iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-098945

Ensembl Protein ID

POPTR_0008s17270.1

UniProt Accession

B9HKV8; B9HKV8_POPTR

Genbank Protein ID

EEE89976.2

Protein Name

Transducin family protein

Genbank Nucleotide ID

CM000344

Gene Name

POPTRDRAFT_565006; POPTR_0008s17270g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0008s17270	POPTR_0008s17270.1	POPTR_0008s17270.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-26	92.0	344	380
UBD/Beta-Prp	2.40e-43	149.6	291	507

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           gH+  v++++f +d t ++++s+D++ik WD+ tg +
   Q: 344  GHSKAVRDISFcNDgTKFLTASYDKNIKYWDTETGQV 380
           8***********999*****************99976 PP

UBD/Beta-Prp

   S: 41   tgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdl.stgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcl 129
           ++ l+++ sgh+++v+a++f p++  ++++++ D  +k+wd+ ++gkc++t+ gh++ v+++sf+ +g k++++s d+ i+ wd+etgq++
   Q: 291  PKRLVHTWSGHTKGVSAIRFFPKYGhLILSAGMDTKVKIWDVfNSGKCMRTYMGHSKAVRDISFCNDGTKFLTASYDKNIKYWDTETGQVI 381
           6778999999999999999999987799999999999999762689999999999999999999999999999999999999999999999 PP
   S: 130  eetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtln 219
           +++ +g+   v  ++ ++d+ n+l +G+ D+++  Wd+++g++ ++  + h ++v+ ++f +n +++v+ s+d+++++w++    +++   
   Q: 382  STFSTGKIPYVVKLNPDDDKqNILLAGMSDKKIVQWDMNSGQITQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYIS 471
           9888888888888888888889999999999999999999999999987.99999999999999999999999999999999777666555 PP
   S: 220  g.htdnvksvrfspnderlvsgssDgsiriWdlrsg 254
           + h   +  + ++pn+++l+  s D++i i+ +r +
   Q: 472  EpHMHSMPAISLHPNSNWLAAQSLDNQILIYSTRER 507
           559999999999999999999999999999976655 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MNKVTHPSPS PTMDLLQNYH NDDELDEHGQ NPNSSPDSSS PPRLLPSKSA APKVDDTMLA 60
LTVANQTLSK PIDPVQHAVA FNPTYDQLWA PVLGPAHPYA KDGIAQGMRN HKLGFVENAA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTAGAGTAC ATATTTTATG AACAAGGTAA CGCACCCCTC TCCATCCCCA ACGATGGATC 60
TTCTCCAAAA CTACCATAAC GACGACGAAT TAGACGAACA TGGCCAAAAC CCTAATTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR002469--Peptidase_S9B_N
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

pop:POPTR_0008s17270g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002243	Ailuropoda melanoleuca	47.13	2.00e-99	355.00
IUUC-Apl-003885	Anas platyrhynchos	50.65	4.00e-154	537.00
IUUC-Ago-007726	Ashbya gossypii	39.83	1.00e-72	266.00
IUUC-Acl-008220	Aspergillus clavatus	40.55	4.00e-119	421.00
IUUC-Afl-008473	Aspergillus flavus	41.67	2.00e-117	415.00
IUUC-Afu-008773	Aspergillus fumigatus	41.70	9.00e-121	426.00
IUUC-Ang-009851	Aspergillus niger	40.67	2.00e-116	412.00
IUUC-Aor-009950	Aspergillus oryzae	41.67	2.00e-117	415.00
IUUC-Ate-010372	Aspergillus terreus	41.62	5.00e-121	427.00
IUUC-Bta-012568	Bos taurus	51.32	8.00e-156	543.00
IUUC-Bci-013646	Botrytis cinerea	53.61	4.00e-110	391.00
IUUC-Cja-019071	Callithrix jacchus	51.32	2.00e-155	541.00
IUUC-Cfa-020559	Canis familiaris	51.32	2.00e-155	542.00
IUUC-Cpo-022356	Cavia porcellus	51.13	4.00e-155	540.00
IUUC-Csa-023125	Chlorocebus sabaeus	51.32	1.00e-155	542.00
IUUC-Cgl-026739	Colletotrichum gloeosporioides	46.67	5.00e-96	344.00
IUUC-Dre-027631	Danio rerio	50.66	6.00e-159	553.00
IUUC-Dse-031520	Dothistroma septosporum	47.70	4.00e-98	351.00
IUUC-Dme-032050	Drosophila melanogaster	46.07	8.00e-148	516.00
IUUC-Ete-032866	Echinops telfairi	50.00	1.00e-149	522.00
IUUC-Eca-033384	Equus caballus	51.13	5.00e-154	537.00
IUUC-Fca-035727	Felis catus	51.32	5.00e-156	543.00
IUUC-Fox-037951	Fusarium oxysporum	50.28	2.00e-108	385.00
IUUC-Fso-038287	Fusarium solani	52.35	1.00e-106	380.00
IUUC-Gmo-039670	Gadus morhua	51.03	1.00e-158	552.00
IUUC-Gga-040293	Gallus gallus	51.12	4.00e-157	547.00
IUUC-Gac-042159	Gasterosteus aculeatus	50.47	1.00e-156	546.00
IUUC-Ggo-044864	Gorilla gorilla	51.32	1.00e-155	542.00
IUUC-Hsa-046602	Homo sapiens	51.32	1.00e-155	542.00
IUUC-Itr-047985	Ictidomys tridecemlineatus	60.92	5.00e-137	480.00
IUUC-Kpa-049318	Komagataella pastoris	47.06	3.00e-91	328.00
IUUC-Lch-049796	Latimeria chalumnae	43.15	1.00e-124	439.00
IUUC-Lma-053107	Leptosphaeria maculans	50.58	1.00e-106	379.00
IUUC-Laf-053787	Loxodonta africana	51.31	2.00e-156	545.00
IUUC-Mcc-055706	Macaca mulatta	51.32	1.00e-155	542.00
IUUC-Meu-056757	Macropus eugenii	59.70	3.00e-116	412.00
IUUC-Mor-057079	Magnaporthe oryzae	49.13	6.00e-104	370.00
IUUC-Mga-059366	Meleagris gallopavo	51.12	6.00e-157	546.00
IUUC-Mmr-061209	Microcebus murinus	51.50	1.00e-157	548.00
IUUC-Mmu-063173	Mus musculus	51.32	1.00e-155	543.00
IUUC-Mpu-066659	Mustela putorius furo	51.32	4.00e-156	543.00
IUUC-Mlu-067029	Myotis lucifugus	51.41	1.00e-155	542.00
IUUC-Nfi-068334	Neosartorya fischeri	42.24	9.00e-122	430.00
IUUC-Ncr-068675	Neurospora crassa	47.25	2.00e-92	332.00
IUUC-Nle-070113	Nomascus leucogenys	51.32	1.00e-155	542.00
IUUC-Oan-073573	Ornithorhynchus anatinus	50.40	7.00e-143	499.00
IUUC-Ocu-074074	Oryctolagus cuniculus	51.32	2.00e-157	548.00
IUUC-Oin-079898	Oryza indica	82.34	0.00e+00	692.00
IUUC-Olu-087627	Ostreococcus lucimarinus	49.33	3.00e-143	501.00
IUUC-Oga-088359	Otolemur garnettii	51.32	9.00e-156	543.00
IUUC-Oar-089390	Ovis aries	51.32	1.00e-155	542.00
IUUC-Ptr-090894	Pan troglodytes	51.32	1.00e-155	542.00
IUUC-Pan-092476	Papio anubis	51.32	1.00e-155	542.00
IUUC-Psi-093527	Pelodiscus sinensis	50.00	1.00e-142	499.00
IUUC-Pno-094771	Phaeosphaeria nodorum	49.13	7.00e-105	373.00
IUUC-Pab-097838	Pongo abelii	50.42	2.00e-132	465.00
IUUC-Pva-102418	Pteropus vampyrus	51.32	9.00e-156	543.00
IUUC-Pte-104386	Pyrenophora teres	48.21	2.00e-104	371.00
IUUC-Pyt-104560	Pyrenophora triticirepentis	48.33	5.00e-104	370.00
IUUC-Rno-105694	Rattus norvegicus	50.00	3.00e-147	514.00
IUUC-Sce-106339	Saccharomyces cerevisiae	36.96	2.00e-74	272.00
IUUC-Sha-106709	Sarcophilus harrisii	51.12	1.00e-156	545.00
IUUC-Sja-107817	Schizosaccharomyces japonicus	37.66	2.00e-109	389.00
IUUC-Sar-113065	Sorex araneus	37.70	4.00e-36	145.00
IUUC-Ssc-115760	Sus scrofa	51.32	6.00e-156	543.00
IUUC-Tsy-119332	Tarsius syrichta	51.50	1.00e-157	549.00
IUUC-Tre-122162	Trichoderma reesei	52.78	2.00e-111	395.00
IUUC-Tvi-122500	Trichoderma virens	52.50	5.00e-111	394.00
IUUC-Tbe-127968	Tupaia belangeri	47.04	4.00e-142	497.00
IUUC-Ttr-129215	Tursiops truncatus	51.13	1.00e-153	536.00
IUUC-Vda-129750	Verticillium dahliae	51.52	7.00e-110	390.00
IUUC-Vpa-130617	Vicugna pacos	50.94	3.00e-149	521.00
IUUC-Yli-134390	Yarrowia lipolytica	50.72	4.00e-105	374.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence