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Tag Content
iUUCD ID IUUC-Atr-003089
Ensembl Protein ID ERN19419
UniProt Accession U5DA85; U5DA85_AMBTC
Genbank Protein ID ERN19419.1
Protein Name Ubiquitin-related modifier 1 homolog
Genbank Nucleotide ID KI392069
Gene Name AMTR_s00069p00167010
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AMTR_s00069p00167010 ERN19419 ERN19419
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
ULD/UDP/UBQ/UBQ_Other 37.62 4.00e-15 73.90 IUUC-Sce-106366
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Amborella trichopoda
Functional Description
(View)

Functional Description


     Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
 Acts as a sulfur carrier required for 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Serves as sulfur donor in tRNA 2-thiolation reaction by being thiocarboxylated (-COSH) at its C-terminus by MOCS3. The sulfur is then transferred to tRNA to form 2-thiolation of mcm(5)S(2)U. Also acts as a ubiquitin-like protein (UBL) that is covalently conjugated via an isopeptide bond to lysine residues of target proteins. The thiocarboxylated form serves as substrate for conjugation and oxidative stress specifically induces the formation of UBL-protein conjugates.
Protein Sequence
(Fasta)
MRLTIEFGGG LELLFQSVKI HQVDVPTKTK GGQLTMKDLL TWVSDNLLKE RPEMFIKGET 60
VRPGILVLIN DCDWELCGQL DATLEEKDAI IFISTLHGG 99
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Protein Fasta Sequence


>IUUC-Atr-003089|ULD,UBQ_Other|Amborella trichopoda
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Nucleotide Sequence
(Fasta)
ATGCGTTTGA CAATTGAATT CGGGTGAGTA GTTCGCTTCG AGCTTCCTTT TACTAGTCTA 60
TGAATTTTTA TTCACCTTCA GGTTCCTCTT ATTACAAATC TCCTTTTTTT GTTTTTTTTT 120
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Nucleotide Fasta Sequence


>IUUC-Atr-003089|ULD,UBQ_Other|Amborella trichopoda
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Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-1017--Isopeptide bond
KW-1185--Reference proteome
KW-0819--tRNA processing
KW-0833--Ubl conjugation pathway
Interpro

IPR012675--Beta-grasp_dom
IPR016155--Mopterin_synth/thiamin_S_b
IPR015221--Urm1
Pfam

PF09138--Urm1
Gene Ontology

GO:0005829--C:cytosol
GO:0032447--P:protein urmylation
GO:0034227--P:tRNA thio-modification
GO:0002098--P:tRNA wobble uridine modification
KEGG atr:18447803
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-002254 Ailuropoda melanoleuca 55.56 2.00e-30 122.00
IUUC-Apl-003382 Anas platyrhynchos 59.14 5.00e-29 117.00
IUUC-Aca-004981 Anolis carolinensis 55.56 3.00e-30 122.00
IUUC-Aly-005517 Arabidopsis lyrata 69.57 5.00e-35 137.00
IUUC-Ath-006718 Arabidopsis thaliana 71.08 3.00e-32 128.00
IUUC-Ago-007917 Ashbya gossypii 40.59 4.00e-19 85.10
IUUC-Acl-008054 Aspergillus clavatus 60.00 3.00e-13 64.70
IUUC-Afl-008704 Aspergillus flavus 46.07 2.00e-18 82.00
IUUC-Aor-009890 Aspergillus oryzae 47.52 9.00e-23 97.40
IUUC-Bta-012448 Bos taurus 56.57 2.00e-30 122.00
IUUC-Bci-013865 Botrytis cinerea 45.54 3.00e-22 95.10
IUUC-Bdi-014980 Brachypodium distachyon 68.97 7.00e-32 127.00
IUUC-Bol-016055 Brassica oleracea 68.67 9.00e-31 123.00
IUUC-Bra-016845 Brassica rapa 68.67 9.00e-31 123.00
IUUC-Cel-018485 Caenorhabditis elegans 37.62 6.00e-13 64.30
IUUC-Cja-019587 Callithrix jacchus 57.58 9.00e-31 123.00
IUUC-Cfa-020653 Canis familiaris 57.58 1.00e-30 122.00
IUUC-Cpo-021622 Cavia porcellus 57.58 9.00e-31 123.00
IUUC-Cre-023015 Chlamydomonas reinhardtii 59.60 3.00e-32 128.00
IUUC-Csa-023756 Chlorocebus sabaeus 56.58 1.00e-21 94.40
IUUC-Cgl-026518 Colletotrichum gloeosporioides 41.58 7.00e-19 84.30
IUUC-Cne-026953 Cryptococcus neoformans 53.40 1.00e-25 107.00
IUUC-Cme-027314 Cyanidioschyzon merolae 46.46 8.00e-20 87.00
IUUC-Dre-027884 Danio rerio 60.82 3.00e-31 124.00
IUUC-Dno-029262 Dasypus novemcinctus 54.43 5.00e-21 92.40
IUUC-Dor-030601 Dipodomys ordii 54.69 7.00e-16 73.90
IUUC-Dme-031893 Drosophila melanogaster 51.52 4.00e-26 108.00
IUUC-Ete-032773 Echinops telfairi 56.70 2.00e-29 118.00
IUUC-Eca-034187 Equus caballus 58.59 7.00e-31 124.00
IUUC-Eeu-034808 Erinaceus europaeus 54.55 4.00e-30 121.00
IUUC-Fca-036107 Felis catus 56.57 3.00e-30 121.00
IUUC-Fal-036607 Ficedula albicollis 58.06 4.00e-28 114.00
IUUC-Fox-037698 Fusarium oxysporum 38.61 6.00e-18 80.90
IUUC-Gmo-039492 Gadus morhua 60.82 3.00e-31 124.00
IUUC-Ggr-039965 Gaeumannomyces graminis 41.41 2.00e-17 80.10
IUUC-Gga-041268 Gallus gallus 58.59 2.00e-31 125.00
IUUC-Gac-042111 Gasterosteus aculeatus 56.57 3.00e-31 124.00
IUUC-Gma-043240 Glycine max 65.06 3.00e-30 121.00
IUUC-Ggo-045176 Gorilla gorilla 55.26 4.00e-15 72.40
IUUC-Hsa-046077 Homo sapiens 55.56 4.00e-24 101.00
IUUC-Itr-048111 Ictidomys tridecemlineatus 58.24 5.00e-22 94.00
IUUC-Kpa-049157 Komagataella pastoris 43.56 2.00e-17 79.00
IUUC-Lch-049889 Latimeria chalumnae 56.57 1.00e-29 119.00
IUUC-Lpe-050783 Leersia perrieri 66.27 4.00e-30 121.00
IUUC-Loc-052400 Lepisosteus oculatus 59.60 2.00e-31 125.00
IUUC-Lma-053259 Leptosphaeria maculans 46.46 7.00e-20 87.40
IUUC-Laf-053596 Loxodonta africana 56.44 2.00e-29 119.00
IUUC-Mcc-054845 Macaca mulatta 57.14 2.00e-27 112.00
IUUC-Meu-055968 Macropus eugenii 58.59 1.00e-30 123.00
IUUC-Mor-057126 Magnaporthe oryzae 39.60 1.00e-16 77.40
IUUC-Mpo-057311 Magnaporthe poae 40.59 5.00e-18 82.00
IUUC-Mtr-058266 Medicago truncatula 68.24 3.00e-30 121.00
IUUC-Mla-058847 Melampsora laricipopulina 36.79 1.00e-08 50.10
IUUC-Mga-059468 Meleagris gallopavo 59.14 3.00e-29 117.00
IUUC-Mvi-060235 Microbotryum violaceum 69.39 6.00e-16 75.50
IUUC-Mdo-061948 Monodelphis domestica 58.59 5.00e-31 124.00
IUUC-Mmu-063946 Mus musculus 59.79 1.00e-30 122.00
IUUC-Mac-064812 Musa acuminata 71.43 5.00e-33 130.00
IUUC-Mpu-066763 Mustela putorius furo 59.60 2.00e-31 125.00
IUUC-Mlu-066970 Myotis lucifugus 57.89 8.00e-22 93.60
IUUC-Ncr-068824 Neurospora crassa 43.43 1.00e-18 83.60
IUUC-Nle-069849 Nomascus leucogenys 55.26 3.00e-21 92.80
IUUC-Opr-070227 Ochotona princeps 57.58 9.00e-31 123.00
IUUC-Ont-072530 Oreochromis niloticus 57.58 6.00e-31 124.00
IUUC-Oan-073191 Ornithorhynchus anatinus 60.44 1.00e-27 112.00
IUUC-Ocu-074460 Oryctolagus cuniculus 57.58 2.00e-30 122.00
IUUC-Oba-075499 Oryza barthii 66.67 3.00e-31 126.00
IUUC-Obr-076896 Oryza brachyantha 66.67 3.00e-31 126.00
IUUC-Ogl-077834 Oryza glaberrima 66.67 2.00e-31 125.00
IUUC-Ogu-078622 Oryza glumaepatula 66.67 2.00e-31 125.00
IUUC-Oin-079358 Oryza indica 66.67 3.00e-31 126.00
IUUC-Olo-081035 Oryza longistaminata 68.48 1.00e-33 134.00
IUUC-Oni-082425 Oryza nivara 66.67 2.00e-31 125.00
IUUC-Opu-083461 Oryza punctata 67.47 7.00e-31 125.00
IUUC-Oru-084875 Oryza rufipogon 70.42 2.00e-25 105.00
IUUC-Oga-089128 Otolemur garnettii 58.59 1.00e-30 123.00
IUUC-Oar-089896 Ovis aries 56.57 2.00e-30 122.00
IUUC-Ptr-091618 Pan troglodytes 55.26 4.00e-15 72.40
IUUC-Pan-092238 Papio anubis 56.58 1.00e-21 94.40
IUUC-Psi-093879 Pelodiscus sinensis 59.60 2.00e-31 125.00
IUUC-Pma-094484 Petromyzon marinus 56.79 5.00e-23 97.80
IUUC-Ppa-095801 Physcomitrella patens 64.65 3.00e-28 114.00
IUUC-Pfo-097192 Poecilia formosa 62.11 1.00e-30 123.00
IUUC-Pab-098203 Pongo abelii 55.56 5.00e-24 101.00
IUUC-Pop-099614 Populus trichocarpa 68.67 2.00e-31 125.00
IUUC-Pca-100507 Procavia capensis 56.58 1.00e-21 92.80
IUUC-Ppe-101174 Prunus persica 70.71 6.00e-40 154.00
IUUC-Pva-102735 Pteropus vampyrus 56.57 7.00e-28 113.00
IUUC-Pgr-103510 Puccinia graminis 36.89 4.00e-11 58.90
IUUC-Ptt-103918 Puccinia triticina 36.89 5.00e-11 58.50
IUUC-Pte-104173 Pyrenophora teres 46.46 1.00e-21 93.60
IUUC-Pyt-104806 Pyrenophora triticirepentis 47.47 7.00e-22 94.40
IUUC-Rno-105820 Rattus norvegicus 61.05 2.00e-30 122.00
IUUC-Sce-106366 Saccharomyces cerevisiae 37.62 8.00e-16 73.90
IUUC-Sja-107727 Schizosaccharomyces japonicus 39.80 6.00e-16 74.70
IUUC-Spo-108074 Schizosaccharomyces pombe 39.22 1.00e-10 56.60
IUUC-Smo-108944 Selaginella moellendorffii 59.34 2.00e-28 115.00
IUUC-Sit-110277 Setaria italica 69.05 7.00e-33 130.00
IUUC-Sly-111505 Solanum lycopersicum 63.86 3.00e-29 118.00
IUUC-Stu-112076 Solanum tuberosum 63.86 4.00e-29 118.00
IUUC-Sbi-114274 Sorghum bicolor 62.11 6.00e-31 124.00
IUUC-Sre-114953 Sporisorium reilianum 46.08 6.00e-22 94.40
IUUC-Ssc-115418 Sus scrofa 58.59 7.00e-31 123.00
IUUC-Tgu-117311 Taeniopygia guttata 58.06 4.00e-28 114.00
IUUC-Tru-118598 Takifugu rubripes 59.34 1.00e-28 115.00
IUUC-Tni-120109 Tetraodon nigroviridis 57.14 2.00e-28 115.00
IUUC-Tca-120942 Theobroma cacao 66.27 6.00e-31 124.00
IUUC-Tre-122099 Trichoderma reesei 44.09 8.00e-15 70.10
IUUC-Tvi-122285 Trichoderma virens 44.55 2.00e-17 79.70
IUUC-Tae-125193 Triticum aestivum 66.67 8.00e-31 123.00
IUUC-Tur-126677 Triticum urartu 58.33 2.00e-28 115.00
IUUC-Tme-127120 Tuber melanosporum 43.56 3.00e-20 89.00
IUUC-Tbe-128050 Tupaia belangeri 42.42 4.00e-17 78.20
IUUC-Ttr-129019 Tursiops truncatus 57.58 1.00e-30 122.00
IUUC-Uma-129483 Ustilago maydis 47.06 8.00e-22 94.00
IUUC-Vda-129690 Verticillium dahliae 34.82 2.00e-13 65.90
IUUC-Vvi-131174 Vitis vinifera 72.29 9.00e-33 130.00
IUUC-Xma-133862 Xiphophorus maculatus 62.11 1.00e-30 123.00
IUUC-Yli-134398 Yarrowia lipolytica 46.46 1.00e-20 89.70
IUUC-Zma-134964 Zea mays 68.24 2.00e-31 125.00
Created Date 25-Jun-2017

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