iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tgu-116807

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABQF01122858

Gene Name

EML6

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTGUG00000007118.1	ENSTGUT00000007460.1	ENSTGUP00000007385.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	5.30e-64	209.1	105	143
UBD/Beta-Prp	1.90e-134	447.4	57	264

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdD..gtikvWDlrtgvll 36
           Ht +v claf sd  +l+s + D  +t+ +WD+++g+ll
   Q: 105  HTHGVACLAFdSDgQRLASVGLDakNTVCIWDWKRGKLL 143
           9**********999*******9999*********99987 PP

UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatg..srdgtikvwdvttgkllrsl.sgheaevtavkfspdgkilvtgseD..rtikvwdlstgkcvh 88
           + gh+++ i+ ++++pdk+l+atg  ++d  i +wd  + ++++ l   h+ +v+++ f++dg+ l++++ D  +t+++wd + gk + 
   Q: 57   FLGHNDDIIS-LAVHPDKTLVATGqvGKDPYICIWDSYRVQTVSLLkDAHTHGVACLAFDSDGQRLASVGLDakNTVCIWDWKRGKLLA 144
           5578888888.************95558999***************888**************************************** PP
   S: 89   tlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqclee..tlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllr 173
           t +gh+d++ ++s+++++ +++vs + ++ i+ w l  +    +  ++ ++ ++ +++++ + + ++  sG+l++ + +W+    +l+r
   Q: 145  TATGHSDRIFDISWDQYQpNRIVSCG-VKHIKFWTLCGNALTAKrgIFGKTGDLQTILCLACAKeDITYSGALNGDIYVWKG--LNLVR 230
           ****************8868888877.*******99999999889976666666666666666669**************66..99*** PP
   S: 174  tltgghtdsvyslsfdsngkelvsgsldgtvklwdl 209
           t +g+h   + s+   ++g  +++g++dg ++lwd 
   Q: 231  TIQGAHSAGIFSMYACEEG--FATGGRDGCIRLWDT 264
           *************999965..*************96 PP

Organism

Taeniopygia guttata

Protein Sequence
(Fasta)

MADRTAPRCQ LRLEWVYGYR GHQCRNNLYY TAGKEVVYFV AGVGVVYNTR EHSQKFFLGH 60
NDDIISLAVH PDKTLVATGQ VGKDPYICIW DSYRVQTVSL LKDAHTHGVA CLAFDSDGQR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGGATC GGACGGCTCC GCGCTGCCAG CTCCGGCTGG AGTGGGTGTA CGGCTACCGG 60
GGCCACCAGT GCCGCAACAA CCTGTACTAC ACGGCAGGGA AAGAGGTAGT GTACTTCGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR024977--Apc4_WD40_dom
IPR005108--HELP
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001387	Ailuropoda melanoleuca	93.97	0.00e+00	3729.00
IUUC-Apl-003604	Anas platyrhynchos	97.41	0.00e+00	3814.00
IUUC-Aca-004572	Anolis carolinensis	90.31	0.00e+00	3604.00
IUUC-Ame-010713	Astyanax mexicanus	80.03	0.00e+00	3218.00
IUUC-Bta-012812	Bos taurus	94.02	0.00e+00	3728.00
IUUC-Cja-019191	Callithrix jacchus	93.44	0.00e+00	3683.00
IUUC-Cfa-020041	Canis familiaris	93.94	0.00e+00	3459.00
IUUC-Cpo-022304	Cavia porcellus	71.88	0.00e+00	2852.00
IUUC-Cre-022931	Chlamydomonas reinhardtii	34.87	2.00e-103	372.00
IUUC-Csa-023689	Chlorocebus sabaeus	92.83	0.00e+00	3594.00
IUUC-Cho-025038	Choloepus hoffmanni	91.91	0.00e+00	1419.00
IUUC-Cin-025205	Ciona intestinalis	62.47	0.00e+00	2572.00
IUUC-Csv-026014	Ciona savignyi	63.34	0.00e+00	2581.00
IUUC-Dre-028772	Danio rerio	73.98	0.00e+00	3066.00
IUUC-Dno-029982	Dasypus novemcinctus	92.03	0.00e+00	3546.00
IUUC-Dor-030980	Dipodomys ordii	69.97	0.00e+00	1300.00
IUUC-Ete-032554	Echinops telfairi	72.45	0.00e+00	837.00
IUUC-Eca-034161	Equus caballus	92.32	0.00e+00	3555.00
IUUC-Eeu-035180	Erinaceus europaeus	63.67	0.00e+00	1129.00
IUUC-Fca-036307	Felis catus	94.13	0.00e+00	3727.00
IUUC-Fal-037332	Ficedula albicollis	97.46	0.00e+00	3762.00
IUUC-Gmo-039057	Gadus morhua	74.73	0.00e+00	2999.00
IUUC-Gga-041095	Gallus gallus	74.86	0.00e+00	2202.00
IUUC-Gac-042555	Gasterosteus aculeatus	79.99	0.00e+00	3234.00
IUUC-Ggo-045107	Gorilla gorilla	93.92	0.00e+00	3726.00
IUUC-Hsa-046482	Homo sapiens	94.08	0.00e+00	3730.00
IUUC-Itr-049023	Ictidomys tridecemlineatus	92.01	0.00e+00	3594.00
IUUC-Lch-050306	Latimeria chalumnae	73.03	0.00e+00	2727.00
IUUC-Loc-052642	Lepisosteus oculatus	87.68	0.00e+00	3476.00
IUUC-Laf-053649	Loxodonta africana	91.84	0.00e+00	3609.00
IUUC-Mcc-055361	Macaca mulatta	93.65	0.00e+00	3261.00
IUUC-Meu-056618	Macropus eugenii	77.62	0.00e+00	1781.00
IUUC-Mga-059202	Meleagris gallopavo	96.39	0.00e+00	3660.00
IUUC-Mmr-060729	Microcebus murinus	91.82	0.00e+00	3695.00
IUUC-Mdo-062462	Monodelphis domestica	93.88	0.00e+00	3625.00
IUUC-Mmu-063865	Mus musculus	92.95	0.00e+00	3714.00
IUUC-Mpu-066724	Mustela putorius furo	94.33	0.00e+00	3735.00
IUUC-Mlu-067816	Myotis lucifugus	93.38	0.00e+00	3717.00
IUUC-Nle-069911	Nomascus leucogenys	74.43	0.00e+00	3049.00
IUUC-Opr-070213	Ochotona princeps	90.16	0.00e+00	1931.00
IUUC-Ont-071928	Oreochromis niloticus	79.59	0.00e+00	3217.00
IUUC-Oan-073563	Ornithorhynchus anatinus	93.74	0.00e+00	3711.00
IUUC-Ocu-074531	Oryctolagus cuniculus	93.82	0.00e+00	3720.00
IUUC-Ola-086943	Oryzias latipes	78.86	0.00e+00	3119.00
IUUC-Olu-087860	Ostreococcus lucimarinus	35.73	1.00e-116	413.00
IUUC-Oga-088665	Otolemur garnettii	92.80	0.00e+00	3572.00
IUUC-Oar-090429	Ovis aries	94.08	0.00e+00	3733.00
IUUC-Ptr-091168	Pan troglodytes	85.45	0.00e+00	3323.00
IUUC-Pan-092404	Papio anubis	74.50	0.00e+00	3048.00
IUUC-Psi-093281	Pelodiscus sinensis	93.39	0.00e+00	3692.00
IUUC-Pma-094424	Petromyzon marinus	71.01	2.00e-122	431.00
IUUC-Pfo-096073	Poecilia formosa	74.45	0.00e+00	3095.00
IUUC-Pab-098561	Pongo abelii	92.92	0.00e+00	3223.00
IUUC-Pca-100107	Procavia capensis	61.61	0.00e+00	1958.00
IUUC-Pva-102880	Pteropus vampyrus	71.44	0.00e+00	2786.00
IUUC-Rno-105002	Rattus norvegicus	92.24	0.00e+00	3684.00
IUUC-Sha-107105	Sarcophilus harrisii	91.05	0.00e+00	3493.00
IUUC-Sar-113401	Sorex araneus	65.18	0.00e+00	1405.00
IUUC-Ssc-116282	Sus scrofa	93.98	0.00e+00	3625.00
IUUC-Tru-118040	Takifugu rubripes	78.52	0.00e+00	3176.00
IUUC-Tsy-118941	Tarsius syrichta	64.44	0.00e+00	2219.00
IUUC-Tni-120118	Tetraodon nigroviridis	76.09	0.00e+00	3130.00
IUUC-Tbe-127467	Tupaia belangeri	68.18	0.00e+00	1429.00
IUUC-Ttr-129138	Tursiops truncatus	70.89	0.00e+00	2799.00
IUUC-Vpa-130083	Vicugna pacos	70.56	0.00e+00	2686.00
IUUC-Xtr-131835	Xenopus tropicalis	73.44	0.00e+00	3062.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence