iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Zm00001d051241	Zm00001d051241_T001	Zm00001d051241_T001
Zm00001d051241	Zm00001d051241_T002	Zm00001d051241_T002
Zm00001d051241	Zm00001d051241_T004	Zm00001d051241_T004
Zm00001d051241	Zm00001d051241_T003	Zm00001d051241_T003

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.10e-23	83.4	487	517

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWD 29
           Htd vtc++f   +d++++sGs D ++++W+
   Q: 487  HTDYVTCIQFnpvDDRYFISGSLDEKVRIWS 517
           ************766***************9 PP

Organism

Zea mays

Protein Sequence
(Fasta)

MNVDEEVESG EEEEEDLFYE SLDRILSSSG SSTSASDDDG ADSPRRRRGC DAPVAAAAAA 60
LDLWTSQPSP VQERRRRLLQ LMGLIGDPSL AGFETGRSAS EDAAGPPPAS PVSRSRSGGA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCGCGACAA CGGACGACGG CGACGCGAGC AGTCGAGTAA AGACGCGGTG GGGCGGCGCT 60
GCGCTGGGCG GGTGGTGAGA TCAGAGGAAG GAACGGGATC GCTCCCGGTT AGGTTGTCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Bdi-014809	Brachypodium distachyon	71.52	0.00e+00	935.00
IUUC-Dor-030184	Dipodomys ordii	47.72	3.00e-48	186.00
IUUC-Hvu-047755	Hordeum vulgare	69.16	0.00e+00	867.00
IUUC-Oba-075809	Oryza barthii	69.89	0.00e+00	949.00
IUUC-Ogu-077983	Oryza glumaepatula	69.88	0.00e+00	952.00
IUUC-Oin-079380	Oryza indica	70.01	0.00e+00	956.00
IUUC-Olo-080307	Oryza longistaminata	66.30	0.00e+00	841.00
IUUC-Ome-081629	Oryza meridionalis	69.89	0.00e+00	949.00
IUUC-Oni-082328	Oryza nivara	70.01	0.00e+00	956.00
IUUC-Opu-083402	Oryza punctata	70.18	0.00e+00	991.00
IUUC-Oru-085107	Oryza rufipogon	69.37	0.00e+00	984.00
IUUC-Osa-086211	Oryza sativa	72.83	0.00e+00	653.00
IUUC-Pva-102846	Pteropus vampyrus	47.72	2.00e-48	187.00
IUUC-Sbi-114454	Sorghum bicolor	90.03	0.00e+00	1262.00
IUUC-Tae-123388	Triticum aestivum	67.21	0.00e+00	926.00
IUUC-Tbe-127531	Tupaia belangeri	47.72	3.00e-47	183.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence