iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d043998	Zm00001d043998_T001	Zm00001d043998_T001
Zm00001d043998	Zm00001d043998_T003	Zm00001d043998_T003
Zm00001d043998	Zm00001d043998_T005	Zm00001d043998_T005
Zm00001d043998	Zm00001d043998_T004	Zm00001d043998_T004

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	8.20e-56	189.6	5	139
UBD/UBC-like/UBD_UBC	1.20e-75	254.2	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeee 90
           R++kelk+l+kdpp+++sa+pv e d+++w+++i+Gp+d+pY ggvF ++i+fp+dYPfkPPkv f tk+fhPn+++nG++Cl+ilk  +
   Q: 5    RIQKELKDLQKDPPTSCSAGPVGE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILK--D 91
           9***********************.9************************************************************9..* PP
   S: 91   kWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           +Wspal++++vllsi+sll++pnp++pl  e+a+++k++r++y++++r
   Q: 92   QWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRHKYENTAR 139
           ********************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqws 90
           ri+kelkdl++d+++ +sa++v++d+f+++ati+gp+dspy ggvf +ti++p dypfkppkvaf tk++hpninsngsicldil++qws
   Q: 5    RIQKELKDLQKDPPTSCSAGPVGEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKDQWS 94
           8***************************************************************************************** PP
   S: 91   aaltlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           +alt+skvlls+csll+d++pddplv+eia++yktd++ky+++ar wt
   Q: 95   PALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRHKYENTARTWT 142
           ***********************************************8 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MASKRIQKEL KDLQKDPPTS CSAGPVGEDM FHWQATIMGP SDSPYSGGVF LVTIHFPPDY 60
PFKPPKVAFR TKVFHPNINS NGSICLDILK DQWSPALTIS KVLLSICSLL TDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAAAGAAGC GCTGGTTCGA TGAAGCTGCA TAAATAAAGC CAGCACGCAA ACCAGCAGCG 60
TTCAGAGGAA ACCCATTTAC GTATATGCCC TTGTCCCGGT TCCTTTCCCC ATCCCCAACT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014561	Brachypodium distachyon	97.90	1.00e-82	297.00
IUUC-Gac-042231	Gasterosteus aculeatus	79.86	5.00e-68	249.00
IUUC-Lpe-051481	Leersia perrieri	99.30	4.00e-83	299.00
IUUC-Ogl-076968	Oryza glaberrima	99.30	3.00e-83	299.00
IUUC-Ogu-078091	Oryza glumaepatula	99.30	3.00e-84	305.00
IUUC-Oin-079659	Oryza indica	99.30	3.00e-83	299.00
IUUC-Olo-080866	Oryza longistaminata	99.31	4.00e-84	304.00
IUUC-Oni-082391	Oryza nivara	99.30	6.00e-84	303.00
IUUC-Oru-085167	Oryza rufipogon	99.30	7.00e-84	303.00
IUUC-Osa-086003	Oryza sativa	99.30	3.00e-83	299.00
IUUC-Pma-094405	Petromyzon marinus	77.37	7.00e-63	231.00
IUUC-Sit-109973	Setaria italica	99.30	9.00e-83	298.00
IUUC-Sbi-114840	Sorghum bicolor	100.00	1.00e-83	300.00
IUUC-Sre-115037	Sporisorium reilianum	77.40	6.00e-69	251.00
IUUC-Tae-123340	Triticum aestivum	98.60	3.00e-82	295.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence