iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ppe-101303

Ensembl Protein ID

EMJ10552

UniProt Accession

M5W9X2; M5W9X2_PRUPE

Genbank Protein ID

EMJ10552.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

KB639086

Gene Name

SEH1H; PRUPE_ppa008587mg

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PRUPE_ppa008587mg	EMJ10552	EMJ10552

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-15	57.0	279	309

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWD 29
           gH+++v+ +++  s+ +l++ ++Dg +++W 
   Q: 279  GHNGEVWQMEWdmSGMTLATTGNDGAVRLWQ 309
           8**********8877669************5 PP

Organism

Prunus persica

Protein Sequence
(Fasta)

MEKPLVALDK GTTCSSWNYS SQRLATGSVD GTLAIFDTRD PASSSFSCTS KSKVHEAAGI 60
VKIVWVPPEY GDAVACVCAD GTLSLWEEAA EDAQPIQWKL CTSFKSGSAQ LLDTQFGVSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATCTAGAATT TTTAGAGGCT TTTGAAAGAC ATATTTCTGG GTGGACCCGT TCTGAGTCTA 60
AACCGACCCG ACTAAAACCC TGCCCCAACG TTTACCAAAA CCCTACACGA AGAGGTTTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005635--C:nuclear envelope

KEGG

pper:PRUPE_ppa008587mg

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-003124	Amborella trichopoda	72.14	3.00e-88	316.00
IUUC-Apl-003654	Anas platyrhynchos	27.17	1.00e-26	112.00
IUUC-Aca-004378	Anolis carolinensis	26.09	3.00e-26	111.00
IUUC-Aly-005963	Arabidopsis lyrata	67.08	1.00e-127	448.00
IUUC-Ath-007107	Arabidopsis thaliana	68.31	2.00e-130	457.00
IUUC-Bdi-014594	Brachypodium distachyon	59.94	1.00e-115	408.00
IUUC-Bol-016565	Brassica oleracea	66.67	1.00e-125	441.00
IUUC-Bra-017831	Brassica rapa	66.56	6.00e-126	442.00
IUUC-Cho-024660	Choloepus hoffmanni	24.64	3.00e-25	108.00
IUUC-Eca-033425	Equus caballus	25.28	2.00e-25	108.00
IUUC-Fal-037234	Ficedula albicollis	26.97	5.00e-26	113.00
IUUC-Gma-044300	Glycine max	73.93	6.00e-141	492.00
IUUC-Hvu-047455	Hordeum vulgare	59.32	2.00e-114	404.00
IUUC-Itr-048858	Ictidomys tridecemlineatus	24.72	7.00e-26	110.00
IUUC-Lpe-051064	Leersia perrieri	60.87	1.00e-117	415.00
IUUC-Meu-055958	Macropus eugenii	26.70	3.00e-19	88.20
IUUC-Mtr-057876	Medicago truncatula	72.64	1.00e-140	491.00
IUUC-Mla-058820	Melampsora laricipopulina	25.77	7.00e-14	70.50
IUUC-Mga-059348	Meleagris gallopavo	27.34	7.00e-27	113.00
IUUC-Mac-064960	Musa acuminata	62.65	2.00e-117	414.00
IUUC-Nle-068977	Nomascus leucogenys	24.64	7.00e-26	110.00
IUUC-Oan-073098	Ornithorhynchus anatinus	25.47	4.00e-27	114.00
IUUC-Oba-075325	Oryza barthii	57.45	2.00e-104	370.00
IUUC-Obr-076089	Oryza brachyantha	60.25	6.00e-112	395.00
IUUC-Ogl-077279	Oryza glaberrima	60.25	3.00e-115	406.00
IUUC-Ogu-078901	Oryza glumaepatula	57.45	2.00e-104	370.00
IUUC-Oin-079385	Oryza indica	56.76	3.00e-114	403.00
IUUC-Ome-081809	Oryza meridionalis	66.42	4.00e-110	391.00
IUUC-Oni-082185	Oryza nivara	56.21	3.00e-100	357.00
IUUC-Opu-083324	Oryza punctata	58.70	4.00e-109	386.00
IUUC-Oru-084801	Oryza rufipogon	60.56	7.00e-116	409.00
IUUC-Osa-085790	Oryza sativa	60.25	3.00e-115	406.00
IUUC-Olu-087855	Ostreococcus lucimarinus	25.09	2.00e-11	62.80
IUUC-Oar-090298	Ovis aries	24.72	1.00e-24	109.00
IUUC-Psi-093508	Pelodiscus sinensis	26.81	1.00e-26	112.00
IUUC-Ppa-095228	Physcomitrella patens	46.56	1.00e-71	262.00
IUUC-Pop-099015	Populus trichocarpa	74.85	1.00e-143	501.00
IUUC-Rno-104895	Rattus norvegicus	27.34	1.00e-29	125.00
IUUC-Sha-106829	Sarcophilus harrisii	25.09	6.00e-27	114.00
IUUC-Smo-109282	Selaginella moellendorffii	41.18	9.00e-70	256.00
IUUC-Sit-110393	Setaria italica	59.94	1.00e-114	405.00
IUUC-Sly-111125	Solanum lycopersicum	71.17	1.00e-136	478.00
IUUC-Stu-112745	Solanum tuberosum	64.56	1.00e-134	471.00
IUUC-Sar-113279	Sorex araneus	24.28	2.00e-25	108.00
IUUC-Sbi-114110	Sorghum bicolor	59.01	3.00e-115	407.00
IUUC-Ssc-115589	Sus scrofa	25.45	8.00e-26	110.00
IUUC-Tru-117985	Takifugu rubripes	26.69	1.00e-25	112.00
IUUC-Tsy-118913	Tarsius syrichta	24.03	2.00e-22	99.00
IUUC-Tca-120999	Theobroma cacao	68.22	7.00e-134	470.00
IUUC-Tae-122796	Triticum aestivum	61.39	2.00e-116	411.00
IUUC-Tur-126582	Triticum urartu	62.90	1.00e-106	378.00
IUUC-Tbe-127344	Tupaia belangeri	25.22	5.00e-18	84.70
IUUC-Ttr-128347	Tursiops truncatus	24.64	1.00e-25	109.00
IUUC-Vpa-130656	Vicugna pacos	25.00	8.00e-26	110.00
IUUC-Vvi-131103	Vitis vinifera	81.29	1.00e-156	544.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence