iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

UUCD2 ID

IUUC-Ath-007172

UUCD1 version

UUC-ArT-00499

Ensembl Protein ID

AT2G45920.1

UniProt Accession

Q683D5; O80827; PUB37_ARATH

Genbank Protein ID

AAC28533.1; AEC10617.1; BAD42945.1; AAU90054.1; AAV43783.1

Protein Name

U-box domain-containing protein 37; Plant U-box protein 37; RING-type E3 ubiquitin transferase PUB37

Genbank Nucleotide ID

AC004665; CP002685; AK175182; BT015764; BT020181

Gene Name

PUB37; At2g45920; F4I18.10

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT2G45920	AT2G45920.1	AT2G45920.1
AT2G45920	AT2G45920.2	AT2G45920.2

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
iRefIndex	PINA	HINT
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.10e-27	96.7	325	396

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 2    vpeeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrliqawceens 73
            p++f+CpIsle+M+dP  +++G ty++++I  wl+ g++t+P+t+++l++++lvPnl+lr+ iq+w++++s
   Q: 325  APQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLALRSAIQEWLHASS 396
           79******************************************************************9876 PP

Organism

Arabidopsis thaliana

Functional Description
(View)

Functions as an E3 ubiquitin ligase.

Protein Sequence
(Fasta)

MMGKSGSQQL LMDEKIYVAV GSDLGNKSTL VWAIQNTGGK EFCIVHVHQP LYRKEKEKTQ 60
KILDKYLQKC RQMQVCAEMI HIKMESVEKG IIQLISERNV KKLVMGAASD TRYSMRMADL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTTAGCTAA AATTAGGATG AGTCTTACAT TTTTAGTCAA GACTATCGTG TAAGACTTGT 60
TTTCCACCTG GAAGAAGTTA CCTTGGATTG CCTATAGTGA TTTTTAATGA ACTCTTAAAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0808--Transferase
KW-0833--Ubl conjugation pathway

Interpro

IPR014729--Rossmann-like_a/b/a_fold
IPR003613--Ubox_domain
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51698--U_BOX

Pfam

PF04564--U-box

SMART

SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity

KEGG

ath:AT2G45920

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006216	Arabidopsis lyrata	91.81	0.00e+00	715.00
IUUC-Ola-087527	Oryzias latipes	54.79	2.00e-16	79.00
IUUC-Pan-091769	Papio anubis	34.71	9.00e-17	80.10
IUUC-Pab-098139	Pongo abelii	34.91	4.00e-18	85.10
IUUC-Sbi-113827	Sorghum bicolor	29.27	9.00e-37	147.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence