iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-013514

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

THO complex subunit 3

Genbank Nucleotide ID

DAAA02027701

Gene Name

THOC3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000035174.3	ENSBTAT00000049661.3	ENSBTAP00000046521.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-26	91.3	97	135

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvll 36
           gH dsv  l++  s+ +l+v++s+D+ti++WD+rt +++
   Q: 97   GHGDSVDQLCWhpSNpDLFVTASGDKTIRIWDVRTTKCI 135
           8***********8778*******************9997 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MAIPQASMGP SSLGQSGPGS MAPWCSVSSG PTRYVLGMQE LFRGHSKTRE FPAHSAKVHS 60
VAWSCDGRRL ASGSFDKTAS VFLLEKDRLV KENNYRGHGD SVDQLCWHPS NPDLFVTASG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGATTC CCCAGGCGTC CATGGGACCC TCATCGCTGG GCCAGAGCGG TCCCGGCTCG 60
ATGGCTCCCT GGTGCTCAGT GTCAAGCGGC CCGACGCGCT ACGTGCTCGG GATGCAGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000784--C:nuclear chromosome, telomeric region
GO:0000445--C:THO complex part of transcription export complex
GO:0046784--P:viral mRNA export from host cell nucleus

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	40.98	1.00e-70	259.00
IUUC-Aml-001264	Ailuropoda melanoleuca	87.17	0.00e+00	626.00
IUUC-Atr-003050	Amborella trichopoda	44.70	2.00e-76	278.00
IUUC-Apl-003426	Anas platyrhynchos	78.57	1.00e-119	422.00
IUUC-Aca-004931	Anolis carolinensis	75.23	2.00e-98	351.00
IUUC-Aly-006237	Arabidopsis lyrata	42.72	2.00e-76	278.00
IUUC-Ath-007581	Arabidopsis thaliana	43.05	7.00e-77	280.00
IUUC-Acl-008253	Aspergillus clavatus	26.90	3.00e-33	135.00
IUUC-Afl-008519	Aspergillus flavus	27.78	3.00e-33	135.00
IUUC-Afu-008886	Aspergillus fumigatus	26.86	5.00e-31	128.00
IUUC-Ani-009275	Aspergillus nidulans	29.12	9.00e-35	140.00
IUUC-Ang-009862	Aspergillus niger	26.13	3.00e-31	129.00
IUUC-Ate-010247	Aspergillus terreus	26.97	3.00e-32	132.00
IUUC-Ame-010828	Astyanax mexicanus	80.50	3.00e-155	541.00
IUUC-Bgr-012163	Blumeria graminis	26.45	2.00e-27	116.00
IUUC-Bci-013639	Botrytis cinerea	27.68	4.00e-36	145.00
IUUC-Bdi-015049	Brachypodium distachyon	41.10	9.00e-69	253.00
IUUC-Bol-015401	Brassica oleracea	44.01	7.00e-75	273.00
IUUC-Bra-017867	Brassica rapa	43.69	2.00e-74	272.00
IUUC-Cel-018699	Caenorhabditis elegans	33.33	1.00e-41	163.00
IUUC-Cja-019591	Callithrix jacchus	85.47	0.00e+00	629.00
IUUC-Cfa-020692	Canis familiaris	86.61	0.00e+00	639.00
IUUC-Cpo-022135	Cavia porcellus	72.73	2.00e-151	528.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	34.15	2.00e-40	159.00
IUUC-Csa-023408	Chlorocebus sabaeus	86.32	0.00e+00	634.00
IUUC-Cho-024349	Choloepus hoffmanni	75.12	7.00e-93	332.00
IUUC-Cin-025418	Ciona intestinalis	71.01	2.00e-54	204.00
IUUC-Csv-026130	Ciona savignyi	57.10	3.00e-110	391.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	28.72	7.00e-37	147.00
IUUC-Cne-026775	Cryptococcus neoformans	31.19	2.00e-14	73.90
IUUC-Dre-028634	Danio rerio	78.75	1.00e-154	538.00
IUUC-Dno-029449	Dasypus novemcinctus	85.47	0.00e+00	632.00
IUUC-Dor-030301	Dipodomys ordii	62.77	2.00e-95	342.00
IUUC-Dse-031341	Dothistroma septosporum	26.19	7.00e-25	107.00
IUUC-Dme-031674	Drosophila melanogaster	55.16	3.00e-104	371.00
IUUC-Ete-033136	Echinops telfairi	83.68	2.00e-171	594.00
IUUC-Eca-034432	Equus caballus	78.63	2.00e-166	578.00
IUUC-Fca-035694	Felis catus	86.61	0.00e+00	639.00
IUUC-Fal-037328	Ficedula albicollis	83.33	2.00e-160	558.00
IUUC-Fox-037894	Fusarium oxysporum	29.96	3.00e-37	148.00
IUUC-Fso-038266	Fusarium solani	26.86	5.00e-33	134.00
IUUC-Gmo-039617	Gadus morhua	78.12	2.00e-154	537.00
IUUC-Ggr-039819	Gaeumannomyces graminis	26.35	7.00e-31	127.00
IUUC-Gga-041164	Gallus gallus	82.54	2.00e-157	548.00
IUUC-Gac-042407	Gasterosteus aculeatus	79.06	8.00e-156	542.00
IUUC-Gma-043663	Glycine max	42.76	1.00e-75	276.00
IUUC-Ggo-044989	Gorilla gorilla	85.75	0.00e+00	632.00
IUUC-Hsa-046784	Homo sapiens	86.32	0.00e+00	635.00
IUUC-Hvu-047633	Hordeum vulgare	38.60	6.00e-45	173.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	64.87	2.00e-126	445.00
IUUC-Lch-049894	Latimeria chalumnae	83.33	3.00e-160	557.00
IUUC-Lpe-051061	Leersia perrieri	35.29	4.00e-49	187.00
IUUC-Loc-052424	Lepisosteus oculatus	80.94	4.00e-158	550.00
IUUC-Lma-053127	Leptosphaeria maculans	31.83	5.00e-41	162.00
IUUC-Laf-053396	Loxodonta africana	86.40	1.00e-173	601.00
IUUC-Mcc-055517	Macaca mulatta	86.32	0.00e+00	635.00
IUUC-Meu-056034	Macropus eugenii	85.36	2.00e-165	574.00
IUUC-Mor-057011	Magnaporthe oryzae	22.55	2.00e-18	86.70
IUUC-Mpo-057490	Magnaporthe poae	26.35	4.00e-31	128.00
IUUC-Mtr-057927	Medicago truncatula	42.54	7.00e-76	276.00
IUUC-Mla-058945	Melampsora laricipopulina	32.54	6.00e-40	157.00
IUUC-Mga-060155	Meleagris gallopavo	78.49	9.00e-116	409.00
IUUC-Mvi-060344	Microbotryum violaceum	31.92	6.00e-45	174.00
IUUC-Mmr-060834	Microcebus murinus	85.75	0.00e+00	633.00
IUUC-Mdo-062587	Monodelphis domestica	85.58	1.00e-164	572.00
IUUC-Mmu-063395	Mus musculus	86.32	0.00e+00	635.00
IUUC-Mac-064579	Musa acuminata	43.05	1.00e-75	276.00
IUUC-Mpu-066688	Mustela putorius furo	82.30	1.00e-149	522.00
IUUC-Mlu-067299	Myotis lucifugus	86.32	0.00e+00	633.00
IUUC-Nfi-068562	Neosartorya fischeri	26.61	3.00e-32	132.00
IUUC-Ncr-068654	Neurospora crassa	28.62	1.00e-31	130.00
IUUC-Nle-069736	Nomascus leucogenys	85.19	2.00e-180	624.00
IUUC-Ont-071763	Oreochromis niloticus	79.38	5.00e-156	543.00
IUUC-Ocu-074909	Oryctolagus cuniculus	86.04	9.00e-176	608.00
IUUC-Oba-075902	Oryza barthii	35.62	1.00e-49	190.00
IUUC-Obr-076613	Oryza brachyantha	42.16	2.00e-68	252.00
IUUC-Ogl-077009	Oryza glaberrima	41.83	2.00e-67	249.00
IUUC-Ogu-078344	Oryza glumaepatula	35.62	1.00e-49	190.00
IUUC-Oin-079773	Oryza indica	41.83	2.00e-67	249.00
IUUC-Olo-080474	Oryza longistaminata	35.20	2.00e-31	128.00
IUUC-Ome-081837	Oryza meridionalis	40.58	1.00e-22	99.00
IUUC-Oni-082263	Oryza nivara	35.62	1.00e-49	190.00
IUUC-Opu-083813	Oryza punctata	41.83	3.00e-67	248.00
IUUC-Oru-084610	Oryza rufipogon	35.62	9.00e-50	190.00
IUUC-Osa-085415	Oryza sativa	41.83	2.00e-67	249.00
IUUC-Ola-086659	Oryzias latipes	80.00	1.00e-156	545.00
IUUC-Olu-087649	Ostreococcus lucimarinus	33.67	3.00e-46	178.00
IUUC-Oga-087923	Otolemur garnettii	86.32	0.00e+00	637.00
IUUC-Oar-089688	Ovis aries	84.90	4.00e-180	623.00
IUUC-Ptr-091628	Pan troglodytes	86.32	0.00e+00	635.00
IUUC-Pan-092586	Papio anubis	85.59	0.00e+00	629.00
IUUC-Psi-093701	Pelodiscus sinensis	75.00	1.00e-89	322.00
IUUC-Pma-094465	Petromyzon marinus	75.56	5.00e-148	516.00
IUUC-Pno-094767	Phaeosphaeria nodorum	31.48	5.00e-40	159.00
IUUC-Ppa-095195	Physcomitrella patens	45.23	6.00e-82	297.00
IUUC-Pfo-097383	Poecilia formosa	76.35	4.00e-155	540.00
IUUC-Pab-098669	Pongo abelii	86.04	0.00e+00	632.00
IUUC-Pop-099409	Populus trichocarpa	44.04	7.00e-77	280.00
IUUC-Pca-100769	Procavia capensis	81.77	2.00e-168	585.00
IUUC-Ppe-101321	Prunus persica	45.10	1.00e-78	286.00
IUUC-Pva-102759	Pteropus vampyrus	86.04	0.00e+00	634.00
IUUC-Pgr-103535	Puccinia graminis	33.66	4.00e-44	171.00
IUUC-Ptt-103820	Puccinia triticina	33.66	3.00e-44	172.00
IUUC-Pte-104271	Pyrenophora teres	31.16	2.00e-38	152.00
IUUC-Pyt-104500	Pyrenophora triticirepentis	30.61	6.00e-32	132.00
IUUC-Rno-106126	Rattus norvegicus	86.04	0.00e+00	634.00
IUUC-Sce-106455	Saccharomyces cerevisiae	27.46	1.00e-08	54.30
IUUC-Sha-107146	Sarcophilus harrisii	82.04	3.00e-161	560.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	31.43	1.00e-43	170.00
IUUC-Spo-108324	Schizosaccharomyces pombe	37.69	8.00e-52	197.00
IUUC-Smo-108990	Selaginella moellendorffii	44.19	1.00e-76	279.00
IUUC-Sit-110773	Setaria italica	42.24	1.00e-68	253.00
IUUC-Sly-111619	Solanum lycopersicum	44.37	2.00e-77	282.00
IUUC-Stu-112241	Solanum tuberosum	44.70	6.00e-78	283.00
IUUC-Sbi-114842	Sorghum bicolor	43.56	1.00e-69	256.00
IUUC-Sre-115070	Sporisorium reilianum	29.43	4.00e-41	161.00
IUUC-Ssc-115581	Sus scrofa	86.89	0.00e+00	640.00
IUUC-Tgu-117354	Taeniopygia guttata	81.99	4.00e-153	533.00
IUUC-Tru-117745	Takifugu rubripes	77.81	2.00e-153	534.00
IUUC-Tni-120050	Tetraodon nigroviridis	76.88	3.00e-151	527.00
IUUC-Tca-121279	Theobroma cacao	45.03	3.00e-76	278.00
IUUC-Tre-121952	Trichoderma reesei	28.92	3.00e-38	152.00
IUUC-Tvi-122581	Trichoderma virens	29.27	5.00e-39	154.00
IUUC-Tae-124204	Triticum aestivum	43.16	1.00e-70	259.00
IUUC-Tur-126279	Triticum urartu	41.28	3.00e-69	255.00
IUUC-Tme-127000	Tuber melanosporum	28.85	2.00e-32	132.00
IUUC-Ttr-128405	Tursiops truncatus	83.97	1.00e-131	462.00
IUUC-Uma-129547	Ustilago maydis	30.79	9.00e-41	160.00
IUUC-Vda-129689	Verticillium dahliae	28.62	8.00e-30	124.00
IUUC-Vvi-131345	Vitis vinifera	45.03	6.00e-79	287.00
IUUC-Xtr-132136	Xenopus tropicalis	76.25	2.00e-146	511.00
IUUC-Xma-133767	Xiphophorus maculatus	78.44	9.00e-155	539.00
IUUC-Yli-134522	Yarrowia lipolytica	25.07	5.00e-20	92.00
IUUC-Zma-135816	Zea mays	43.23	6.00e-69	254.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence