iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-090894

Ensembl Protein ID

ENSPTRP00000031586.5

UniProt Accession

H2QTJ6; H2QTJ6_PANTR

Genbank Protein ID

JAA10848.1; JAA14386.1; JAA14387.1; JAA14388.1; JAA14389.1; JAA32897.1; JAA32911.1; JAA41772.1

Protein Name

Cell division cycle 40 homolog

Genbank Nucleotide ID

AACZ03044111; GABF01007759; GABF01007758; GABF01007757; GABF01007756; GABD01000203; GABD01000189; GABE01002967

Gene Name

CDC40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000018495.5	ENSPTRT00000034175.5	ENSPTRP00000031586.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-31	104.8	330	367
UBD/Beta-Prp	2.30e-46	158.3	279	486

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclafsd..tllvsGsdDgtikvWDlrtgvll 36
           gH+  v++++f++  t ++s+++D  +k+WD+ tg ++
   Q: 330  GHSKAVRDICFNTagTQFLSAAYDRYLKLWDTETGQCI 367
           8**********444699******************996 PP

UBD/Beta-Prp

   S: 85   kcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdl.etgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkl 171
           k++h+++gh++ v +++++p sg+ l+s s d  i++w++  ++ cl+ t+ gh+++v+ ++++  g  + s+++Dr ++lWd +tg++
   Q: 279  KQIHVWSGHTKGVSAVRLFPlSGHLLLSCSMDCKIKLWEVyGERRCLR-TFIGHSKAVRDICFNTAGTQFLSAAYDRYLKLWDTETGQC 366
           667777777777777777777777777777777777777633556666.7777777777777777777777777777777777777777 PP
   S: 172  lrtltgghtdsvyslsfdsng...kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdll 257
           + ++t  + +  y+++f+++    + +v+g  d+++  wd+++ge+v+++  h   v+ + f +++ r+vs+s+D+s+r+W  +     
   Q: 367  ISRFT--NRKVPYCVKFNPDEdkqNLFVAGMSDKKIVQWDIRSGEIVQEYDRHLGAVNTIVFVDENRRFVSTSDDKSLRVWEWDIPVDF 453
           77776..4666677777776666677777777777777777777777777777777777777777777777777777777755555556 PP
   S: 258  ktlqlhnssvisvavlsfgdnvlvlgsedskvn 290
           k ++ +  ++++  +ls++++ l+  s d+++ 
   Q: 454  KYIAEPSMHSMPAVTLSPNGKWLACQSMDNQIL 486
           666666666666666666666666666665554 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

MSAAIAALAA SYGSGSGSES DSDSESSRCP LPAADSLMHL TKSPSSKPSL AVAVDSAPEV 60
AVKEDLETGV HLDPAVKEVQ YNPTYETMFA PEFGPENPFR TQQMAAPRNM LSGYAEPAHI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CTCCGCAGAA GATTTGTTGC CGTCATGTCG GCTGCGATTG CAGCTCTGGC CGCTTCCTAT 60
GGTTCGGGTT CAGGGTCCGA ATCGGACTCG GACAGTGAGA GCAGTCGGTG TCCGCTGCCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0131--Cell cycle
KW-0132--Cell division
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0003723--F:RNA binding
GO:0051301--P:cell division
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

ptr:462936

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	50.00	4.00e-144	504.00
IUUC-Aml-002243	Ailuropoda melanoleuca	98.33	0.00e+00	811.00
IUUC-Atr-002502	Amborella trichopoda	51.13	9.00e-154	536.00
IUUC-Apl-003885	Anas platyrhynchos	94.07	0.00e+00	1019.00
IUUC-Aca-004854	Anolis carolinensis	69.84	0.00e+00	750.00
IUUC-Aly-006158	Arabidopsis lyrata	49.38	8.00e-156	543.00
IUUC-Ath-007474	Arabidopsis thaliana	52.25	2.00e-155	542.00
IUUC-Ago-007726	Ashbya gossypii	37.34	8.00e-71	260.00
IUUC-Acl-008220	Aspergillus clavatus	43.57	9.00e-133	467.00
IUUC-Afl-008473	Aspergillus flavus	42.51	7.00e-130	457.00
IUUC-Afu-008773	Aspergillus fumigatus	43.32	9.00e-131	460.00
IUUC-Ani-009323	Aspergillus nidulans	43.21	1.00e-117	416.00
IUUC-Ang-009851	Aspergillus niger	43.36	5.00e-131	461.00
IUUC-Aor-009950	Aspergillus oryzae	42.51	7.00e-130	457.00
IUUC-Ate-010372	Aspergillus terreus	44.61	1.00e-132	466.00
IUUC-Ame-011660	Astyanax mexicanus	85.56	0.00e+00	981.00
IUUC-Bgr-012230	Blumeria graminis	44.25	3.00e-125	442.00
IUUC-Bta-012568	Bos taurus	98.73	0.00e+00	1092.00
IUUC-Bci-013646	Botrytis cinerea	45.14	2.00e-122	432.00
IUUC-Bdi-014199	Brachypodium distachyon	50.48	2.00e-145	508.00
IUUC-Bol-015695	Brassica oleracea	50.18	3.00e-162	565.00
IUUC-Bra-017923	Brassica rapa	50.71	9.00e-163	566.00
IUUC-Cel-018535	Caenorhabditis elegans	51.45	2.00e-178	618.00
IUUC-Cja-019071	Callithrix jacchus	99.28	0.00e+00	1097.00
IUUC-Cfa-020559	Canis familiaris	98.73	0.00e+00	1091.00
IUUC-Cpo-022356	Cavia porcellus	99.09	0.00e+00	1095.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	44.02	2.00e-77	281.00
IUUC-Csa-023125	Chlorocebus sabaeus	99.46	0.00e+00	1098.00
IUUC-Cho-024676	Choloepus hoffmanni	90.12	0.00e+00	949.00
IUUC-Cin-025229	Ciona intestinalis	71.23	0.00e+00	772.00
IUUC-Csv-025868	Ciona savignyi	71.58	4.00e-41	158.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	41.27	5.00e-108	384.00
IUUC-Cne-026885	Cryptococcus neoformans	51.85	6.00e-153	534.00
IUUC-Dre-027631	Danio rerio	85.35	0.00e+00	987.00
IUUC-Dno-029815	Dasypus novemcinctus	87.97	0.00e+00	1003.00
IUUC-Dor-031143	Dipodomys ordii	83.70	0.00e+00	916.00
IUUC-Dse-031520	Dothistroma septosporum	45.81	4.00e-96	345.00
IUUC-Dme-032050	Drosophila melanogaster	62.59	0.00e+00	748.00
IUUC-Ete-032866	Echinops telfairi	95.65	0.00e+00	1056.00
IUUC-Eca-033384	Equus caballus	98.91	0.00e+00	1090.00
IUUC-Eeu-034471	Erinaceus europaeus	84.42	0.00e+00	855.00
IUUC-Fca-035727	Felis catus	98.55	0.00e+00	1091.00
IUUC-Fal-036774	Ficedula albicollis	94.64	0.00e+00	1031.00
IUUC-Fox-037951	Fusarium oxysporum	42.33	4.00e-127	448.00
IUUC-Fso-038287	Fusarium solani	43.33	7.00e-125	440.00
IUUC-Gmo-039670	Gadus morhua	82.27	0.00e+00	951.00
IUUC-Ggr-039764	Gaeumannomyces graminis	40.22	1.00e-116	413.00
IUUC-Gga-040293	Gallus gallus	95.36	0.00e+00	1034.00
IUUC-Gac-042159	Gasterosteus aculeatus	85.61	0.00e+00	989.00
IUUC-Gma-044299	Glycine max	50.38	2.00e-145	509.00
IUUC-Ggo-044864	Gorilla gorilla	100.00	0.00e+00	1103.00
IUUC-Hsa-046602	Homo sapiens	100.00	0.00e+00	1103.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	99.28	0.00e+00	818.00
IUUC-Kpa-049318	Komagataella pastoris	45.85	4.00e-96	345.00
IUUC-Lch-049796	Latimeria chalumnae	76.56	0.00e+00	853.00
IUUC-Lpe-051153	Leersia perrieri	50.09	1.00e-146	513.00
IUUC-Loc-052467	Lepisosteus oculatus	87.55	0.00e+00	996.00
IUUC-Lma-053107	Leptosphaeria maculans	48.16	3.00e-113	402.00
IUUC-Laf-053787	Loxodonta africana	98.01	0.00e+00	1117.00
IUUC-Mcc-055706	Macaca mulatta	99.64	0.00e+00	1100.00
IUUC-Meu-056757	Macropus eugenii	80.68	0.00e+00	636.00
IUUC-Mor-057079	Magnaporthe oryzae	38.86	2.00e-115	409.00
IUUC-Mpo-057533	Magnaporthe poae	50.71	2.00e-112	399.00
IUUC-Mtr-057950	Medicago truncatula	62.39	1.00e-135	476.00
IUUC-Mla-058910	Melampsora laricipopulina	47.05	4.00e-148	518.00
IUUC-Mga-059366	Meleagris gallopavo	94.27	0.00e+00	1031.00
IUUC-Mvi-060349	Microbotryum violaceum	58.94	3.00e-137	482.00
IUUC-Mmr-061209	Microcebus murinus	99.09	0.00e+00	1132.00
IUUC-Mdo-062118	Monodelphis domestica	95.47	0.00e+00	1100.00
IUUC-Mmu-063173	Mus musculus	98.91	0.00e+00	1092.00
IUUC-Mac-065080	Musa acuminata	50.00	1.00e-153	536.00
IUUC-Mpu-066659	Mustela putorius furo	98.55	0.00e+00	1090.00
IUUC-Mlu-067029	Myotis lucifugus	98.19	0.00e+00	1063.00
IUUC-Nfi-068334	Neosartorya fischeri	44.86	4.00e-132	464.00
IUUC-Ncr-068675	Neurospora crassa	38.61	5.00e-103	368.00
IUUC-Nle-070113	Nomascus leucogenys	98.73	0.00e+00	1095.00
IUUC-Opr-070685	Ochotona princeps	90.40	0.00e+00	1038.00
IUUC-Ont-071680	Oreochromis niloticus	85.19	0.00e+00	983.00
IUUC-Oan-073573	Ornithorhynchus anatinus	96.46	0.00e+00	960.00
IUUC-Ocu-074074	Oryctolagus cuniculus	98.55	0.00e+00	1126.00
IUUC-Oba-075625	Oryza barthii	50.18	2.00e-147	515.00
IUUC-Obr-076510	Oryza brachyantha	51.33	2.00e-147	515.00
IUUC-Ogl-077275	Oryza glaberrima	50.18	2.00e-147	515.00
IUUC-Ogu-078563	Oryza glumaepatula	50.00	2.00e-147	515.00
IUUC-Oin-079898	Oryza indica	63.45	2.00e-134	472.00
IUUC-Olo-081080	Oryza longistaminata	52.02	2.00e-141	495.00
IUUC-Oni-083121	Oryza nivara	50.18	2.00e-147	515.00
IUUC-Opu-083329	Oryza punctata	50.09	7.00e-147	513.00
IUUC-Oru-084807	Oryza rufipogon	49.61	6.00e-129	454.00
IUUC-Osa-086039	Oryza sativa	50.27	5.00e-148	517.00
IUUC-Ola-087149	Oryzias latipes	84.10	0.00e+00	972.00
IUUC-Olu-087627	Ostreococcus lucimarinus	43.55	2.00e-121	429.00
IUUC-Oga-088359	Otolemur garnettii	98.91	0.00e+00	1094.00
IUUC-Oar-089390	Ovis aries	98.73	0.00e+00	1088.00
IUUC-Pan-092476	Papio anubis	99.64	0.00e+00	1100.00
IUUC-Psi-093527	Pelodiscus sinensis	93.12	0.00e+00	986.00
IUUC-Pno-094771	Phaeosphaeria nodorum	48.19	7.00e-113	400.00
IUUC-Ppa-095386	Physcomitrella patens	50.47	2.00e-155	542.00
IUUC-Pfo-096139	Poecilia formosa	86.47	0.00e+00	993.00
IUUC-Pab-097838	Pongo abelii	99.39	0.00e+00	975.00
IUUC-Pop-098945	Populus trichocarpa	51.50	6.00e-153	534.00
IUUC-Pca-100876	Procavia capensis	82.79	0.00e+00	932.00
IUUC-Ppe-101777	Prunus persica	50.85	3.00e-151	528.00
IUUC-Pva-102418	Pteropus vampyrus	97.83	0.00e+00	1084.00
IUUC-Pgr-103456	Puccinia graminis	50.37	5.00e-159	554.00
IUUC-Ptt-103731	Puccinia triticina	46.10	2.00e-145	509.00
IUUC-Pte-104386	Pyrenophora teres	49.51	1.00e-114	406.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	50.49	1.00e-114	406.00
IUUC-Rno-105694	Rattus norvegicus	94.38	0.00e+00	1024.00
IUUC-Sce-106339	Saccharomyces cerevisiae	37.63	3.00e-75	275.00
IUUC-Sha-106709	Sarcophilus harrisii	95.65	0.00e+00	1098.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	40.35	3.00e-124	438.00
IUUC-Spo-108331	Schizosaccharomyces pombe	42.15	2.00e-122	432.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	47.31	5.00e-117	414.00
IUUC-Smo-108778	Selaginella moellendorffii	45.30	4.00e-127	447.00
IUUC-Sit-110446	Setaria italica	48.62	3.00e-145	508.00
IUUC-Sly-111330	Solanum lycopersicum	50.56	5.00e-151	527.00
IUUC-Stu-112610	Solanum tuberosum	50.18	3.00e-151	528.00
IUUC-Sar-113065	Sorex araneus	78.33	1.00e-126	446.00
IUUC-Sbi-114005	Sorghum bicolor	49.71	5.00e-143	501.00
IUUC-Sre-114988	Sporisorium reilianum	50.37	1.00e-158	553.00
IUUC-Ssc-115760	Sus scrofa	98.91	0.00e+00	1095.00
IUUC-Tgu-116493	Taeniopygia guttata	95.16	0.00e+00	1037.00
IUUC-Tru-118489	Takifugu rubripes	81.87	0.00e+00	951.00
IUUC-Tsy-119332	Tarsius syrichta	98.73	0.00e+00	1129.00
IUUC-Tni-120202	Tetraodon nigroviridis	78.79	0.00e+00	882.00
IUUC-Tca-121429	Theobroma cacao	49.72	1.00e-150	526.00
IUUC-Tre-122162	Trichoderma reesei	43.01	3.00e-124	438.00
IUUC-Tvi-122500	Trichoderma virens	42.57	2.00e-121	429.00
IUUC-Tae-125557	Triticum aestivum	48.71	6.00e-144	504.00
IUUC-Tur-126554	Triticum urartu	48.61	5.00e-142	497.00
IUUC-Tme-126919	Tuber melanosporum	45.14	1.00e-138	486.00
IUUC-Tbe-127968	Tupaia belangeri	93.12	0.00e+00	1050.00
IUUC-Ttr-129215	Tursiops truncatus	98.19	0.00e+00	1081.00
IUUC-Uma-129622	Ustilago maydis	49.29	6.00e-160	557.00
IUUC-Vda-129750	Verticillium dahliae	44.04	4.00e-124	438.00
IUUC-Vpa-130617	Vicugna pacos	96.32	0.00e+00	980.00
IUUC-Vvi-131238	Vitis vinifera	61.81	2.00e-134	472.00
IUUC-Xtr-131865	Xenopus tropicalis	90.07	0.00e+00	1013.00
IUUC-Xma-133627	Xiphophorus maculatus	86.65	0.00e+00	995.00
IUUC-Yli-134390	Yarrowia lipolytica	45.76	4.00e-116	411.00
IUUC-Zma-135925	Zea mays	51.24	7.00e-141	494.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence