iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mtr-057876

Ensembl Protein ID

AES76143

UniProt Accession

G7KHW1; A0A0C3VXP5; G7KHW1_MEDTR

Genbank Protein ID

AES76143.2

Protein Name

Nucleoporin seh1-like protein

Genbank Nucleotide ID

CM001222

Gene Name

MTR_6g072020

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
MTR_6g072020	AES76143	AES76143

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-12	48.6	281	311

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH++ v+ +++  s+ +l++ ++Dg +++W 
   Q: 281  GHEGAVWQMEWdmSGMTLATTGNDGMVRLWQ 311
           8**********8877669************5 PP

Organism

Medicago truncatula

Protein Sequence
(Fasta)

MAKELLSLDN GTTCSSWNYS STRLATGSTD ATFQIFDFKD PPSSSSNSLR SSFKSKVHEG 60
NIVKIVWFPP EYGDAVACVS ADGIVSLLEE IVEDSQPLQW KVRKTLGSSA SKVLDVQFGI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CGTTCAAACC CAAAACCCCT TTTCAAAATC TGCACCGTTC AGCCTCCAAC CTGCGAAGTG 60
CGAACCCTCT TCAACCACCA CTCTAATTTT GTCATAAATG TGTTGCAACC AATAACTTGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005635--C:nuclear envelope

KEGG

mtr:MTR_6g072020

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003124	Amborella trichopoda	65.20	4.00e-81	293.00
IUUC-Apl-003654	Anas platyrhynchos	28.21	2.00e-27	116.00
IUUC-Aca-004378	Anolis carolinensis	28.21	2.00e-27	115.00
IUUC-Aly-005963	Arabidopsis lyrata	65.14	1.00e-123	435.00
IUUC-Ath-007107	Arabidopsis thaliana	64.53	4.00e-125	439.00
IUUC-Bdi-014594	Brachypodium distachyon	55.42	3.00e-106	377.00
IUUC-Bol-016565	Brassica oleracea	65.95	7.00e-125	439.00
IUUC-Bra-017831	Brassica rapa	65.85	2.00e-125	441.00
IUUC-Cho-024660	Choloepus hoffmanni	26.91	5.00e-26	111.00
IUUC-Eca-033425	Equus caballus	26.71	6.00e-26	110.00
IUUC-Fal-037234	Ficedula albicollis	28.21	5.00e-27	117.00
IUUC-Gma-044300	Glycine max	84.45	4.00e-155	539.00
IUUC-Hvu-047455	Hordeum vulgare	54.49	2.00e-105	375.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	26.91	2.00e-26	112.00
IUUC-Lpe-051064	Leersia perrieri	55.73	2.00e-106	377.00
IUUC-Meu-055958	Macropus eugenii	26.58	3.00e-15	75.50
IUUC-Mla-058820	Melampsora laricipopulina	24.93	2.00e-17	82.40
IUUC-Mga-059348	Meleagris gallopavo	28.21	1.00e-27	116.00
IUUC-Mac-064960	Musa acuminata	58.15	1.00e-104	372.00
IUUC-Nle-068977	Nomascus leucogenys	26.91	1.00e-26	112.00
IUUC-Oan-073098	Ornithorhynchus anatinus	27.64	9.00e-28	116.00
IUUC-Oba-075325	Oryza barthii	51.70	6.00e-95	340.00
IUUC-Obr-076089	Oryza brachyantha	55.42	2.00e-103	368.00
IUUC-Ogl-077279	Oryza glaberrima	54.80	3.00e-104	370.00
IUUC-Ogu-078901	Oryza glumaepatula	51.70	4.00e-95	340.00
IUUC-Oin-079385	Oryza indica	53.10	1.00e-102	365.00
IUUC-Ome-081809	Oryza meridionalis	61.40	3.00e-100	358.00
IUUC-Oni-082185	Oryza nivara	50.46	2.00e-91	327.00
IUUC-Opu-083324	Oryza punctata	53.87	5.00e-99	353.00
IUUC-Oru-084801	Oryza rufipogon	55.11	6.00e-105	373.00
IUUC-Osa-085790	Oryza sativa	54.80	3.00e-104	370.00
IUUC-Oar-090298	Ovis aries	26.91	3.00e-25	112.00
IUUC-Psi-093508	Pelodiscus sinensis	28.21	3.00e-27	115.00
IUUC-Ppa-095228	Physcomitrella patens	43.61	3.00e-65	241.00
IUUC-Pop-099015	Populus trichocarpa	67.07	1.00e-128	451.00
IUUC-Ppe-101303	Prunus persica	72.64	6.00e-141	492.00
IUUC-Rno-104895	Rattus norvegicus	29.09	9.00e-29	123.00
IUUC-Sha-106829	Sarcophilus harrisii	27.27	1.00e-27	116.00
IUUC-Smo-108721	Selaginella moellendorffii	38.94	4.00e-63	234.00
IUUC-Sit-110393	Setaria italica	55.42	3.00e-106	377.00
IUUC-Sly-111125	Solanum lycopersicum	66.46	3.00e-125	440.00
IUUC-Stu-112745	Solanum tuberosum	60.11	4.00e-122	430.00
IUUC-Sar-113279	Sorex araneus	26.55	5.00e-26	111.00
IUUC-Sbi-114110	Sorghum bicolor	55.73	2.00e-108	384.00
IUUC-Ssc-115589	Sus scrofa	26.81	3.00e-26	111.00
IUUC-Tru-117985	Takifugu rubripes	27.74	2.00e-25	112.00
IUUC-Tsy-118913	Tarsius syrichta	26.04	2.00e-22	99.40
IUUC-Tca-120999	Theobroma cacao	60.22	9.00e-117	414.00
IUUC-Tae-122796	Triticum aestivum	54.97	2.00e-106	378.00
IUUC-Tur-126582	Triticum urartu	57.30	8.00e-97	346.00
IUUC-Tbe-127344	Tupaia belangeri	24.77	5.00e-16	78.20
IUUC-Ttr-128347	Tursiops truncatus	26.91	2.00e-26	112.00
IUUC-Vpa-130656	Vicugna pacos	27.27	9.00e-27	113.00
IUUC-Vvi-131103	Vitis vinifera	72.56	9.00e-144	502.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence