iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021342

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02036266

Gene Name

WDR17

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000019958.1	ENSCPOT00000023295.1	ENSCPOP00000017278.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.20e-43	143.8	213	252
UBD/Beta-Prp	8.00e-47	159.8	79	288

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlrtgvllk 37
           gHt++v++l + ++   ll+sGs+D tikvWD+r+g +l 
   Q: 213  GHTAPVRGLMWnPEipYLLISGSWDYTIKVWDTREGSCLD 252
           8***********8784568******************986 PP

UBD/Beta-Prp

   S: 3    ktlkghhksvitcvkf.spdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvw..dlstgkcv 87
           + +++h k+ i c+++ ++d++ +at s dg+ ++  ++   l    ++h a+v  +++s++ k +++tg eD++++v+    s+ +++
   Q: 79   QRFNEHGKNGIFCIAWsHKDSKRIATCSGDGSCIIQTIDGRVL--HKYKHPAGVFGCDWSQNNKdMIATGCEDKNVRVYyvATSSDQPL 165
           66889999999*****99***************9988888555..5599**********998877**************8888899*** PP
   S: 88   htlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrt 174
            +++gh+++v  +++sp     l sGs+d  +r+wd  ++ c++ +l+gh++ v+++ ++p+   ll+sGs D t+++Wd + g++l+t
   Q: 166  KVFSGHTARVFHVKWSPlREGILCSGSDDGSVRIWDYTQDACIN-VLTGHTAPVRGLMWNPEIpYLLISGSWDYTIKVWDTREGSCLDT 253
           *****************666************************.******************************************** PP
   S: 175  ltgghtdsvyslsfdsng.kelvsgsldgtvklwdl 209
               h  +vy l+ ++ + + ++s+s+d+tv+lw+l
   Q: 254  VCD-HGADVYGLTCHPRRpFTMASCSRDSTVRLWSL 288
           *98.*********99999899*************97 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

GHVETIFDCK FKPDDPNLLA TASFDGTIKV WDINTLTAVY TSPGNEGIIY SLSWAPGGLN 60
CIAGHFQMWI YSKRAKMIQR FNEHGKNGIF CIAWSHKDSK RIATCSGDGS CIIQTIDGRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGACATGTGG AAACTATCTT TGACTGCAAA TTCAAACCTG ATGATCCGAA TCTTTTAGCA 60
ACAGCTTCTT TTGATGGCAC TATAAAAGTC TGGGATATAA ACACATTAAC AGCTGTGTAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001190	Ailuropoda melanoleuca	84.79	0.00e+00	1635.00
IUUC-Apl-003326	Anas platyrhynchos	80.37	0.00e+00	1557.00
IUUC-Aca-004349	Anolis carolinensis	80.99	0.00e+00	1537.00
IUUC-Ame-011366	Astyanax mexicanus	49.00	0.00e+00	829.00
IUUC-Bta-013275	Bos taurus	85.44	0.00e+00	1640.00
IUUC-Cja-018970	Callithrix jacchus	85.19	0.00e+00	1642.00
IUUC-Cfa-021237	Canis familiaris	84.28	0.00e+00	1623.00
IUUC-Cre-022569	Chlamydomonas reinhardtii	37.07	1.00e-69	258.00
IUUC-Csa-023687	Chlorocebus sabaeus	85.95	0.00e+00	1644.00
IUUC-Cho-024772	Choloepus hoffmanni	73.27	0.00e+00	727.00
IUUC-Csv-026021	Ciona savignyi	39.16	0.00e+00	691.00
IUUC-Dre-028031	Danio rerio	74.43	0.00e+00	1434.00
IUUC-Dno-029369	Dasypus novemcinctus	85.98	0.00e+00	1642.00
IUUC-Dor-030645	Dipodomys ordii	84.10	0.00e+00	1605.00
IUUC-Ete-032530	Echinops telfairi	80.39	0.00e+00	1523.00
IUUC-Eca-034405	Equus caballus	86.08	0.00e+00	1647.00
IUUC-Eeu-035006	Erinaceus europaeus	79.22	0.00e+00	895.00
IUUC-Fca-035965	Felis catus	84.27	0.00e+00	1619.00
IUUC-Fal-037136	Ficedula albicollis	78.89	0.00e+00	1493.00
IUUC-Gmo-039293	Gadus morhua	70.63	0.00e+00	1323.00
IUUC-Gga-040931	Gallus gallus	77.41	0.00e+00	1482.00
IUUC-Gac-042493	Gasterosteus aculeatus	68.94	0.00e+00	1295.00
IUUC-Ggo-045540	Gorilla gorilla	86.22	0.00e+00	1651.00
IUUC-Hsa-046708	Homo sapiens	86.05	0.00e+00	1660.00
IUUC-Lch-050135	Latimeria chalumnae	81.95	0.00e+00	1090.00
IUUC-Loc-051730	Lepisosteus oculatus	78.54	0.00e+00	1504.00
IUUC-Laf-053743	Loxodonta africana	85.65	0.00e+00	1620.00
IUUC-Mcc-055590	Macaca mulatta	86.16	0.00e+00	1647.00
IUUC-Meu-056328	Macropus eugenii	71.98	0.00e+00	1149.00
IUUC-Mga-059877	Meleagris gallopavo	77.35	0.00e+00	1491.00
IUUC-Mmr-060756	Microcebus murinus	86.70	0.00e+00	1658.00
IUUC-Mdo-062749	Monodelphis domestica	80.22	0.00e+00	1550.00
IUUC-Mmu-063668	Mus musculus	83.26	0.00e+00	1610.00
IUUC-Mpu-066856	Mustela putorius furo	84.76	0.00e+00	1610.00
IUUC-Mlu-067186	Myotis lucifugus	80.43	0.00e+00	1560.00
IUUC-Nle-070018	Nomascus leucogenys	85.84	0.00e+00	1664.00
IUUC-Ont-071482	Oreochromis niloticus	65.51	0.00e+00	1186.00
IUUC-Oan-073065	Ornithorhynchus anatinus	79.14	0.00e+00	1046.00
IUUC-Ocu-073786	Oryctolagus cuniculus	85.88	0.00e+00	1641.00
IUUC-Oga-088545	Otolemur garnettii	79.06	0.00e+00	1503.00
IUUC-Oar-090205	Ovis aries	84.54	0.00e+00	1622.00
IUUC-Ptr-091092	Pan troglodytes	85.73	0.00e+00	1658.00
IUUC-Pan-092430	Papio anubis	86.05	0.00e+00	1647.00
IUUC-Psi-093774	Pelodiscus sinensis	81.34	0.00e+00	1562.00
IUUC-Pfo-097414	Poecilia formosa	69.78	0.00e+00	1281.00
IUUC-Pab-097853	Pongo abelii	86.05	0.00e+00	1659.00
IUUC-Pca-100440	Procavia capensis	71.86	0.00e+00	748.00
IUUC-Pva-102838	Pteropus vampyrus	83.26	0.00e+00	1592.00
IUUC-Rno-104951	Rattus norvegicus	83.78	0.00e+00	1610.00
IUUC-Sha-107508	Sarcophilus harrisii	78.44	0.00e+00	1529.00
IUUC-Sar-113549	Sorex araneus	85.68	0.00e+00	857.00
IUUC-Ssc-115753	Sus scrofa	84.76	0.00e+00	1620.00
IUUC-Tgu-117315	Taeniopygia guttata	78.83	0.00e+00	1524.00
IUUC-Tru-118153	Takifugu rubripes	69.20	0.00e+00	1293.00
IUUC-Tsy-119384	Tarsius syrichta	80.04	0.00e+00	1532.00
IUUC-Tbe-127579	Tupaia belangeri	76.54	0.00e+00	1012.00
IUUC-Ttr-128488	Tursiops truncatus	81.01	0.00e+00	1449.00
IUUC-Vpa-130274	Vicugna pacos	81.61	0.00e+00	921.00
IUUC-Xtr-132199	Xenopus tropicalis	79.87	0.00e+00	1537.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence