iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein-protein Interaction
IID
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/RING	88.30	2.00e-114	409.00	IUUC-Hsa-046491

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MPADPGPEVG SGWPGLLMSC LKGPHVILKM EAMKIVHPEK FPELPAATPC FPPAPRPTPT 60
LAPKRAWPSD TEIIVNQACG GDMPTLEGAS HTPPLPRRPR KGSSELGFPR VAPVDEVIVN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGGACTGCTG ACCTCTGCTA CAGGAGGAGG CCCCTCCACG CCCCCTTGCC AGCCTCAGCA 60
GACAGAGACC CTGGGTGAGC CCCACAGCCC AAAACAGCCT CCCATACCCC CTTGTCCCCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Gene Ontology

GO:0005829--C:cytosol
GO:0005654--C:nucleoplasm
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0051865--P:protein autoubiquitination

KEGG

rno:499748

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003578	Anas platyrhynchos	65.89	2.00e-85	308.00
IUUC-Ame-011826	Astyanax mexicanus	53.65	3.00e-66	244.00
IUUC-Bta-012546	Bos taurus	88.72	1.00e-118	418.00
IUUC-Cfa-020443	Canis familiaris	90.57	2.00e-117	415.00
IUUC-Csa-023189	Chlorocebus sabaeus	92.83	1.00e-120	425.00
IUUC-Dre-027549	Danio rerio	55.86	8.00e-67	246.00
IUUC-Dno-029779	Dasypus novemcinctus	86.62	5.00e-130	456.00
IUUC-Dor-030838	Dipodomys ordii	98.04	5.00e-55	207.00
IUUC-Ete-033179	Echinops telfairi	87.98	7.00e-88	315.00
IUUC-Eeu-034856	Erinaceus europaeus	91.46	2.00e-80	290.00
IUUC-Fca-036599	Felis catus	91.70	2.00e-116	411.00
IUUC-Fal-036880	Ficedula albicollis	67.57	3.00e-88	318.00
IUUC-Gmo-038843	Gadus morhua	71.24	1.00e-58	218.00
IUUC-Gga-040602	Gallus gallus	63.81	2.00e-85	308.00
IUUC-Gac-042541	Gasterosteus aculeatus	60.99	1.00e-57	215.00
IUUC-Gma-044330	Glycine max	37.70	7.00e-07	47.40
IUUC-Ggo-045325	Gorilla gorilla	92.83	1.00e-120	425.00
IUUC-Hsa-046491	Homo sapiens	92.83	1.00e-120	425.00
IUUC-Itr-048264	Ictidomys tridecemlineatus	93.63	2.00e-120	424.00
IUUC-Lch-050212	Latimeria chalumnae	61.83	6.00e-83	300.00
IUUC-Loc-052420	Lepisosteus oculatus	56.92	2.00e-65	241.00
IUUC-Laf-053629	Loxodonta africana	90.84	4.00e-111	393.00
IUUC-Mcc-055025	Macaca mulatta	93.21	2.00e-137	481.00
IUUC-Meu-055903	Macropus eugenii	84.15	2.00e-107	381.00
IUUC-Mtr-058453	Medicago truncatula	34.29	5.00e-07	48.10
IUUC-Mga-059611	Meleagris gallopavo	72.89	3.00e-65	240.00
IUUC-Mmr-061478	Microcebus murinus	93.21	5.00e-137	479.00
IUUC-Mdo-062349	Monodelphis domestica	84.15	3.00e-79	286.00
IUUC-Mmu-063251	Mus musculus	100.00	2.00e-124	438.00
IUUC-Mpu-066126	Mustela putorius furo	91.32	4.00e-123	433.00
IUUC-Oga-088531	Otolemur garnettii	93.98	5.00e-125	440.00
IUUC-Pan-091686	Papio anubis	92.83	1.00e-120	425.00
IUUC-Pfo-097328	Poecilia formosa	52.94	3.00e-65	241.00
IUUC-Pab-097541	Pongo abelii	93.21	6.00e-121	426.00
IUUC-Pca-100264	Procavia capensis	91.73	8.00e-126	442.00
IUUC-Pva-102345	Pteropus vampyrus	91.70	3.00e-118	417.00
IUUC-Sha-106509	Sarcophilus harrisii	84.15	2.00e-107	381.00
IUUC-Sit-110791	Setaria italica	35.00	3.00e-06	45.40
IUUC-Sbi-114208	Sorghum bicolor	35.00	3.00e-06	45.40
IUUC-Ssc-115802	Sus scrofa	90.94	3.00e-114	404.00
IUUC-Tru-117537	Takifugu rubripes	54.72	5.00e-64	237.00
IUUC-Tca-121291	Theobroma cacao	38.33	2.00e-06	46.20
IUUC-Ttr-128327	Tursiops truncatus	91.32	9.00e-124	436.00
IUUC-Xtr-132106	Xenopus tropicalis	63.88	6.00e-87	313.00
IUUC-Xma-133724	Xiphophorus maculatus	52.94	3.00e-65	241.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence