iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Apl-003770

Ensembl Protein ID

ENSAPLP00000007396.1

UniProt Accession

U3IJH4; U3IJH4_ANAPL

Genbank Protein ID

ENSAPLP00000007396

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ADON01034753

Gene Name

KDM5B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAPLG00000007715.1	ENSAPLT00000008058.1	ENSAPLP00000007396.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	4.00e-21	74.7	246	292

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           vCl+Cg+g +++  l+ C+ C++ +H  Cl ++   ++p+ + w Cp+C 
   Q: 246  VCLLCGSGNDED-RLLLCDGCDDSYHTFCLIPP-LHDVPKGD-WRCPQCL 292
           8********988.6*******************.*******7.******5 PP

Organism

Anas platyrhynchos

Protein Sequence
(Fasta)

QDWQPPFACD VDKLHFTPRI QRLNELEAQT RVKLNFLDQI AKFWELQGCT LKIPHVERKI 60
LDLFQLNRLV AEEGGFDVVC KERKWTKIAT RMGFAPGKAV GSHIRAHYER ILYPYNLFQS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGGACTGGC AGCCTCCATT TGCATGTGAT GTTGATAAGC TTCACTTCAC TCCGAGGATC 60
CAGAGGCTTA ATGAACTAGA GGTAAGCTGT AAAACTAAAC ATTGCTTCTG CTCCAGAATG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2

Pfam

PF01388--ARID
PF02373--JmjC
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00249--PHD

Gene Ontology

GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0034648--F:histone demethylase activity (H3-dimethyl-K4 specific)
GO:0034647--F:histone demethylase activity (H3-trimethyl-K4 specific)
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0003714--F:transcription corepressor activity
GO:0008270--F:zinc ion binding
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0010628--P:positive regulation of gene expression
GO:0033601--P:positive regulation of mammary gland epithelial cell proliferation
GO:0009791--P:post-embryonic development
GO:2000864--P:regulation of estradiol secretion
GO:0007338--P:single fertilization
GO:0061038--P:uterus morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	34.04	2.00e-97	350.00
IUUC-Aml-001963	Ailuropoda melanoleuca	86.21	0.00e+00	2152.00
IUUC-Aca-004867	Anolis carolinensis	84.88	0.00e+00	2166.00
IUUC-Ath-007218	Arabidopsis thaliana	35.56	3.00e-09	58.50
IUUC-Acl-008162	Aspergillus clavatus	30.40	9.00e-113	402.00
IUUC-Ani-009139	Aspergillus nidulans	32.15	5.00e-112	399.00
IUUC-Aor-010155	Aspergillus oryzae	30.02	6.00e-108	385.00
IUUC-Ame-010620	Astyanax mexicanus	68.33	0.00e+00	1734.00
IUUC-Bgr-012241	Blumeria graminis	28.91	3.00e-104	374.00
IUUC-Bta-012733	Bos taurus	84.68	0.00e+00	2104.00
IUUC-Bci-013992	Botrytis cinerea	34.71	5.00e-108	386.00
IUUC-Bdi-014050	Brachypodium distachyon	30.83	8.00e-105	375.00
IUUC-Bol-015336	Brassica oleracea	36.45	2.00e-14	75.90
IUUC-Cja-019050	Callithrix jacchus	85.55	0.00e+00	2167.00
IUUC-Cfa-021015	Canis familiaris	86.23	0.00e+00	2152.00
IUUC-Cpo-022340	Cavia porcellus	85.63	0.00e+00	2113.00
IUUC-Cre-022637	Chlamydomonas reinhardtii	49.06	8.00e-08	47.80
IUUC-Csa-023441	Chlorocebus sabaeus	85.96	0.00e+00	2151.00
IUUC-Cho-024823	Choloepus hoffmanni	88.76	0.00e+00	1472.00
IUUC-Cne-026851	Cryptococcus neoformans	30.38	6.00e-112	399.00
IUUC-Dre-027707	Danio rerio	66.11	0.00e+00	1666.00
IUUC-Dno-028978	Dasypus novemcinctus	86.20	0.00e+00	2155.00
IUUC-Dor-030854	Dipodomys ordii	75.97	0.00e+00	1406.00
IUUC-Ete-032760	Echinops telfairi	82.18	0.00e+00	1534.00
IUUC-Eca-034370	Equus caballus	86.44	0.00e+00	2098.00
IUUC-Eeu-035012	Erinaceus europaeus	70.92	0.00e+00	1648.00
IUUC-Fca-035494	Felis catus	86.96	0.00e+00	2141.00
IUUC-Fal-037631	Ficedula albicollis	91.29	0.00e+00	2320.00
IUUC-Fox-037694	Fusarium oxysporum	32.28	6.00e-101	362.00
IUUC-Fso-038127	Fusarium solani	29.09	1.00e-105	378.00
IUUC-Gmo-039522	Gadus morhua	65.47	0.00e+00	1501.00
IUUC-Ggr-039929	Gaeumannomyces graminis	32.30	2.00e-102	367.00
IUUC-Gga-040802	Gallus gallus	93.83	0.00e+00	2373.00
IUUC-Gac-041461	Gasterosteus aculeatus	66.83	0.00e+00	1664.00
IUUC-Gma-042675	Glycine max	33.67	2.00e-101	364.00
IUUC-Ggo-044856	Gorilla gorilla	68.00	0.00e+00	1580.00
IUUC-Hsa-045888	Homo sapiens	83.54	0.00e+00	2154.00
IUUC-Hvu-047583	Hordeum vulgare	43.04	8.00e-16	79.00
IUUC-Itr-048297	Ictidomys tridecemlineatus	86.40	0.00e+00	2134.00
IUUC-Lch-050483	Latimeria chalumnae	70.20	0.00e+00	1828.00
IUUC-Loc-052550	Lepisosteus oculatus	76.17	0.00e+00	1889.00
IUUC-Laf-053761	Loxodonta africana	84.90	0.00e+00	2125.00
IUUC-Mcc-055505	Macaca mulatta	83.46	0.00e+00	2156.00
IUUC-Mpo-057317	Magnaporthe poae	33.33	1.00e-105	378.00
IUUC-Mga-059358	Meleagris gallopavo	93.36	0.00e+00	2358.00
IUUC-Mmr-060863	Microcebus murinus	85.81	0.00e+00	2132.00
IUUC-Mdo-061957	Monodelphis domestica	86.50	0.00e+00	2221.00
IUUC-Mmu-063944	Mus musculus	84.79	0.00e+00	2086.00
IUUC-Mac-065069	Musa acuminata	35.14	5.00e-08	54.30
IUUC-Mpu-066719	Mustela putorius furo	86.40	0.00e+00	2152.00
IUUC-Mlu-068086	Myotis lucifugus	82.50	0.00e+00	2027.00
IUUC-Nfi-068430	Neosartorya fischeri	30.65	5.00e-109	389.00
IUUC-Ncr-068763	Neurospora crassa	29.44	1.00e-109	391.00
IUUC-Nle-069256	Nomascus leucogenys	83.63	0.00e+00	2159.00
IUUC-Ont-071701	Oreochromis niloticus	67.45	0.00e+00	1701.00
IUUC-Oan-073568	Ornithorhynchus anatinus	87.94	0.00e+00	2212.00
IUUC-Ocu-073961	Oryctolagus cuniculus	83.81	0.00e+00	2105.00
IUUC-Oba-075388	Oryza barthii	31.41	3.00e-72	267.00
IUUC-Obr-076296	Oryza brachyantha	39.50	6.00e-88	320.00
IUUC-Ogl-077886	Oryza glaberrima	38.83	2.00e-16	81.30
IUUC-Ogu-079040	Oryza glumaepatula	36.32	5.00e-72	266.00
IUUC-Oin-079273	Oryza indica	43.94	2.00e-14	71.60
IUUC-Olo-080668	Oryza longistaminata	38.83	6.00e-16	80.50
IUUC-Ome-081764	Oryza meridionalis	40.46	4.00e-89	323.00
IUUC-Oni-083012	Oryza nivara	36.32	7.00e-72	266.00
IUUC-Opu-083164	Oryza punctata	40.69	4.00e-86	313.00
IUUC-Oru-084630	Oryza rufipogon	36.32	7.00e-72	266.00
IUUC-Osa-085487	Oryza sativa	38.83	2.00e-16	81.30
IUUC-Ola-086448	Oryzias latipes	65.06	0.00e+00	1606.00
IUUC-Oga-088501	Otolemur garnettii	81.23	0.00e+00	1789.00
IUUC-Oar-090162	Ovis aries	84.20	0.00e+00	2097.00
IUUC-Ptr-090816	Pan troglodytes	83.62	0.00e+00	2163.00
IUUC-Pan-092764	Papio anubis	85.96	0.00e+00	2151.00
IUUC-Psi-093918	Pelodiscus sinensis	87.52	0.00e+00	1999.00
IUUC-Ppa-095839	Physcomitrella patens	44.58	3.00e-16	81.60
IUUC-Pfo-096777	Poecilia formosa	67.97	0.00e+00	1696.00
IUUC-Pab-097854	Pongo abelii	83.08	0.00e+00	1883.00
IUUC-Pca-100241	Procavia capensis	81.15	0.00e+00	1279.00
IUUC-Ppe-101504	Prunus persica	42.54	1.00e-101	365.00
IUUC-Pva-103035	Pteropus vampyrus	80.23	0.00e+00	1937.00
IUUC-Pgr-103434	Puccinia graminis	32.54	1.00e-19	90.10
IUUC-Rno-105574	Rattus norvegicus	84.60	0.00e+00	2046.00
IUUC-Sce-106207	Saccharomyces cerevisiae	36.23	6.00e-75	275.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	30.28	6.00e-112	399.00
IUUC-Sly-111298	Solanum lycopersicum	43.57	1.00e-103	371.00
IUUC-Sar-113477	Sorex araneus	83.27	0.00e+00	2096.00
IUUC-Ssc-116132	Sus scrofa	85.14	0.00e+00	2125.00
IUUC-Tgu-117452	Taeniopygia guttata	92.63	0.00e+00	2325.00
IUUC-Tru-117561	Takifugu rubripes	65.05	0.00e+00	1621.00
IUUC-Tsy-119271	Tarsius syrichta	85.99	0.00e+00	1658.00
IUUC-Tni-119650	Tetraodon nigroviridis	66.67	0.00e+00	1640.00
IUUC-Tca-121478	Theobroma cacao	42.79	3.00e-105	377.00
IUUC-Tae-125894	Triticum aestivum	35.15	8.00e-98	352.00
IUUC-Tur-126632	Triticum urartu	34.58	7.00e-98	352.00
IUUC-Tbe-127890	Tupaia belangeri	77.46	0.00e+00	1033.00
IUUC-Ttr-128546	Tursiops truncatus	81.11	0.00e+00	1742.00
IUUC-Vda-129733	Verticillium dahliae	30.29	2.00e-102	367.00
IUUC-Vpa-130432	Vicugna pacos	79.78	0.00e+00	1293.00
IUUC-Xtr-132008	Xenopus tropicalis	74.98	0.00e+00	1885.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence