00	889.00
IUUC-Eeu-035001	Erinaceus europaeus	93.04	0.00e+00	851.00
IUUC-Fca-036447	Felis catus	97.45	0.00e+00	890.00
IUUC-Fal-037601	Ficedula albicollis	99.07	0.00e+00	902.00
IUUC-Gmo-038531	Gadus morhua	88.91	0.00e+00	806.00
IUUC-Gga-040869	Gallus gallus	98.84	0.00e+00	900.00
IUUC-Gac-042380	Gasterosteus aculeatus	90.09	0.00e+00	822.00
IUUC-Gma-043478	Glycine max	38.81	4.00e-84	304.00
IUUC-Ggo-045302	Gorilla gorilla	97.45	0.00e+00	892.00
IUUC-Hsa-045678	Homo sapiens	97.45	0.00e+00	892.00
IUUC-Hvu-047301	Hordeum vulgare	44.21	9.00e-82	296.00
IUUC-Itr-048259	Ictidomys tridecemlineatus	97.45	0.00e+00	890.00
IUUC-Lch-050319	Latimeria chalumnae	94.90	0.00e+00	868.00
IUUC-Lpe-051440	Leersia perrieri	40.13	7.00e-67	247.00
IUUC-Loc-052035	Lepisosteus oculatus	92.34	0.00e+00	845.00
IUUC-Laf-054275	Loxodonta africana	97.45	0.00e+00	890.00
IUUC-Mcc-055857	Macaca mulatta	84.22	0.00e+00	739.00
IUUC-Meu-056194	Macropus eugenii	100.00	1.00e-92	332.00
IUUC-Mtr-058667	Medicago truncatula	38.32	2.00e-76	279.00
IUUC-Mga-059710	Meleagris gallopavo	98.84	0.00e+00	900.00
IUUC-Mmr-060604	Microcebus murinus	97.45	0.00e+00	890.00
IUUC-Mdo-062953	Monodelphis domestica	98.14	0.00e+00	895.00
IUUC-Mmu-064292	Mus musculus	97.22	0.00e+00	889.00
IUUC-Mac-064568	Musa acuminata	43.54	1.00e-78	286.00
IUUC-Mpu-066294	Mustela putorius furo	65.77	2.00e-159	555.00
IUUC-Mlu-067995	Myotis lucifugus	96.52	0.00e+00	881.00
IUUC-Nle-069322	Nomascus leucogenys	97.45	0.00e+00	892.00
IUUC-Opr-070580	Ochotona princeps	97.45	0.00e+00	890.00
IUUC-Ont-072554	Oreochromis niloticus	92.34	0.00e+00	846.00
IUUC-Oan-072856	Ornithorhynchus anatinus	97.68	0.00e+00	892.00
IUUC-Ocu-074150	Oryctolagus cuniculus	85.65	0.00e+00	751.00
IUUC-Oba-075585	Oryza barthii	38.63	2.00e-69	256.00
IUUC-Obr-076069	Oryza brachyantha	38.82	3.00e-75	275.00
IUUC-Ogl-077045	Oryza glaberrima	42.43	1.00e-79	290.00
IUUC-Ogu-078697	Oryza glumaepatula	39.48	4.00e-75	276.00
IUUC-Oin-080119	Oryza indica	42.43	1.00e-79	290.00
IUUC-Olo-081093	Oryza longistaminata	31.86	2.00e-44	174.00
IUUC-Ome-081718	Oryza meridionalis	34.71	2.00e-56	213.00
IUUC-Oni-082072	Oryza nivara	38.63	2.00e-69	256.00
IUUC-Opu-084080	Oryza punctata	35.00	4.00e-57	214.00
IUUC-Oru-085070	Oryza rufipogon	39.03	4.00e-69	256.00
IUUC-Osa-086149	Oryza sativa	42.43	1.00e-79	290.00
IUUC-Ola-086697	Oryzias latipes	91.88	0.00e+00	845.00
IUUC-Oga-088697	Otolemur garnettii	97.45	0.00e+00	890.00
IUUC-Oar-089774	Ovis aries	97.45	0.00e+00	892.00
IUUC-Ptr-090924	Pan troglodytes	97.45	0.00e+00	892.00
IUUC-Pan-092373	Papio anubis	97.45	0.00e+00	892.00
IUUC-Psi-094001	Pelodiscus sinensis	98.84	0.00e+00	900.00
IUUC-Pma-094274	Petromyzon marinus	74.13	0.00e+00	692.00
IUUC-Ppa-095562	Physcomitrella patens	36.64	2.00e-81	295.00
IUUC-Pfo-097235	Poecilia formosa	92.34	0.00e+00	846.00
IUUC-Pab-098608	Pongo abelii	97.45	0.00e+00	892.00
IUUC-Pca-100268	Procavia capensis	97.68	0.00e+00	892.00
IUUC-Ppe-101425	Prunus persica	41.81	2.00e-83	302.00
IUUC-Pva-103183	Pteropus vampyrus	97.45	0.00e+00	890.00
IUUC-Rno-105097	Rattus norvegicus	97.22	0.00e+00	889.00
IUUC-Sha-107642	Sarcophilus harrisii	98.14	0.00e+00	895.00
IUUC-Smo-108680	Selaginella moellendorffii	36.07	5.00e-78	284.00
IUUC-Sit-110471	Setaria italica	41.41	8.00e-83	301.00
IUUC-Sly-111143	Solanum lycopersicum	34.17	3.00e-33	135.00
IUUC-Stu-111926	Solanum tuberosum	44.72	2.00e-33	134.00
IUUC-Sar-112947	Sorex araneus	98.61	4.00e-173	599.00
IUUC-Sbi-113769	Sorghum bicolor	42.73	1.00e-79	290.00
IUUC-Ssc-115736	Sus scrofa	97.45	0.00e+00	890.00
IUUC-Tgu-117457	Taeniopygia guttata	99.07	0.00e+00	902.00
IUUC-Tru-117760	Takifugu rubripes	91.18	0.00e+00	842.00
IUUC-Tsy-118943	Tarsius syrichta	96.52	0.00e+00	876.00
IUUC-Tni-120081	Tetraodon nigroviridis	91.88	0.00e+00	846.00
IUUC-Tca-121190	Theobroma cacao	40.89	4.00e-87	315.00
IUUC-Tae-125535	Triticum aestivum	45.10	1.00e-84	306.00
IUUC-Tur-126329	Triticum urartu	45.10	3.00e-84	306.00
IUUC-Tbe-127878	Tupaia belangeri	95.99	0.00e+00	863.00
IUUC-Ttr-128985	Tursiops truncatus	97.45	0.00e+00	890.00
IUUC-Vpa-130147	Vicugna pacos	97.22	0.00e+00	888.00
IUUC-Vvi-130935	Vitis vinifera	39.77	4.00e-86	311.00
IUUC-Xtr-132482	Xenopus tropicalis	95.36	0.00e+00	869.00
IUUC-Xma-133929	Xiphophorus maculatus	92.34	0.00e+00	846.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence