iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000015564.1	ENSSHAT00000018486.1	ENSSHAP00000018336.1
ENSSHAG00000015564.1	ENSSHAT00000018487.1	ENSSHAP00000018337.1
ENSSHAG00000015564.1	ENSSHAT00000018488.1	ENSSHAP00000018338.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-54	179.8	607	646
UBD/Beta-Prp	3.90e-68	230.0	518	682

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd..tllvsGsdDgtikvWDlrtgvllk 37
           gHt++v++l + ++   ll+sGs+D ti+vWD+r+g +l 
   Q: 607  GHTAPVRGLMWnTEipYLLISGSWDSTIRVWDTREGICLD 646
           8**********85573668*****************9986 PP

UBD/Beta-Prp

   S: 49   sgheaevtavkfspdgk.ilvtgseDrtikvw..dlstgkcvhtlkghedsvlslsfsp.sgdklvsGshdrtirvwdletgqcleetl 133
           ++h a+v  +++s++ k +++tg eD++++v+    s+ +++ +++gh+++v  +++sp     l sGs+d t+r+wd  +++c++ tl
   Q: 518  YKHPAAVFGCDWSQNNKdMIATGCEDKNVRVYylATSSDQPLKVFTGHTAKVFHVRWSPlREGILCSGSDDGTVRIWDYTQDTCIN-TL 605
           56777777777776655577777777777777666666777777777777777777777545777777777777777777777777.77 PP
   S: 134  sghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsng.kelvsgsldgtvklwdl 209
           +gh++ v+++ ++ +   ll+sGs D+t+r+Wd + g +l+t    h  +vy l+ ++++ + ++s+s+d+tv+lw+l
   Q: 606  TGHTAPVRGLMWNTEIpYLLISGSWDSTIRVWDTREGICLDTVYD-HGADVYGLTCHPSRpFTMASCSRDSTVRLWSL 682
           777777777777777777777777777777777777777777765.77777777777777677777777777777775 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

YKYRTLFSNY SEEEHIIESS EELMMSQVKQ VGLLAAGCQP WNKDVCAASG DRFAYCATLA 60
IYIYQLDHQY NEFKLHAIMS EHKKTITAIS WCPHNPDIFV SGSADHIVII WNVAEQKVVA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CACCTGCCGC TGTCCGGTAC CGCCGCTGCC GCCGGCCCTT CCAGCAGGTA GGGAAGCGGG 60
ACTGTCCCGG TCCTGCTGGT CCGGGAGAAG GTTTGGGAGC GGAGTCAGTC GGGGTCGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001190	Ailuropoda melanoleuca	82.87	0.00e+00	2299.00
IUUC-Apl-003326	Anas platyrhynchos	84.66	0.00e+00	2303.00
IUUC-Aca-004349	Anolis carolinensis	82.96	0.00e+00	2253.00
IUUC-Ame-011366	Astyanax mexicanus	60.60	0.00e+00	1479.00
IUUC-Bta-013275	Bos taurus	83.18	0.00e+00	2301.00
IUUC-Cja-018970	Callithrix jacchus	83.41	0.00e+00	2299.00
IUUC-Cfa-021237	Canis familiaris	83.12	0.00e+00	2304.00
IUUC-Cpo-021342	Cavia porcellus	78.44	0.00e+00	1529.00
IUUC-Cre-022569	Chlamydomonas reinhardtii	28.57	4.00e-80	293.00
IUUC-Csa-023687	Chlorocebus sabaeus	83.56	0.00e+00	2301.00
IUUC-Cho-024772	Choloepus hoffmanni	74.13	0.00e+00	744.00
IUUC-Csv-026021	Ciona savignyi	40.14	0.00e+00	1027.00
IUUC-Dre-028031	Danio rerio	79.62	0.00e+00	2177.00
IUUC-Dno-029369	Dasypus novemcinctus	79.62	0.00e+00	2123.00
IUUC-Dor-030645	Dipodomys ordii	80.41	0.00e+00	2206.00
IUUC-Ete-032530	Echinops telfairi	78.19	0.00e+00	2110.00
IUUC-Eca-034405	Equus caballus	83.44	0.00e+00	2297.00
IUUC-Eeu-035006	Erinaceus europaeus	80.53	0.00e+00	981.00
IUUC-Fca-035965	Felis catus	82.73	0.00e+00	2282.00
IUUC-Fal-037136	Ficedula albicollis	83.42	0.00e+00	2244.00
IUUC-Gmo-039293	Gadus morhua	74.80	0.00e+00	1947.00
IUUC-Gga-040931	Gallus gallus	81.73	0.00e+00	2200.00
IUUC-Gac-042493	Gasterosteus aculeatus	75.13	0.00e+00	2021.00
IUUC-Ggo-045540	Gorilla gorilla	84.13	0.00e+00	2320.00
IUUC-Hsa-046708	Homo sapiens	84.64	0.00e+00	2336.00
IUUC-Lch-050135	Latimeria chalumnae	82.37	0.00e+00	1728.00
IUUC-Loc-051730	Lepisosteus oculatus	83.98	0.00e+00	2275.00
IUUC-Laf-053743	Loxodonta africana	83.33	0.00e+00	2283.00
IUUC-Mcc-055590	Macaca mulatta	83.33	0.00e+00	2299.00
IUUC-Meu-056328	Macropus eugenii	74.14	0.00e+00	1823.00
IUUC-Mga-059877	Meleagris gallopavo	80.58	0.00e+00	2195.00
IUUC-Mmr-060756	Microcebus murinus	83.95	0.00e+00	2309.00
IUUC-Mdo-062749	Monodelphis domestica	89.78	0.00e+00	2455.00
IUUC-Mmu-063668	Mus musculus	81.64	0.00e+00	2260.00
IUUC-Mpu-066856	Mustela putorius furo	82.18	0.00e+00	2241.00
IUUC-Mlu-067186	Myotis lucifugus	77.65	0.00e+00	2162.00
IUUC-Nle-070018	Nomascus leucogenys	84.02	0.00e+00	2327.00
IUUC-Ont-071482	Oreochromis niloticus	70.03	0.00e+00	1863.00
IUUC-Oan-073065	Ornithorhynchus anatinus	82.91	0.00e+00	1734.00
IUUC-Ocu-073786	Oryctolagus cuniculus	83.26	0.00e+00	2289.00
IUUC-Oga-088545	Otolemur garnettii	78.85	0.00e+00	2138.00
IUUC-Oar-090205	Ovis aries	82.64	0.00e+00	2269.00
IUUC-Ptr-091092	Pan troglodytes	84.49	0.00e+00	2334.00
IUUC-Pan-092430	Papio anubis	83.41	0.00e+00	2303.00
IUUC-Psi-093774	Pelodiscus sinensis	85.42	0.00e+00	2322.00
IUUC-Pfo-097414	Poecilia formosa	74.58	0.00e+00	1956.00
IUUC-Pab-097853	Pongo abelii	84.33	0.00e+00	2331.00
IUUC-Pca-100440	Procavia capensis	69.29	0.00e+00	710.00
IUUC-Pva-102838	Pteropus vampyrus	81.80	0.00e+00	2245.00
IUUC-Rno-104951	Rattus norvegicus	79.49	0.00e+00	2187.00
IUUC-Sar-113549	Sorex araneus	85.75	0.00e+00	1489.00
IUUC-Ssc-115753	Sus scrofa	82.68	0.00e+00	1796.00
IUUC-Tgu-117315	Taeniopygia guttata	83.12	0.00e+00	2262.00
IUUC-Tru-118153	Takifugu rubripes	74.14	0.00e+00	1989.00
IUUC-Tsy-119384	Tarsius syrichta	78.41	0.00e+00	2143.00
IUUC-Tni-120820	Tetraodon nigroviridis	80.09	1.00e-106	378.00
IUUC-Tbe-127579	Tupaia belangeri	70.85	0.00e+00	955.00
IUUC-Ttr-128488	Tursiops truncatus	77.65	0.00e+00	2100.00
IUUC-Vpa-130274	Vicugna pacos	78.94	0.00e+00	956.00
IUUC-Xtr-132199	Xenopus tropicalis	84.52	0.00e+00	2322.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence