iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Fal-036925

Ensembl Protein ID

ENSFALP00000003987.1

UniProt Accession

U3JMI3; U3JMI3_FICAL

Genbank Protein ID

ENSFALP00000003987

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGTO01001674

Gene Name

USP40

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSFALG00000003826.1	ENSFALT00000004005.1	ENSFALP00000003987.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	1.60e-77	260.6	42	491

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkg....ellkslqklfeelwkskkkavsprellkalkkeaeefsg 86
           G+kN+g tCY+NS+LQ+L+++pe+re+l++  +e+l   +++ +       +  +lq+lf++l+  +++a s+++l++++++ ++e  +
   Q: 42   GIKNQGGTCYLNSLLQTLLFTPEFREALFSLGPEELGTLDDSRKPDakvrIIPLQLQRLFAQLLLLDQQAASTTDLTESFGWSSQE--E 128
           9*****************************888887766542222234448899****************************9998..* PP
   S: 87   yeqqDaqEflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslp 175
           ++q+D+qE+ ++l+++le++l                            +++++li++l++g + +qi+c+ec+nvs+r+e+fldl+++
   Q: 129  MRQHDVQELNRILFSALETSL--------------------------VGTSGHDLINRLYHGIVVNQIVCKECKNVSERQEDFLDLTVA 191
           *********************..........................789*************************************** PP
   S: 176  vpgkeetkkeslqdcL.esftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlsp 263
           v+g        l+++L +++++ee +e++n y c  c+k++ea+k+ kl+klP++L++ L Rf+f+ e++ r k +++++fp +++l+p
   Q: 192  VKGMA-----GLEEALwNMYVEEEYFENDNLYRCGACDKLVEASKSAKLRKLPPFLTISLLRFNFDFEKCERYKETSCYTFPTQINLRP 275
           *****.....9****************************************************************************** PP
   S: 264  fctspeekqkekkkYeLiavvvHsGslssGHYvayvkn................................................... 301
           fc+++e ++ +++ YeL++v++H+G++ +GHY++y+++                                                   
   Q: 276  FCEQTEMDD-SEYMYELFSVIIHKGGCYGGHYHVYIRDvdelgnwqlqeeedglieekvlrdtenaketenplavlkgilseeeakqia 363
           ****77766.5****************************************************************************** PP
   S: 302  ......................................................................................... 301
                                                                                                    
   Q: 364  vdqlgqkllekkgvswnkkyrkqygalrkylqnhpqifqlspdgnkvslkethkllfkldshgqnlqspsqkndvqwncektpprpmas 452
           ****************************************************************9999999999999998888888776 PP
   S: 302  .ekgk.WllfdDskVtevkeeevleetg..staYvlfYkr 337
               + W+ ++D kV+++ke++++++ +  ++aY+lfY++
   Q: 453  sAG-ChWFDLNDCKVQPIKEKDIEKQFQgkESAYMLFYRK 491
           334.36*******************9889*********97 PP

Organism

Ficedula albicollis

Protein Sequence
(Fasta)

MFGDLFEEDF SFISNNHCGK GKKSKPRESE PPAPRDFTNL SGIKNQGGTC YLNSLLQTLL 60
FTPEFREALF SLGPEELGTL DDSRKPDAKV RIIPLQLQRL FAQLLLLDQQ AASTTDLTES 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAAGAAGC CCCAGGCGCT TGGAGGAGGT GGATAAGGAT AATCCAAGGT AGGGGGCAGT 60
TCTCACTTGT AGGAATAAAT GACAGCTTTA TGCAAAATGG AATTGTGGTG GGTCTGATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001216	Ailuropoda melanoleuca	63.03	0.00e+00	1422.00
IUUC-Apl-004105	Anas platyrhynchos	87.03	0.00e+00	2087.00
IUUC-Aca-004715	Anolis carolinensis	69.02	0.00e+00	1609.00
IUUC-Ame-011073	Astyanax mexicanus	48.20	0.00e+00	1017.00
IUUC-Bta-012487	Bos taurus	62.46	0.00e+00	1397.00
IUUC-Cja-018937	Callithrix jacchus	64.11	0.00e+00	1467.00
IUUC-Cfa-020645	Canis familiaris	56.16	0.00e+00	858.00
IUUC-Cpo-022160	Cavia porcellus	61.50	0.00e+00	1392.00
IUUC-Csa-023078	Chlorocebus sabaeus	64.84	0.00e+00	1488.00
IUUC-Cho-025013	Choloepus hoffmanni	50.24	7.00e-166	577.00
IUUC-Csv-026193	Ciona savignyi	56.60	3.00e-60	224.00
IUUC-Dre-027416	Danio rerio	50.82	0.00e+00	1139.00
IUUC-Dno-029639	Dasypus novemcinctus	59.92	0.00e+00	1158.00
IUUC-Dor-030624	Dipodomys ordii	77.56	2.00e-130	459.00
IUUC-Ete-032626	Echinops telfairi	51.52	9.00e-170	590.00
IUUC-Eca-034208	Equus caballus	64.65	0.00e+00	1482.00
IUUC-Eeu-035340	Erinaceus europaeus	35.20	1.00e-51	198.00
IUUC-Fca-036006	Felis catus	76.83	2.00e-171	594.00
IUUC-Gmo-038597	Gadus morhua	46.34	0.00e+00	923.00
IUUC-Gga-041171	Gallus gallus	85.57	0.00e+00	2010.00
IUUC-Gac-041362	Gasterosteus aculeatus	46.48	0.00e+00	987.00
IUUC-Ggo-045069	Gorilla gorilla	62.34	0.00e+00	1319.00
IUUC-Hsa-046715	Homo sapiens	64.05	0.00e+00	1472.00
IUUC-Itr-049006	Ictidomys tridecemlineatus	62.93	0.00e+00	1404.00
IUUC-Lch-050182	Latimeria chalumnae	54.06	0.00e+00	1127.00
IUUC-Loc-052705	Lepisosteus oculatus	55.56	0.00e+00	1266.00
IUUC-Laf-054132	Loxodonta africana	63.93	0.00e+00	1463.00
IUUC-Mcc-055734	Macaca mulatta	64.47	0.00e+00	1479.00
IUUC-Meu-056135	Macropus eugenii	83.26	1.00e-111	397.00
IUUC-Mga-060092	Meleagris gallopavo	84.17	0.00e+00	1963.00
IUUC-Mmr-061546	Microcebus murinus	59.85	0.00e+00	1329.00
IUUC-Mdo-061935	Monodelphis domestica	59.35	0.00e+00	1370.00
IUUC-Mmu-063630	Mus musculus	61.98	0.00e+00	1422.00
IUUC-Mpu-066579	Mustela putorius furo	61.62	0.00e+00	1445.00
IUUC-Mlu-068034	Myotis lucifugus	63.42	0.00e+00	1400.00
IUUC-Nle-069082	Nomascus leucogenys	59.73	0.00e+00	1161.00
IUUC-Opr-070953	Ochotona princeps	52.12	0.00e+00	662.00
IUUC-Ont-072435	Oreochromis niloticus	48.06	0.00e+00	1096.00
IUUC-Oan-073339	Ornithorhynchus anatinus	65.10	0.00e+00	1501.00
IUUC-Ocu-073760	Oryctolagus cuniculus	63.07	0.00e+00	1417.00
IUUC-Ola-087015	Oryzias latipes	47.34	0.00e+00	959.00
IUUC-Oga-088960	Otolemur garnettii	64.13	0.00e+00	1471.00
IUUC-Oar-089853	Ovis aries	63.03	0.00e+00	1422.00
IUUC-Ptr-091093	Pan troglodytes	64.14	0.00e+00	1483.00
IUUC-Pan-091962	Papio anubis	64.00	0.00e+00	1471.00
IUUC-Psi-093691	Pelodiscus sinensis	77.71	0.00e+00	1827.00
IUUC-Pma-094428	Petromyzon marinus	64.75	1.00e-90	325.00
IUUC-Pfo-096983	Poecilia formosa	47.88	0.00e+00	1029.00
IUUC-Pab-097860	Pongo abelii	62.72	0.00e+00	1344.00
IUUC-Pca-100514	Procavia capensis	62.28	9.00e-142	498.00
IUUC-Pva-102771	Pteropus vampyrus	62.45	0.00e+00	1303.00
IUUC-Rno-105405	Rattus norvegicus	61.69	0.00e+00	1419.00
IUUC-Sha-107376	Sarcophilus harrisii	60.80	0.00e+00	1330.00
IUUC-Ssc-115819	Sus scrofa	56.74	0.00e+00	967.00
IUUC-Tgu-117262	Taeniopygia guttata	94.07	0.00e+00	2226.00
IUUC-Tru-117601	Takifugu rubripes	48.14	0.00e+00	1040.00
IUUC-Tsy-118996	Tarsius syrichta	54.50	0.00e+00	1095.00
IUUC-Tni-120682	Tetraodon nigroviridis	44.01	0.00e+00	862.00
IUUC-Tbe-127616	Tupaia belangeri	50.26	0.00e+00	794.00
IUUC-Ttr-129075	Tursiops truncatus	61.50	0.00e+00	1332.00
IUUC-Vpa-130108	Vicugna pacos	62.23	0.00e+00	1324.00
IUUC-Xtr-132623	Xenopus tropicalis	55.25	0.00e+00	1222.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence