iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ppa-095505

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Predicted protein

Genbank Nucleotide ID

DS545001

Gene Name

PHYPADRAFT_134511

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PP1S112_45V6	PP1S112_45V6.1	PP1S112_45V6.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-15	56.0	2547	2579

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           H++svt     ++ +++ +Gs Dg ik+WD++t
   Q: 2547 HSGSVTRATSvPGtPYFFTGSKDGDIKLWDVST 2579
           888888865356679***************976 PP

Organism

Physcomitrella patens

Protein Sequence
(Fasta)

MSSSLPGSPY ELSIQQDLPP APNVGTQCAD WLPRFAGSSW LAYAASSAIV IATAASPLNS 60
GESSSGRFFQ QVLETRTNND GDDCIGRSLV TSVGWAPVGS SVGQLAAACG NTLLLYSPTT 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTCTT CCTTGCCGGG ATCACCGTAT GAGCTCTCAA TTCAGCAAGA CCTTCCTCCT 60
GCACCAAATG TTGGAACACA ATGCGCAGAT TGGTTGCCCC GATTTGCAGG CTCAAGCTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0043291--C:RAVE complex
GO:0007035--P:vacuolar acidification
GO:0070072--P:vacuolar proton-transporting V-type ATPase complex assembly

KEGG

ppp:PHYPADRAFT_134511

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000362	Aegilops tauschii	42.33	2.00e-32	130.00
IUUC-Aml-001296	Ailuropoda melanoleuca	28.48	9.00e-39	156.00
IUUC-Atr-002754	Amborella trichopoda	46.83	1.00e-122	432.00
IUUC-Apl-003695	Anas platyrhynchos	25.08	2.00e-38	155.00
IUUC-Aca-004516	Anolis carolinensis	38.81	6.00e-36	147.00
IUUC-Aly-006404	Arabidopsis lyrata	43.92	1.00e-110	395.00
IUUC-Ath-006612	Arabidopsis thaliana	45.68	1.00e-107	385.00
IUUC-Afu-009077	Aspergillus fumigatus	32.03	3.00e-39	157.00
IUUC-Ani-009437	Aspergillus nidulans	25.96	6.00e-39	155.00
IUUC-Ang-009742	Aspergillus niger	24.47	9.00e-39	155.00
IUUC-Ame-010919	Astyanax mexicanus	26.52	8.00e-44	173.00
IUUC-Bta-013088	Bos taurus	37.00	1.00e-35	146.00
IUUC-Bdi-014471	Brachypodium distachyon	44.00	2.00e-103	369.00
IUUC-Bol-016375	Brassica oleracea	30.30	4.00e-158	553.00
IUUC-Bra-016630	Brassica rapa	28.00	1.00e-165	578.00
IUUC-Cel-018537	Caenorhabditis elegans	33.33	1.00e-29	126.00
IUUC-Cja-018770	Callithrix jacchus	28.73	9.00e-40	160.00
IUUC-Cfa-021089	Canis familiaris	29.65	8.00e-39	157.00
IUUC-Cpo-022459	Cavia porcellus	25.68	1.00e-38	156.00
IUUC-Csa-023972	Chlorocebus sabaeus	28.94	2.00e-40	162.00
IUUC-Cho-024762	Choloepus hoffmanni	32.98	9.00e-35	143.00
IUUC-Csv-026055	Ciona savignyi	26.54	6.00e-41	163.00
IUUC-Dre-028673	Danio rerio	26.10	1.00e-39	159.00
IUUC-Dno-029855	Dasypus novemcinctus	28.18	7.00e-30	127.00
IUUC-Dor-030381	Dipodomys ordii	37.50	2.00e-35	145.00
IUUC-Dme-031825	Drosophila melanogaster	26.01	7.00e-38	154.00
IUUC-Ete-033176	Echinops telfairi	28.83	1.00e-38	155.00
IUUC-Eca-033386	Equus caballus	28.94	9.00e-40	160.00
IUUC-Eeu-035011	Erinaceus europaeus	28.25	5.00e-33	137.00
IUUC-Fca-036411	Felis catus	30.18	1.00e-40	162.00
IUUC-Fal-036643	Ficedula albicollis	23.28	2.00e-38	155.00
IUUC-Gmo-038687	Gadus morhua	27.03	4.00e-37	151.00
IUUC-Gga-040765	Gallus gallus	25.08	1.00e-38	156.00
IUUC-Gac-041986	Gasterosteus aculeatus	27.64	2.00e-38	155.00
IUUC-Gma-044099	Glycine max	47.66	1.00e-123	438.00
IUUC-Ggo-045379	Gorilla gorilla	28.88	4.00e-40	161.00
IUUC-Hsa-046758	Homo sapiens	28.88	2.00e-40	161.00
IUUC-Hvu-047213	Hordeum vulgare	48.78	3.00e-81	294.00
IUUC-Itr-047982	Ictidomys tridecemlineatus	29.00	2.00e-39	159.00
IUUC-Lch-050020	Latimeria chalumnae	38.31	1.00e-35	145.00
IUUC-Lpe-051382	Leersia perrieri	26.92	3.00e-121	430.00
IUUC-Loc-052909	Lepisosteus oculatus	26.50	1.00e-37	152.00
IUUC-Laf-054102	Loxodonta africana	29.14	7.00e-40	160.00
IUUC-Mcc-055533	Macaca mulatta	29.15	1.00e-40	163.00
IUUC-Meu-056627	Macropus eugenii	27.71	3.00e-23	105.00
IUUC-Mtr-058725	Medicago truncatula	42.83	2.00e-118	421.00
IUUC-Mga-059386	Meleagris gallopavo	28.32	2.00e-37	152.00
IUUC-Mmr-060784	Microcebus murinus	29.00	5.00e-38	154.00
IUUC-Mdo-062837	Monodelphis domestica	24.72	3.00e-33	138.00
IUUC-Mmu-063696	Mus musculus	25.65	1.00e-39	159.00
IUUC-Mac-065224	Musa acuminata	29.48	1.00e-175	611.00
IUUC-Mpu-066054	Mustela putorius furo	28.76	1.00e-38	155.00
IUUC-Mlu-068235	Myotis lucifugus	28.92	2.00e-38	155.00
IUUC-Nfi-068420	Neosartorya fischeri	31.67	8.00e-38	152.00
IUUC-Nle-069401	Nomascus leucogenys	28.88	3.00e-40	161.00
IUUC-Opr-070543	Ochotona princeps	25.41	3.00e-20	95.50
IUUC-Ont-071658	Oreochromis niloticus	25.12	6.00e-42	167.00
IUUC-Oan-072796	Ornithorhynchus anatinus	27.54	9.00e-13	65.90
IUUC-Ocu-074711	Oryctolagus cuniculus	28.38	7.00e-40	160.00
IUUC-Oba-075826	Oryza barthii	26.82	7.00e-163	568.00
IUUC-Obr-076145	Oryza brachyantha	26.71	6.00e-160	558.00
IUUC-Ogu-078307	Oryza glumaepatula	26.73	2.00e-160	560.00
IUUC-Oin-080118	Oryza indica	28.18	3.00e-156	546.00
IUUC-Olo-080848	Oryza longistaminata	30.35	5.00e-110	392.00
IUUC-Oni-082792	Oryza nivara	46.22	9.00e-116	412.00
IUUC-Opu-084153	Oryza punctata	26.77	1.00e-114	408.00
IUUC-Oru-084415	Oryza rufipogon	27.94	8.00e-116	412.00
IUUC-Osa-085332	Oryza sativa	46.64	2.00e-114	405.00
IUUC-Ola-086945	Oryzias latipes	24.52	1.00e-36	149.00
IUUC-Oga-088816	Otolemur garnettii	26.24	2.00e-39	159.00
IUUC-Oar-090063	Ovis aries	28.54	2.00e-38	155.00
IUUC-Ptr-091058	Pan troglodytes	28.88	2.00e-40	162.00
IUUC-Pan-092151	Papio anubis	26.37	3.00e-37	151.00
IUUC-Psi-093590	Pelodiscus sinensis	26.60	2.00e-38	155.00
IUUC-Pfo-097445	Poecilia formosa	28.89	2.00e-35	145.00
IUUC-Pab-098507	Pongo abelii	28.94	4.00e-40	161.00
IUUC-Pop-098812	Populus trichocarpa	28.56	1.00e-173	603.00
IUUC-Pca-101008	Procavia capensis	28.00	5.00e-37	150.00
IUUC-Ppe-101610	Prunus persica	45.87	3.00e-121	430.00
IUUC-Pva-102432	Pteropus vampyrus	28.70	7.00e-39	157.00
IUUC-Rno-104981	Rattus norvegicus	25.98	1.00e-40	162.00
IUUC-Sha-106955	Sarcophilus harrisii	29.62	2.00e-39	159.00
IUUC-Sja-107657	Schizosaccharomyces japonicus	32.14	8.00e-31	129.00
IUUC-Smo-109573	Selaginella moellendorffii	49.78	4.00e-113	400.00
IUUC-Sit-109981	Setaria italica	41.30	4.00e-100	359.00
IUUC-Sly-110968	Solanum lycopersicum	26.79	2.00e-156	546.00
IUUC-Stu-111939	Solanum tuberosum	50.57	5.00e-50	189.00
IUUC-Sar-113751	Sorex araneus	28.77	1.00e-21	100.00
IUUC-Sbi-113768	Sorghum bicolor	48.28	4.00e-41	159.00
IUUC-Ssc-116371	Sus scrofa	26.84	4.00e-38	154.00
IUUC-Tgu-117108	Taeniopygia guttata	23.96	1.00e-39	159.00
IUUC-Tru-117628	Takifugu rubripes	26.07	6.00e-41	164.00
IUUC-Tsy-118837	Tarsius syrichta	27.87	6.00e-35	144.00
IUUC-Tni-120709	Tetraodon nigroviridis	24.76	8.00e-39	156.00
IUUC-Tca-121789	Theobroma cacao	45.36	8.00e-114	405.00
IUUC-Tae-125726	Triticum aestivum	43.05	1.00e-111	398.00
IUUC-Tur-126437	Triticum urartu	30.56	1.00e-36	147.00
IUUC-Tbe-127760	Tupaia belangeri	30.09	2.00e-39	159.00
IUUC-Ttr-128323	Tursiops truncatus	30.31	6.00e-39	157.00
IUUC-Vpa-130118	Vicugna pacos	28.24	2.00e-33	139.00
IUUC-Vvi-131584	Vitis vinifera	47.17	2.00e-117	417.00
IUUC-Xtr-132638	Xenopus tropicalis	28.35	5.00e-38	154.00
IUUC-Xma-134109	Xiphophorus maculatus	28.81	9.00e-37	150.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence