iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pab-098307

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ABGA01116042

Gene Name

WDR83

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPPYG00000009599.2	ENSPPYT00000011185.2	ENSPPYP00000010763.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.60e-31	106.0	108	143
UBD/Beta-Prp	1.30e-48	165.7	26	183

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgv 34
           gH+++v+ ++f  + t ++sGs D +i++WD r+ +
   Q: 108  GHAGKVSTVQFnEEaTVILSGSIDSSIRCWDCRSRR 143
           8**********54489***************99866 PP

UBD/Beta-Prp

   S: 137  dgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnv 225
           +g+v+ v+++ dgn++ +++ D+t++lW+  +g+llrt +g h   v   + + +   l sg+ d+ v lwd+ +g++vr+++gh   v
   Q: 26   QGAVRAVRFNVDGNYCLTCGSDKTLKLWNPLRGTLLRTYSG-HGYEVLDAAGSFDNSNLCSGGGDKAVVLWDVASGQVVRKFRGHAGKV 113
           56777777777777777777777777777777777777777.77777777755555677777777777777777777777777777777 PP
   S: 226  ksvrfspnderlvsgssDgsiriWdlrsg..dllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkk 296
           + v+f ++ + ++sgs D sir+Wd+rs+  ++++tl   ++ v+sv+v   +d ++++gs d++v+ ++l++
   Q: 114  STVQFNEEATVILSGSIDSSIRCWDCRSRrpEPVQTLDEARDGVSSVKV---SDHEVLAGSVDGRVRRYDLRM 183
           7777777777777777777777777777722346677777777777777...777777777777777777765 PP

Organism

Pongo abelii

Protein Sequence
(Fasta)

MAFPEPKPRP PELPQKRLKT LDCAWQGAVR AVRFNVDGNY CLTCGSDKTL KLWNPLRGTL 60
LRTYSGHGYE VLDAAGSFDN SNLCSGGGDK AVVLWDVASG QVVRKFRGHA GKVSTVQFNE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTTCC CTGAGCCAAA GCCGCGGCCT CCGGAGCTGC CGCAGAAACG TTTGAAGACG 60
CTGGATTCTG CGCATGGCAG GGGGCGGTGC GAGCCGTACG ATTTAATGGT GAGCGCCTTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0005737--C:cytoplasm
GO:0000398--P:mRNA splicing, via spliceosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002160	Ailuropoda melanoleuca	95.87	1.00e-177	615.00
IUUC-Atr-002647	Amborella trichopoda	48.65	7.00e-88	316.00
IUUC-Aca-004948	Anolis carolinensis	79.37	3.00e-143	500.00
IUUC-Aly-006489	Arabidopsis lyrata	50.34	2.00e-80	291.00
IUUC-Ath-007099	Arabidopsis thaliana	50.00	5.00e-80	290.00
IUUC-Acl-008374	Aspergillus clavatus	37.21	4.00e-48	184.00
IUUC-Afl-008506	Aspergillus flavus	38.21	9.00e-50	190.00
IUUC-Afu-009098	Aspergillus fumigatus	33.73	8.00e-43	167.00
IUUC-Ang-009705	Aspergillus niger	34.41	4.00e-45	174.00
IUUC-Aor-010031	Aspergillus oryzae	38.21	9.00e-50	190.00
IUUC-Ame-011056	Astyanax mexicanus	72.12	1.00e-136	479.00
IUUC-Bgr-012109	Blumeria graminis	41.91	6.00e-55	207.00
IUUC-Bta-012476	Bos taurus	94.30	4.00e-176	610.00
IUUC-Bci-013860	Botrytis cinerea	35.69	3.00e-44	172.00
IUUC-Bdi-014565	Brachypodium distachyon	49.32	2.00e-85	308.00
IUUC-Bol-016204	Brassica oleracea	50.68	2.00e-80	291.00
IUUC-Bra-018093	Brassica rapa	50.68	4.00e-80	290.00
IUUC-Cel-018500	Caenorhabditis elegans	47.28	3.00e-82	298.00
IUUC-Cja-019279	Callithrix jacchus	97.47	5.00e-170	589.00
IUUC-Cfa-020516	Canis familiaris	95.57	7.00e-178	615.00
IUUC-Cpo-021427	Cavia porcellus	93.04	3.00e-165	574.00
IUUC-Cre-022775	Chlamydomonas reinhardtii	45.67	1.00e-72	266.00
IUUC-Csa-023449	Chlorocebus sabaeus	97.47	1.00e-169	588.00
IUUC-Cin-025637	Ciona intestinalis	56.71	1.00e-104	372.00
IUUC-Cgl-026458	Colletotrichum gloeosporioides	38.41	4.00e-50	191.00
IUUC-Cne-026994	Cryptococcus neoformans	35.39	3.00e-48	185.00
IUUC-Dre-028239	Danio rerio	73.02	4.00e-130	457.00
IUUC-Dno-029408	Dasypus novemcinctus	93.67	4.00e-175	606.00
IUUC-Dor-030684	Dipodomys ordii	95.12	4.00e-113	400.00
IUUC-Dse-031344	Dothistroma septosporum	45.28	4.00e-53	201.00
IUUC-Dme-031634	Drosophila melanogaster	47.40	2.00e-75	275.00
IUUC-Ete-033126	Echinops telfairi	85.44	2.00e-156	545.00
IUUC-Eca-034356	Equus caballus	87.66	2.00e-154	538.00
IUUC-Eeu-035196	Erinaceus europaeus	92.35	5.00e-77	280.00
IUUC-Fca-036231	Felis catus	94.62	3.00e-176	610.00
IUUC-Fox-038076	Fusarium oxysporum	37.54	2.00e-52	199.00
IUUC-Fso-038093	Fusarium solani	36.43	9.00e-45	174.00
IUUC-Gmo-039056	Gadus morhua	71.79	5.00e-130	456.00
IUUC-Ggr-039981	Gaeumannomyces graminis	33.94	3.00e-42	165.00
IUUC-Gga-041042	Gallus gallus	76.60	5.00e-146	509.00
IUUC-Gac-042638	Gasterosteus aculeatus	72.96	1.00e-133	468.00
IUUC-Gma-042689	Glycine max	49.83	1.00e-87	316.00
IUUC-Ggo-044720	Gorilla gorilla	98.10	5.00e-171	593.00
IUUC-Hsa-046056	Homo sapiens	98.10	2.00e-171	594.00
IUUC-Hvu-047675	Hordeum vulgare	46.15	8.00e-83	300.00
IUUC-Itr-048733	Ictidomys tridecemlineatus	93.77	6.00e-170	589.00
IUUC-Lch-050634	Latimeria chalumnae	78.03	2.00e-130	458.00
IUUC-Lpe-051470	Leersia perrieri	48.64	7.00e-85	306.00
IUUC-Loc-052452	Lepisosteus oculatus	77.30	6.00e-133	466.00
IUUC-Lma-053235	Leptosphaeria maculans	40.85	8.00e-27	114.00
IUUC-Laf-054315	Loxodonta africana	94.62	7.00e-167	579.00
IUUC-Mcc-054923	Macaca mulatta	97.47	7.00e-170	589.00
IUUC-Mor-056936	Magnaporthe oryzae	37.68	6.00e-45	174.00
IUUC-Mtr-058595	Medicago truncatula	51.58	1.00e-87	315.00
IUUC-Mla-058902	Melampsora laricipopulina	39.50	9.00e-60	223.00
IUUC-Mvi-060471	Microbotryum violaceum	42.09	1.00e-70	259.00
IUUC-Mmr-061665	Microcebus murinus	95.89	2.00e-178	617.00
IUUC-Mdo-062750	Monodelphis domestica	81.69	8.00e-133	466.00
IUUC-Mmu-063750	Mus musculus	92.72	2.00e-175	607.00
IUUC-Mac-065441	Musa acuminata	50.17	2.00e-87	315.00
IUUC-Mpu-066863	Mustela putorius furo	94.62	3.00e-176	610.00
IUUC-Mlu-067645	Myotis lucifugus	93.99	8.00e-175	605.00
IUUC-Nfi-068549	Neosartorya fischeri	36.57	4.00e-47	182.00
IUUC-Ncr-068816	Neurospora crassa	34.80	4.00e-40	158.00
IUUC-Nle-069457	Nomascus leucogenys	98.42	1.00e-171	595.00
IUUC-Opr-070874	Ochotona princeps	94.52	2.00e-77	282.00
IUUC-Ont-071674	Oreochromis niloticus	72.84	1.00e-119	422.00
IUUC-Oan-073391	Ornithorhynchus anatinus	79.11	5.00e-150	523.00
IUUC-Ocu-074186	Oryctolagus cuniculus	92.72	3.00e-168	583.00
IUUC-Oba-075414	Oryza barthii	50.18	1.00e-83	303.00
IUUC-Obr-076739	Oryza brachyantha	48.30	1.00e-83	302.00
IUUC-Ogl-076962	Oryza glaberrima	48.64	2.00e-84	305.00
IUUC-Ogu-078831	Oryza glumaepatula	48.64	1.00e-84	305.00
IUUC-Oin-079985	Oryza indica	48.30	2.00e-84	305.00
IUUC-Ome-081333	Oryza meridionalis	48.34	1.00e-76	279.00
IUUC-Oni-082558	Oryza nivara	48.30	2.00e-84	305.00
IUUC-Opu-084091	Oryza punctata	48.98	1.00e-85	309.00
IUUC-Oru-085253	Oryza rufipogon	48.71	4.00e-80	290.00
IUUC-Osa-086077	Oryza sativa	48.30	2.00e-84	305.00
IUUC-Ola-086946	Oryzias latipes	72.06	1.00e-134	471.00
IUUC-Olu-087604	Ostreococcus lucimarinus	40.32	9.00e-55	206.00
IUUC-Oga-088681	Otolemur garnettii	93.29	2.00e-172	597.00
IUUC-Oar-089913	Ovis aries	93.35	3.00e-173	600.00
IUUC-Ptr-091343	Pan troglodytes	98.10	2.00e-169	587.00
IUUC-Pan-092078	Papio anubis	97.47	1.00e-169	588.00
IUUC-Psi-093190	Pelodiscus sinensis	79.55	1.00e-149	521.00
IUUC-Pno-095078	Phaeosphaeria nodorum	38.63	7.00e-52	197.00
IUUC-Ppa-095777	Physcomitrella patens	49.32	4.00e-87	314.00
IUUC-Pfo-097153	Poecilia formosa	74.34	5.00e-127	447.00
IUUC-Pop-099315	Populus trichocarpa	51.01	9.00e-82	296.00
IUUC-Pca-100538	Procavia capensis	93.68	2.00e-148	518.00
IUUC-Ppe-101632	Prunus persica	48.31	4.00e-87	314.00
IUUC-Pva-102484	Pteropus vampyrus	95.89	1.00e-178	618.00
IUUC-Pgr-103495	Puccinia graminis	38.65	3.00e-62	231.00
IUUC-Ptt-103975	Puccinia triticina	38.30	9.00e-61	226.00
IUUC-Pte-104354	Pyrenophora teres	36.82	2.00e-41	162.00
IUUC-Pyt-104692	Pyrenophora triticirepentis	37.55	3.00e-41	162.00
IUUC-Rno-105655	Rattus norvegicus	91.77	2.00e-173	600.00
IUUC-Sha-107130	Sarcophilus harrisii	83.12	1.00e-111	395.00
IUUC-Sja-107933	Schizosaccharomyces japonicus	38.54	5.00e-57	214.00
IUUC-Spo-108131	Schizosaccharomyces pombe	40.15	1.00e-56	213.00
IUUC-Ssl-108405	Sclerotinia sclerotiorum	35.69	1.00e-44	173.00
IUUC-Smo-109004	Selaginella moellendorffii	47.96	2.00e-78	285.00
IUUC-Sit-110508	Setaria italica	49.32	2.00e-85	308.00
IUUC-Sly-111093	Solanum lycopersicum	48.47	1.00e-78	285.00
IUUC-Stu-112380	Solanum tuberosum	48.47	2.00e-78	285.00
IUUC-Sar-113127	Sorex araneus	89.66	9.00e-73	266.00
IUUC-Sbi-114461	Sorghum bicolor	48.30	5.00e-84	303.00
IUUC-Sre-115020	Sporisorium reilianum	38.36	7.00e-41	162.00
IUUC-Ssc-115632	Sus scrofa	95.51	6.00e-176	609.00
IUUC-Tru-118039	Takifugu rubripes	70.68	2.00e-125	441.00
IUUC-Tsy-119239	Tarsius syrichta	97.65	3.00e-94	337.00
IUUC-Tni-120097	Tetraodon nigroviridis	68.44	2.00e-122	431.00
IUUC-Tca-121695	Theobroma cacao	51.53	2.00e-90	325.00
IUUC-Tre-122182	Trichoderma reesei	37.25	9.00e-48	184.00
IUUC-Tvi-122429	Trichoderma virens	37.50	5.00e-51	194.00
IUUC-Tae-125136	Triticum aestivum	50.00	4.00e-87	314.00
IUUC-Tur-126216	Triticum urartu	50.00	1.00e-87	316.00
IUUC-Tme-127030	Tuber melanosporum	43.38	2.00e-61	228.00
IUUC-Tbe-127686	Tupaia belangeri	92.63	2.00e-100	358.00
IUUC-Ttr-128770	Tursiops truncatus	93.67	2.00e-175	608.00
IUUC-Uma-129446	Ustilago maydis	34.73	1.00e-37	151.00
IUUC-Vda-129680	Verticillium dahliae	39.18	2.00e-40	159.00
IUUC-Vvi-131292	Vitis vinifera	51.02	6.00e-89	320.00
IUUC-Xtr-132204	Xenopus tropicalis	74.92	7.00e-143	499.00
IUUC-Xma-133727	Xiphophorus maculatus	73.16	2.00e-127	448.00
IUUC-Zma-135908	Zea mays	48.30	9.00e-79	286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence