iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027345

Ensembl Protein ID

CMR460CT

UniProt Accession

M1VLM9; M1VLM9_CYAM1

Genbank Protein ID

BAM82628.1

Protein Name

Similar to transparent testa glabra 1

Genbank Nucleotide ID

AP006500

Gene Name

CYME_CMR460C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMR460C	CMR460CT	CMR460CT

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.50e-18	64.3	260	294

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sd.tllvsGsdDgtikvWDlrtg 33
           H + v++++f  ++ +++v+++ Dg+++++Dlr+ 
   Q: 260  HDNAVYDVSFdqNTaHHFVTCGADGSVRLFDLRSL 294
           9999*******8889****************9975 PP

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

MRTSSPEHHD NAACRSVCGT ENLDARHRPA QLHGMQCTRQ VRILRANGDT TAPVAFVRIR 60
SRCRRIQHPW VLPLFLMSGD LVQELKRAGG ERFPEVTFEW DSQWPLYAVG WCASSSAQGV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCGCACAT CTTCACCTGA ACACCATGAT AATGCCGCTT GCCGCAGCGT TTGTGGCACC 60
GAAAACCTCG ATGCTCGGCA CAGACCTGCA CAACTGCATG GCATGCAGTG CACGCGTCAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

KEGG

cme:CYME_CMR460C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002310	Ailuropoda melanoleuca	37.41	3.00e-52	196.00
IUUC-Atr-003082	Amborella trichopoda	36.42	2.00e-53	200.00
IUUC-Apl-003746	Anas platyrhynchos	37.41	3.00e-52	196.00
IUUC-Aca-005293	Anolis carolinensis	35.92	5.00e-58	215.00
IUUC-Aly-006211	Arabidopsis lyrata	37.27	5.00e-55	205.00
IUUC-Ath-006884	Arabidopsis thaliana	37.35	3.00e-55	206.00
IUUC-Ago-007732	Ashbya gossypii	28.86	3.00e-36	143.00
IUUC-Acl-008299	Aspergillus clavatus	31.08	4.00e-40	157.00
IUUC-Afl-008470	Aspergillus flavus	31.83	2.00e-39	154.00
IUUC-Afu-008896	Aspergillus fumigatus	30.02	2.00e-39	154.00
IUUC-Ani-009375	Aspergillus nidulans	32.45	6.00e-40	156.00
IUUC-Ang-009687	Aspergillus niger	34.43	7.00e-42	162.00
IUUC-Aor-010198	Aspergillus oryzae	31.41	8.00e-39	152.00
IUUC-Ate-010363	Aspergillus terreus	30.53	6.00e-33	133.00
IUUC-Ame-010643	Astyanax mexicanus	34.26	7.00e-51	191.00
IUUC-Bgr-012055	Blumeria graminis	30.77	1.00e-41	162.00
IUUC-Bta-013199	Bos taurus	36.21	5.00e-58	215.00
IUUC-Bci-013840	Botrytis cinerea	32.80	1.00e-44	172.00
IUUC-Bdi-014944	Brachypodium distachyon	37.10	2.00e-46	177.00
IUUC-Bol-015620	Brassica oleracea	35.65	4.00e-50	189.00
IUUC-Bra-017045	Brassica rapa	35.65	2.00e-50	189.00
IUUC-Cel-018487	Caenorhabditis elegans	33.52	7.00e-59	219.00
IUUC-Cja-018736	Callithrix jacchus	36.21	5.00e-58	215.00
IUUC-Cfa-020446	Canis familiaris	36.21	5.00e-58	215.00
IUUC-Cpo-022424	Cavia porcellus	36.21	5.00e-58	215.00
IUUC-Cre-022609	Chlamydomonas reinhardtii	34.74	2.00e-46	177.00
IUUC-Csa-024013	Chlorocebus sabaeus	35.65	7.00e-52	197.00
IUUC-Cho-024507	Choloepus hoffmanni	37.67	4.00e-54	202.00
IUUC-Cin-025620	Ciona intestinalis	34.39	4.00e-57	212.00
IUUC-Csv-026111	Ciona savignyi	34.68	2.00e-57	213.00
IUUC-Cgl-026588	Colletotrichum gloeosporioides	32.88	4.00e-45	173.00
IUUC-Cne-026871	Cryptococcus neoformans	30.03	6.00e-35	139.00
IUUC-Dre-027940	Danio rerio	35.34	6.00e-58	215.00
IUUC-Dno-029520	Dasypus novemcinctus	36.21	5.00e-58	215.00
IUUC-Dor-030262	Dipodomys ordii	30.93	4.00e-11	59.70
IUUC-Dse-031207	Dothistroma septosporum	30.13	6.00e-34	136.00
IUUC-Dme-031639	Drosophila melanogaster	34.74	2.00e-55	207.00
IUUC-Ete-032605	Echinops telfairi	31.40	4.00e-46	176.00
IUUC-Eca-033668	Equus caballus	32.96	8.00e-47	178.00
IUUC-Fca-035942	Felis catus	36.21	5.00e-58	215.00
IUUC-Fal-037544	Ficedula albicollis	36.21	5.00e-58	215.00
IUUC-Fox-037852	Fusarium oxysporum	33.87	1.00e-46	178.00
IUUC-Fso-038173	Fusarium solani	34.95	4.00e-45	173.00
IUUC-Gmo-038850	Gadus morhua	35.63	4.00e-58	215.00
IUUC-Ggr-040072	Gaeumannomyces graminis	35.14	6.00e-45	172.00
IUUC-Gga-040439	Gallus gallus	36.21	5.00e-58	215.00
IUUC-Gac-041938	Gasterosteus aculeatus	36.52	4.00e-60	222.00
IUUC-Gma-043012	Glycine max	36.78	1.00e-54	204.00
IUUC-Ggo-044490	Gorilla gorilla	36.21	5.00e-58	215.00
IUUC-Hsa-046015	Homo sapiens	36.21	5.00e-58	215.00
IUUC-Hvu-047639	Hordeum vulgare	38.97	4.00e-43	166.00
IUUC-Itr-048428	Ictidomys tridecemlineatus	36.21	5.00e-58	215.00
IUUC-Kpa-049347	Komagataella pastoris	31.56	3.00e-39	153.00
IUUC-Lch-049754	Latimeria chalumnae	35.92	4.00e-58	216.00
IUUC-Lpe-051336	Leersia perrieri	37.66	2.00e-48	184.00
IUUC-Loc-052351	Lepisosteus oculatus	35.16	9.00e-57	211.00
IUUC-Lma-053005	Leptosphaeria maculans	31.38	1.00e-38	152.00
IUUC-Laf-054077	Loxodonta africana	36.21	5.00e-58	215.00
IUUC-Mcc-055728	Macaca mulatta	36.21	5.00e-58	215.00
IUUC-Meu-056685	Macropus eugenii	31.79	2.00e-42	163.00
IUUC-Mor-057075	Magnaporthe oryzae	34.02	1.00e-42	164.00
IUUC-Mpo-057336	Magnaporthe poae	34.23	5.00e-43	166.00
IUUC-Mtr-058793	Medicago truncatula	38.20	5.00e-59	218.00
IUUC-Mla-058866	Melampsora laricipopulina	30.13	2.00e-31	127.00
IUUC-Mga-059566	Meleagris gallopavo	37.41	3.00e-52	196.00
IUUC-Mvi-060379	Microbotryum violaceum	34.13	2.00e-26	111.00
IUUC-Mmr-060831	Microcebus murinus	36.21	5.00e-58	215.00
IUUC-Mdo-062612	Monodelphis domestica	36.21	5.00e-58	215.00
IUUC-Mmu-063399	Mus musculus	36.21	5.00e-58	215.00
IUUC-Mac-065344	Musa acuminata	36.74	2.00e-38	150.00
IUUC-Mpu-065951	Mustela putorius furo	36.21	5.00e-58	215.00
IUUC-Mlu-067858	Myotis lucifugus	36.96	6.00e-58	215.00
IUUC-Nfi-068302	Neosartorya fischeri	31.62	2.00e-40	158.00
IUUC-Ncr-068642	Neurospora crassa	34.12	1.00e-42	165.00
IUUC-Nle-070059	Nomascus leucogenys	36.21	5.00e-58	215.00
IUUC-Opr-070572	Ochotona princeps	36.42	2.00e-59	219.00
IUUC-Ont-071420	Oreochromis niloticus	34.78	1.00e-56	210.00
IUUC-Ocu-074105	Oryctolagus cuniculus	36.21	5.00e-58	215.00
IUUC-Oba-075455	Oryza barthii	41.26	5.00e-43	165.00
IUUC-Obr-076064	Oryza brachyantha	35.37	4.00e-43	166.00
IUUC-Ogl-077224	Oryza glaberrima	41.26	5.00e-43	165.00
IUUC-Ogu-078639	Oryza glumaepatula	41.26	6.00e-43	165.00
IUUC-Oin-080194	Oryza indica	41.26	6.00e-43	165.00
IUUC-Olo-080234	Oryza longistaminata	41.26	6.00e-43	165.00
IUUC-Ome-081174	Oryza meridionalis	28.75	1.00e-37	148.00
IUUC-Oni-082021	Oryza nivara	41.26	6.00e-43	165.00
IUUC-Opu-083903	Oryza punctata	35.97	2.00e-44	170.00
IUUC-Oru-084738	Oryza rufipogon	41.26	5.00e-43	165.00
IUUC-Osa-085445	Oryza sativa	41.26	5.00e-43	165.00
IUUC-Ola-086324	Oryzias latipes	35.34	5.00e-58	215.00
IUUC-Olu-087620	Ostreococcus lucimarinus	35.24	9.00e-54	201.00
IUUC-Oga-088446	Otolemur garnettii	36.21	5.00e-58	215.00
IUUC-Oar-090168	Ovis aries	36.21	5.00e-58	215.00
IUUC-Ptr-090691	Pan troglodytes	36.31	3.00e-58	216.00
IUUC-Pan-092772	Papio anubis	36.21	5.00e-58	215.00
IUUC-Psi-093304	Pelodiscus sinensis	38.76	4.00e-50	188.00
IUUC-Pma-094292	Petromyzon marinus	36.43	3.00e-51	192.00
IUUC-Pno-094967	Phaeosphaeria nodorum	31.67	8.00e-40	156.00
IUUC-Ppa-095662	Physcomitrella patens	34.20	1.00e-55	207.00
IUUC-Pfo-097157	Poecilia formosa	35.34	5.00e-58	215.00
IUUC-Pab-097898	Pongo abelii	35.65	6.00e-52	196.00
IUUC-Pop-099260	Populus trichocarpa	38.79	7.00e-59	218.00
IUUC-Pca-100404	Procavia capensis	36.42	2.00e-59	219.00
IUUC-Ppe-101664	Prunus persica	37.85	2.00e-56	210.00
IUUC-Pva-102938	Pteropus vampyrus	36.12	4.00e-38	149.00
IUUC-Pgr-103490	Puccinia graminis	34.70	3.00e-31	126.00
IUUC-Ptt-103946	Puccinia triticina	33.33	1.00e-31	128.00
IUUC-Pte-104094	Pyrenophora teres	31.96	6.00e-40	156.00
IUUC-Pyt-104726	Pyrenophora triticirepentis	31.96	6.00e-40	156.00
IUUC-Rno-104961	Rattus norvegicus	36.21	5.00e-58	215.00
IUUC-Sce-106252	Saccharomyces cerevisiae	30.09	2.00e-37	147.00
IUUC-Sha-107196	Sarcophilus harrisii	33.94	9.00e-48	181.00
IUUC-Sja-107768	Schizosaccharomyces japonicus	34.84	2.00e-41	160.00
IUUC-Spo-108014	Schizosaccharomyces pombe	36.48	7.00e-49	185.00
IUUC-Ssl-108466	Sclerotinia sclerotiorum	34.12	3.00e-44	170.00
IUUC-Smo-109596	Selaginella moellendorffii	34.73	2.00e-51	193.00
IUUC-Sit-110625	Setaria italica	32.69	5.00e-33	132.00
IUUC-Sly-111838	Solanum lycopersicum	39.71	5.00e-61	225.00
IUUC-Stu-112145	Solanum tuberosum	39.71	6.00e-61	225.00
IUUC-Sar-113705	Sorex araneus	31.50	4.00e-43	166.00
IUUC-Sbi-113984	Sorghum bicolor	38.23	6.00e-43	165.00
IUUC-Sre-114968	Sporisorium reilianum	38.01	1.00e-27	115.00
IUUC-Ssc-116028	Sus scrofa	36.21	5.00e-58	215.00
IUUC-Tgu-117189	Taeniopygia guttata	36.21	5.00e-58	215.00
IUUC-Tru-117581	Takifugu rubripes	35.07	7.00e-58	215.00
IUUC-Tsy-119425	Tarsius syrichta	30.82	6.00e-34	135.00
IUUC-Tni-120649	Tetraodon nigroviridis	34.78	5.00e-56	208.00
IUUC-Tca-121493	Theobroma cacao	36.31	9.00e-54	201.00
IUUC-Tre-121987	Trichoderma reesei	34.85	2.00e-46	177.00
IUUC-Tvi-122586	Trichoderma virens	32.97	2.00e-46	177.00
IUUC-Tae-125936	Triticum aestivum	39.78	1.00e-43	167.00
IUUC-Tur-126531	Triticum urartu	29.02	3.00e-38	150.00
IUUC-Tme-126973	Tuber melanosporum	32.38	6.00e-38	150.00
IUUC-Tbe-127919	Tupaia belangeri	36.42	2.00e-59	219.00
IUUC-Ttr-129135	Tursiops truncatus	42.39	2.00e-40	156.00
IUUC-Uma-129362	Ustilago maydis	38.01	1.00e-27	115.00
IUUC-Vda-130025	Verticillium dahliae	34.85	4.00e-43	166.00
IUUC-Vpa-130486	Vicugna pacos	22.68	3.00e-13	66.20
IUUC-Vvi-131483	Vitis vinifera	37.61	8.00e-56	208.00
IUUC-Xtr-132175	Xenopus tropicalis	36.21	3.00e-58	216.00
IUUC-Xma-134129	Xiphophorus maculatus	35.34	5.00e-58	215.00
IUUC-Yli-134419	Yarrowia lipolytica	34.52	1.00e-48	184.00
IUUC-Zma-135276	Zea mays	37.34	1.00e-44	171.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence