iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111619

Ensembl Protein ID

Solyc07g066060.2.1

UniProt Accession

K4CHT2; K4CHT2_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc07g066060.2	Solyc07g066060.2.1	Solyc07g066060.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-30	105.2	63	102
UBD/Beta-Prp	1.70e-44	153.0	113	295

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sd.tllvsGsdDgtikvWDlrtgvllk 37
           gHtdsv  l++      l++++s+D+t+++WD r+g++ +
   Q: 63   GHTDSVDQLCWdpKHaELIATASGDKTVRLWDARSGKCSQ 102
           8**********9533799*******************987 PP

UBD/Beta-Prp

   S: 58   vkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpd 148
           ++++pdg  ++ g +D+ + + d++++k++h+ k  +++v  ++++  gd +  ++   t++v   ++ q ++ tl+ h++   c++++p 
   Q: 113  ITYKPDGTHIAVGNRDDELTILDVRKFKPIHKRK-FNYEVNEIAWNTGGDMFFLTTGNGTVEVLAYPSLQAVN-TLNAHTAGCYCIAIDPL 201
           789*******************************.************99**************999*******.***************** PP
   S: 149  gnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvs 239
           g++++ Gs+D+ v lW++k + +lrt+t+  + +v+ +sf+++g +++s+s+d  + + ++q+g+ v++    ++ ++sv+  p++++l+ 
   Q: 202  GRYFAVGSADSLVSLWSIKEMLCLRTFTK-LEWPVRTISFNHTGDYIASASEDLFIDIANVQSGRSVHQIP-CRAAMNSVEWNPKHNLLAF 290
           ****************************9.**********************************9666555.57899************** PP
   S: 240  gssDg 244
           +++D+
   Q: 291  AGDDK 295
           **997 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MAETIPFKNL HSREYQGHKK KVHSVAWNCS GTKLASGSVD QTARIWQIEP HGHGKVKDVE 60
LKGHTDSVDQ LCWDPKHAEL IATASGDKTV RLWDARSGKC SQQVELSGEN INITYKPDGT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACAAGCAAA AAAAATATTC AGAGAAGTAA ACGGAGCAAA CAAGCAGAAG AGTAATGGCG 60
GAAACAATAC CCTTCAAAAA TCTTCATAGC AGAGAGTACC AGGGACACAA GAAGAAGGTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0000445--C:THO complex part of transcription export complex
GO:0006406--P:mRNA export from nucleus
GO:0010267--P:production of ta-siRNAs involved in RNA interference

KEGG

sly:101265940

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000099	Aegilops tauschii	79.05	1.00e-146	511.00
IUUC-Aml-001264	Ailuropoda melanoleuca	50.99	4.00e-93	333.00
IUUC-Atr-003050	Amborella trichopoda	89.07	2.00e-172	597.00
IUUC-Apl-003426	Anas platyrhynchos	44.27	5.00e-65	239.00
IUUC-Aca-004931	Anolis carolinensis	49.08	1.00e-64	238.00
IUUC-Aly-006237	Arabidopsis lyrata	86.82	6.00e-168	582.00
IUUC-Ath-007581	Arabidopsis thaliana	87.14	6.00e-168	582.00
IUUC-Acl-008253	Aspergillus clavatus	29.33	5.00e-42	164.00
IUUC-Afl-008519	Aspergillus flavus	34.26	4.00e-45	174.00
IUUC-Afu-008886	Aspergillus fumigatus	28.95	6.00e-38	150.00
IUUC-Ani-009275	Aspergillus nidulans	30.28	1.00e-41	163.00
IUUC-Ang-009862	Aspergillus niger	31.92	7.00e-43	166.00
IUUC-Ate-010247	Aspergillus terreus	31.33	4.00e-42	164.00
IUUC-Ame-010828	Astyanax mexicanus	51.15	1.00e-94	338.00
IUUC-Bgr-012163	Blumeria graminis	33.06	3.00e-35	140.00
IUUC-Bta-013514	Bos taurus	44.37	1.00e-77	282.00
IUUC-Bci-013639	Botrytis cinerea	30.04	1.00e-42	166.00
IUUC-Bdi-015049	Brachypodium distachyon	78.91	4.00e-152	529.00
IUUC-Bol-015401	Brassica oleracea	82.87	4.00e-162	562.00
IUUC-Bra-017867	Brassica rapa	83.18	2.00e-162	564.00
IUUC-Cel-018699	Caenorhabditis elegans	28.57	2.00e-33	135.00
IUUC-Cja-019591	Callithrix jacchus	50.99	2.00e-93	334.00
IUUC-Cfa-020692	Canis familiaris	50.99	2.00e-93	334.00
IUUC-Cpo-022135	Cavia porcellus	44.26	5.00e-73	267.00
IUUC-Cre-022572	Chlamydomonas reinhardtii	33.88	6.00e-47	180.00
IUUC-Csa-023408	Chlorocebus sabaeus	50.99	3.00e-93	334.00
IUUC-Cho-024340	Choloepus hoffmanni	49.26	1.00e-57	214.00
IUUC-Cin-025418	Ciona intestinalis	51.13	1.00e-41	160.00
IUUC-Csv-026130	Ciona savignyi	52.15	9.00e-98	348.00
IUUC-Cgl-026744	Colletotrichum gloeosporioides	31.39	6.00e-46	176.00
IUUC-Cne-026775	Cryptococcus neoformans	40.20	3.00e-20	92.40
IUUC-Dre-028634	Danio rerio	51.48	3.00e-95	340.00
IUUC-Dno-029449	Dasypus novemcinctus	50.99	2.00e-93	334.00
IUUC-Dor-030301	Dipodomys ordii	54.84	2.00e-52	198.00
IUUC-Dse-031341	Dothistroma septosporum	29.27	5.00e-35	140.00
IUUC-Dme-031674	Drosophila melanogaster	50.84	9.00e-83	299.00
IUUC-Ete-033136	Echinops telfairi	50.99	2.00e-92	331.00
IUUC-Eca-034432	Equus caballus	45.90	3.00e-83	301.00
IUUC-Fca-035694	Felis catus	50.99	2.00e-93	334.00
IUUC-Fal-037328	Ficedula albicollis	50.82	3.00e-94	337.00
IUUC-Fox-037894	Fusarium oxysporum	31.29	9.00e-48	183.00
IUUC-Fso-038266	Fusarium solani	29.82	5.00e-44	170.00
IUUC-Gmo-039617	Gadus morhua	50.82	1.00e-92	332.00
IUUC-Ggr-039819	Gaeumannomyces graminis	29.90	2.00e-37	149.00
IUUC-Gga-041164	Gallus gallus	50.82	8.00e-94	336.00
IUUC-Gac-042407	Gasterosteus aculeatus	51.15	5.00e-94	336.00
IUUC-Gma-043718	Glycine max	88.50	2.00e-172	597.00
IUUC-Ggo-044989	Gorilla gorilla	50.99	2.00e-93	334.00
IUUC-Hsa-046784	Homo sapiens	50.99	3.00e-93	334.00
IUUC-Hvu-047633	Hordeum vulgare	80.00	3.00e-105	373.00
IUUC-Itr-048184	Ictidomys tridecemlineatus	38.49	2.00e-54	204.00
IUUC-Kpa-049182	Komagataella pastoris	23.73	7.00e-15	73.90
IUUC-Lch-049894	Latimeria chalumnae	50.82	2.00e-93	335.00
IUUC-Lpe-051061	Leersia perrieri	69.35	2.00e-126	444.00
IUUC-Loc-052424	Lepisosteus oculatus	50.82	6.00e-94	336.00
IUUC-Lma-053127	Leptosphaeria maculans	31.79	5.00e-47	181.00
IUUC-Laf-053396	Loxodonta africana	51.32	1.00e-93	335.00
IUUC-Mcc-055517	Macaca mulatta	50.99	2.00e-93	334.00
IUUC-Meu-056034	Macropus eugenii	50.99	4.00e-93	333.00
IUUC-Mor-057011	Magnaporthe oryzae	29.02	4.00e-25	107.00
IUUC-Mpo-057490	Magnaporthe poae	29.81	2.00e-37	148.00
IUUC-Mtr-057927	Medicago truncatula	86.90	6.00e-169	585.00
IUUC-Mla-058945	Melampsora laricipopulina	36.86	1.00e-48	186.00
IUUC-Mga-060155	Meleagris gallopavo	52.28	3.00e-78	283.00
IUUC-Mvi-060344	Microbotryum violaceum	32.37	8.00e-45	173.00
IUUC-Mmr-060834	Microcebus murinus	51.32	2.00e-93	334.00
IUUC-Mdo-062587	Monodelphis domestica	50.99	4.00e-93	333.00
IUUC-Mmu-063395	Mus musculus	50.99	2.00e-93	334.00
IUUC-Mac-064579	Musa acuminata	86.08	6.00e-167	578.00
IUUC-Mpu-066688	Mustela putorius furo	53.75	4.00e-84	303.00
IUUC-Mlu-067299	Myotis lucifugus	50.99	6.00e-93	333.00
IUUC-Nfi-068562	Neosartorya fischeri	29.94	3.00e-40	158.00
IUUC-Ncr-068654	Neurospora crassa	31.70	1.00e-39	155.00
IUUC-Nle-069736	Nomascus leucogenys	50.33	7.00e-91	326.00
IUUC-Ont-071763	Oreochromis niloticus	50.82	7.00e-94	336.00
IUUC-Ocu-074909	Oryctolagus cuniculus	50.99	2.00e-93	335.00
IUUC-Oba-075902	Oryza barthii	70.00	6.00e-127	446.00
IUUC-Obr-076613	Oryza brachyantha	78.06	2.00e-147	514.00
IUUC-Ogl-077009	Oryza glaberrima	77.74	2.00e-147	514.00
IUUC-Ogu-078344	Oryza glumaepatula	70.00	6.00e-127	446.00
IUUC-Oin-079773	Oryza indica	77.74	2.00e-147	514.00
IUUC-Olo-080474	Oryza longistaminata	73.63	6.00e-86	308.00
IUUC-Ome-081837	Oryza meridionalis	66.46	6.00e-59	218.00
IUUC-Oni-082263	Oryza nivara	70.00	6.00e-127	446.00
IUUC-Opu-083813	Oryza punctata	78.06	3.00e-148	516.00
IUUC-Oru-084610	Oryza rufipogon	70.00	4.00e-127	446.00
IUUC-Osa-085415	Oryza sativa	77.42	6.00e-147	512.00
IUUC-Ola-086659	Oryzias latipes	51.15	6.00e-94	336.00
IUUC-Olu-087649	Ostreococcus lucimarinus	40.55	1.00e-61	229.00
IUUC-Oga-087923	Otolemur garnettii	50.66	6.00e-93	333.00
IUUC-Oar-089688	Ovis aries	50.99	7.00e-93	333.00
IUUC-Ptr-091628	Pan troglodytes	50.99	3.00e-93	334.00
IUUC-Pan-092586	Papio anubis	50.49	1.00e-91	328.00
IUUC-Psi-093701	Pelodiscus sinensis	51.81	6.00e-62	229.00
IUUC-Pma-094465	Petromyzon marinus	51.15	4.00e-92	330.00
IUUC-Pno-094767	Phaeosphaeria nodorum	31.85	3.00e-43	169.00
IUUC-Ppa-095195	Physcomitrella patens	85.90	8.00e-163	565.00
IUUC-Pfo-097383	Poecilia formosa	50.49	6.00e-93	333.00
IUUC-Pab-098669	Pongo abelii	50.99	3.00e-93	334.00
IUUC-Pop-099409	Populus trichocarpa	88.82	2.00e-173	600.00
IUUC-Pca-100769	Procavia capensis	44.44	7.00e-72	263.00
IUUC-Ppe-101321	Prunus persica	87.38	5.00e-170	589.00
IUUC-Pva-102759	Pteropus vampyrus	50.99	2.00e-93	335.00
IUUC-Pgr-103535	Puccinia graminis	38.46	1.00e-54	206.00
IUUC-Ptt-103820	Puccinia triticina	38.14	8.00e-55	206.00
IUUC-Pte-104271	Pyrenophora teres	31.75	1.00e-40	159.00
IUUC-Pyt-104500	Pyrenophora triticirepentis	32.92	1.00e-38	153.00
IUUC-Rno-106126	Rattus norvegicus	50.99	2.00e-93	335.00
IUUC-Sce-106455	Saccharomyces cerevisiae	23.13	2.00e-12	66.20
IUUC-Sha-107146	Sarcophilus harrisii	50.00	2.00e-90	324.00
IUUC-Sja-107865	Schizosaccharomyces japonicus	35.14	4.00e-55	207.00
IUUC-Spo-108324	Schizosaccharomyces pombe	34.73	1.00e-54	205.00
IUUC-Smo-108990	Selaginella moellendorffii	79.62	7.00e-156	542.00
IUUC-Sit-110773	Setaria italica	77.12	3.00e-145	506.00
IUUC-Stu-112241	Solanum tuberosum	99.04	0.00e+00	651.00
IUUC-Sbi-114842	Sorghum bicolor	76.14	5.00e-143	499.00
IUUC-Sre-115070	Sporisorium reilianum	33.73	2.00e-50	191.00
IUUC-Ssc-115581	Sus scrofa	50.99	2.00e-93	334.00
IUUC-Tgu-117354	Taeniopygia guttata	51.19	1.00e-90	325.00
IUUC-Tru-117745	Takifugu rubripes	49.68	3.00e-92	330.00
IUUC-Tni-120050	Tetraodon nigroviridis	49.35	2.00e-90	325.00
IUUC-Tca-121279	Theobroma cacao	89.78	3.00e-174	603.00
IUUC-Tre-121952	Trichoderma reesei	32.60	7.00e-49	186.00
IUUC-Tvi-122581	Trichoderma virens	32.31	2.00e-49	189.00
IUUC-Tae-125697	Triticum aestivum	77.96	1.00e-150	525.00
IUUC-Tur-126279	Triticum urartu	75.56	7.00e-145	505.00
IUUC-Tme-127000	Tuber melanosporum	32.58	1.00e-41	162.00
IUUC-Ttr-128405	Tursiops truncatus	51.55	1.00e-81	295.00
IUUC-Uma-129547	Ustilago maydis	35.21	3.00e-49	188.00
IUUC-Vda-129689	Verticillium dahliae	29.49	1.00e-38	152.00
IUUC-Vvi-131345	Vitis vinifera	90.73	3.00e-176	609.00
IUUC-Xtr-132136	Xenopus tropicalis	49.67	8.00e-91	326.00
IUUC-Xma-133767	Xiphophorus maculatus	50.49	7.00e-93	332.00
IUUC-Yli-134522	Yarrowia lipolytica	27.35	3.00e-29	121.00
IUUC-Zma-135816	Zea mays	74.84	7.00e-141	492.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence