iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017194

Ensembl Protein ID

Bra033630.1-P

UniProt Accession

M4EXU1; M4EXU1_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra033630	Bra033630.1	Bra033630.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-38	130.2	184	220
UBD/Beta-Prp	2.70e-77	260.9	137	456

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           H+++v++++f ++ +l+vsG+dD +ikvW+ +t+++l
   Q: 184  HEGPVRGVHFhNSqPLFVSGGDDYKIKVWNHKTHRCL 220
           9*********9777****************9999997 PP

UBD/Beta-Prp

   S: 4    tlkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvls 99
           t +++++++++ ++f+p++++++++  +g i++wd+++g+l+ ++ +he++v+ v f+++++++v+g++D+ ikvw+ +t  c+ tl gh d++++
   Q: 137  TKFETKSNRVKGLTFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNHKTHRCLFTLLGHLDYIRT 232
           67889999**************************************************************************************** PP
   S: 100  lsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdl......................ktgkllr 173
           ++f+ ++ ++vs+s+d+tir+w++++++c++ +l+gh++ v+c+++hp+++l+vs+slD+tvr+Wd+                             
   Q: 233  VQFHHENPWIVSASDDQTIRIWNWQSRTCIS-VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIaslkkktvspaddlmrftqmnsD------ 321
           *******************************.*******************************************999999955555550...... PP
   S: 174  tl...........tgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdl 256
            l            +gh++ v++ sf+++ + +vsg++d++vklw + +++   v+tl+gh +nv+sv f+ +++++vs s+D+sir+Wd ++++ 
   Q: 322  -LfggvdaivkyvLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAweVDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTG 416
           .455555555556555********************************887778****************************************** PP
   S: 257  lktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkkne 298
           ++t+ +++++++  av +++ n l++g + +   ++kl++++
   Q: 417  IQTFRREHDRFWVLAV-HPEINLLAAGHD-NGMIVFKLERER 456
           ****************.888777777755.566677887766 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MASNRPMSPR LEQIHGEIRD HFRALAYGMV SKSWIRSRIQ LDKASSGEPA AEENVQMASS 60
MSNQEFVDAG MKRMDETDQA IERSKQVSYR KVVEQTLEVG TQTAANLKGQ VWFSLKRLFS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTTCGA ATCGCCCGAT GAGCCCTCGA TTAGAGCAGA TCCATGGTGA AATCCGTGAC 60
CATTTTCGAG CCCTCGCGTA TGGTTTCATT CTCTCTCTAT ATTGGTTACA GAGAGCACTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR024977--Apc4_WD40_dom
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011048--Haem_d1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12894--ANAPC4_WD40
PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aca-005154	Anolis carolinensis	76.96	3.00e-94	337.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence