iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-044205

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000846

Gene Name

LOC100819341; GLYMA_13G162300

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA13G23120	GLYMA13G23120.1	GLYMA13G23120.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.50e-80	271.8	202	580

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrellle..kkkeklneenp..................kepkgellkslqklfeelwkskkkavsprellk 75
           Gl+NlgNtC+mNSvLQ+L+++p+lr+++l+  +++  ++++n+                  k+   +l++ +   f+++ ++++  +sp ++l 
   Q: 202  GLNNLGNTCFMNSVLQALLHTPPLRNYFLSdrHNRFFCQKKNNgdvdvdaavkrsggnngnKNARICLACDMDATFSAVFSGDRAPYSPAKFLY 295
           9*****************************742222344444477777777777777776677777**************************** PP
   S: 76   alkkeaeefsgyeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepf 169
           + ++ a ++ +yeqqDa+Ef+  +ld+++e+++k                  + ++  + +   ++ +++F g l+s+++c +c+ +s++++p 
   Q: 296  SWWQHAANLATYEQQDAHEFFISMLDGIHEKVEK-----------------GRRKPHTEGNGDCCIAHKVFSGILRSDVTCMACGFTSTTYDPC 372
           ********************************44.................2224556678888****************************** PP
   S: 170  ldlslpvpgkeetkke..........................slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRf 237
           +d+sl+++ ++  +++                          +l  cL+ ft++e+l +++k++c++c+ +qe+ k+++++klP v ++h+kRf
   Q: 373  IDISLDLEPNQWGSTKmatatsnhscngeadcmnssqicgtsTLMGCLKRFTRAERLGSDQKIFCRQCQVRQETLKQMSIRKLPLVSCFHIKRF 466
           ***********9988899**************************************************************************** PP
   S: 238  sfseeqksrekinkkvefpleLdlspfcts...................peekqke....kkkYeLiavvvHsGslssGHYvayvknekgkWll 308
           + s+++k+++k++++++fp +Ld+sp+++s                   +          + ++eL+avv HsG+l+ GHYv+y +  +++W++
   Q: 467  EHSSTRKMPRKVDRYLQFPFSLDMSPYLSStilrnrfgnrifpfdgdelD-----AsdelCSEFELFAVVTHSGKLDAGHYVTYLRL-SNRWYK 554
           ******************************77777777777777666542.....04444***************************.899*** PP
   S: 309  fdDskVtevkeeevleetgstaYvlfYkr 337
           +dD  Vt+v+e+ v     ++ Y++fY +
   Q: 555  CDDAWVTQVDENIVRA---AQCYMMFYVQ 580
           ****************...********76 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MSSKINGQIS PLPCPHLAEF HRTSAKPFLA LHNCLRIKPP GGRASLRRNP DEVPRCCACG 60
LSAPSRLYAC VTCAAVSCHS SAAGVLSHAA AHAASMPPGH QIAVDVDRAE LFCCACRDQV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGTAATGATT TTAATATATT TTTATTGTTT TCTACAAATA TAGAAAGCAG AGTATAAAAT 60
AAAGCAGTGA AGCAATGAGA ATGAGAGAAG GAGGCAGAAA GGAGTGAGCA GAAGCTGAAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100819341

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024863	Choloepus hoffmanni	29.36	2.00e-27	117.00
IUUC-Cme-027115	Cyanidioschyzon merolae	28.24	1.00e-24	109.00
IUUC-Mac-065419	Musa acuminata	54.46	5.00e-156	544.00
IUUC-Nle-069084	Nomascus leucogenys	37.24	7.00e-81	294.00
IUUC-Olu-087695	Ostreococcus lucimarinus	34.84	5.00e-56	211.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence