iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Vvi-131133

UUCD1 version

UUC-ViV-00241

Ensembl Protein ID

VIT_10s0003g03710.t01

UniProt Accession

D7TK89; D7TK89_VITVI

Genbank Protein ID

CBI30911.3

Protein Name

Putative uncharacterized protein

Genbank Nucleotide ID

FN595992

Gene Name

CUL4; VIT_10s0003g03710

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_10s0003g03710	VIT_10s0003g03710.t01	VIT_10s0003g03710.t01

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/Cullin	7.10e-188	626.7	108	703

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/Cullin

   S: 1    klreavkkilrqesvkkeyeelytavynlclskvgaklYkklkevleefi.kqvkkkveesedeq.lLktynreWekfreqlkvlrki 86
           kl++a+++i  ++    ++e+ly+av +lcl+k+g +lY+++++ +e++i +++++ v +s d   +L  ++++W++ + q+ ++r i
   Q: 108  KLKSAISAIFLKQPDPCDLEKLYQAVNDLCLHKMGGNLYQRIEKECESHIrAALQSLVGQSPDLVvFLSLVEKCWQDLCDQMLMIRGI 195
           58999*********************************************7788999999999999********************** PP
   S: 87   fayldrtyvkkskkvsevrkLaldlwrkeived..ikkrllelllklieaeRkgeavdrrllsgvveslveLslnklaiykesFEakf 172
            +yldrtyvk++ +v + ++++l+l+rk++  +  ++++++  ll++ie+eR geavdr ll+ + +++  L+     iy esFE++f
   Q: 196  ALYLDRTYVKQTPNVRSLWDMGLQLFRKHLSLSpeVEHKTVTGLLRMIERERLGEAVDRTLLNHLLKMFTALG-----IYLESFEKPF 278
           *****************************987778************************************96.....********** PP
   S: 173  leatqefykaesaeflqenevdeYlkkvearlneeeeraaryleestetkLlevvekeliakhlesll.aelvallrdkktedlsrmy 259
           le t+efy+ae  +++q+++v +Ylk+ve rl+ee+er+  yl++st ++L+++ e++l++ h+ ++l +++  l++ ++ edl+rmy
   Q: 279  LECTSEFYAAEGMKYMQQSDVPDYLKHVEIRLHEEHERCLLYLDASTRKPLVATAERQLLERHISAILdKGFMMLMDGNRIEDLQRMY 366
           ********************************************************************99****************** PP
   S: 260  kLlsrvlngleellkeleshikeqgkaaltaeekekdpkkyVerllelknklqklvseaFnndakFlkaldkafetfvnknsvlkaak 347
            L+srv n le l++ l+s+i+  g+ ++++eek+kd   +V  lle+k  l+ + +e+F+ +++F ++++ afe+ +n +      +
   Q: 367  LLFSRV-NALESLRQALSSYIRRTGQGIVMDEEKDKD---MVSCLLEFKASLDTIWEESFSRNEAFCNTIKDAFEHLINLR----QNR 446
           *****9.68****************************...****************************************9....566 PP
   S: 348  spEllAryiDqlLrksskglteeeleaqldkvllvfkyisekdvFekyYkkhLakRLlsgksasseaEesviekLkeecgaeftskLe 435
            +El+A++ D++Lr+++kg+ eeele +ldkvl++f++i++kdvFe++Ykk+LakRLl+gksas +aE+s+i+kLk+ecg +ft+kLe
   Q: 447  PAELIAKFLDEKLRAGNKGTSEEELEGTLDKVLVLFRFIQGKDVFEAFYKKDLAKRLLLGKSASIDAEKSMITKLKTECGSQFTNKLE 534
           66************************************************************************************** PP
   S: 436  rMfqdlkvSedlnrqFkeeken.teesesvelsvlvLsagaWptasetekvsLPaelektiekfeefYlekhsgRkLqWqhtlgrael 522
           +Mf+d+++S+++n+ Fk+  ++ t+  +++e+sv vL++g+Wpt++ +  v LP+el+ ++++f+efYl+k sgR+L Wq +lg++ l
   Q: 535  GMFKDIELSKEINESFKQSSQArTKLPTGIEMSVHVLTTGYWPTYPPMD-VRLPHELNVYQDIFKEFYLSKYSGRRLMWQNSLGHCVL 621
           *****************87765155669******************988.************************************** PP
   S: 523  kaelkkgkyelqVstfQmavLLafnnsekvsveelkkatelpeeeLrrtlqsLvsskkqvlkkepeskeieeedlfsvNqef 604
           kae+ kgk+el+Vs fQ++vL++fn+ +k+s++++k++t+++++eLrrtlqsL+++k +vl+k p+++e+e++d+f++N+ f
   Q: 622  KAEFPKGKKELAVSLFQTVVLMLFNDAQKLSFQDIKDSTGIEDKELRRTLQSLACGKVRVLQKLPKGREVEDDDSFMFNEGF 703
           *******************************************************************************987 PP

Organism

Vitis vinifera

Protein Sequence
(Fasta)

MKKAKSQAVA CSLDPKNGLQ PPPHPPPPSS HHFPDDDFDP SAMALDDDLK PDDADAAACS 60
RPSAGGVTAN LSRKKATPPQ PAKKQLVIKL LKAKPTLPTN FEEDTWAKLK SAISAIFLKQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTCTGATCTA GTTCTACGAA CATATTATAC ATTTGCCCTC AGGAAGCTTA CAATGCCCTC 60
CTGACCACTT TGATGTCTCA CCCCACCAAG CGCTCCCTCA GCAACACTAC CACCTCCTCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR016157--Cullin_CS
IPR016158--Cullin_homology
IPR001373--Cullin_N
IPR019559--Cullin_neddylation_domain
IPR016159--Cullin_repeat-like_dom
IPR011991--WHTH_DNA-bd_dom

PROSITE

PS01256--CULLIN_1
PS50069--CULLIN_2

Pfam

PF00888--Cullin
PF10557--Cullin_Nedd8

SMART

SM00182--CULLIN
SM00884--Cullin_Nedd8

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005829--C:cytosol
GO:0005634--C:nucleus
GO:0031625--F:ubiquitin protein ligase binding
GO:0048825--P:cotyledon development
GO:0006281--P:DNA repair
GO:0009908--P:flower development
GO:0009755--P:hormone-mediated signaling pathway
GO:0010100--P:negative regulation of photomorphogenesis
GO:0009640--P:photomorphogenesis
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0048575--P:short-day photoperiodism, flowering
GO:0010182--P:sugar mediated signaling pathway

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000285	Aegilops tauschii	82.42	0.00e+00	1270.00
IUUC-Aml-002062	Ailuropoda melanoleuca	59.28	0.00e+00	856.00
IUUC-Atr-002727	Amborella trichopoda	89.46	0.00e+00	1298.00
IUUC-Apl-004157	Anas platyrhynchos	58.87	0.00e+00	863.00
IUUC-Aca-004430	Anolis carolinensis	59.75	0.00e+00	859.00
IUUC-Aly-006547	Arabidopsis lyrata	86.68	0.00e+00	1269.00
IUUC-Ath-006748	Arabidopsis thaliana	86.14	0.00e+00	1253.00
IUUC-Acl-008359	Aspergillus clavatus	35.96	3.00e-126	445.00
IUUC-Afl-008567	Aspergillus flavus	36.85	3.00e-135	475.00
IUUC-Afu-008833	Aspergillus fumigatus	36.86	9.00e-132	463.00
IUUC-Ani-009373	Aspergillus nidulans	37.31	9.00e-141	493.00
IUUC-Ang-009622	Aspergillus niger	38.90	6.00e-142	497.00
IUUC-Aor-010241	Aspergillus oryzae	37.16	4.00e-133	468.00
IUUC-Ate-010251	Aspergillus terreus	38.24	9.00e-142	496.00
IUUC-Ame-011580	Astyanax mexicanus	58.42	0.00e+00	853.00
IUUC-Bgr-012219	Blumeria graminis	36.19	2.00e-117	416.00
IUUC-Bta-013244	Bos taurus	59.28	0.00e+00	852.00
IUUC-Bci-013744	Botrytis cinerea	37.69	3.00e-129	455.00
IUUC-Bdi-014223	Brachypodium distachyon	82.38	0.00e+00	1282.00
IUUC-Bol-015666	Brassica oleracea	86.37	0.00e+00	1312.00
IUUC-Bra-018012	Brassica rapa	86.47	0.00e+00	1290.00
IUUC-Cja-019180	Callithrix jacchus	59.28	0.00e+00	856.00
IUUC-Cfa-021189	Canis familiaris	59.42	0.00e+00	856.00
IUUC-Cpo-021928	Cavia porcellus	58.16	0.00e+00	855.00
IUUC-Cre-022739	Chlamydomonas reinhardtii	54.85	0.00e+00	707.00
IUUC-Csa-023831	Chlorocebus sabaeus	59.28	0.00e+00	855.00
IUUC-Cho-024899	Choloepus hoffmanni	63.17	0.00e+00	649.00
IUUC-Cin-025727	Ciona intestinalis	55.28	0.00e+00	648.00
IUUC-Csv-026117	Ciona savignyi	45.62	0.00e+00	681.00
IUUC-Cgl-026761	Colletotrichum gloeosporioides	37.28	4.00e-130	457.00
IUUC-Cme-027355	Cyanidioschyzon merolae	34.08	2.00e-116	412.00
IUUC-Dre-027916	Danio rerio	58.39	0.00e+00	847.00
IUUC-Dno-028879	Dasypus novemcinctus	54.70	0.00e+00	775.00
IUUC-Dor-030698	Dipodomys ordii	58.75	0.00e+00	818.00
IUUC-Dse-031159	Dothistroma septosporum	35.48	2.00e-122	432.00
IUUC-Dme-031652	Drosophila melanogaster	55.68	0.00e+00	781.00
IUUC-Ete-033101	Echinops telfairi	55.26	0.00e+00	752.00
IUUC-Eca-033952	Equus caballus	57.85	0.00e+00	847.00
IUUC-Eeu-034767	Erinaceus europaeus	59.70	0.00e+00	804.00
IUUC-Fca-036211	Felis catus	59.07	0.00e+00	850.00
IUUC-Fal-037248	Ficedula albicollis	59.01	0.00e+00	862.00
IUUC-Fox-037854	Fusarium oxysporum	38.11	4.00e-125	441.00
IUUC-Fso-038138	Fusarium solani	37.23	8.00e-134	470.00
IUUC-Gmo-038754	Gadus morhua	57.45	0.00e+00	844.00
IUUC-Ggr-040003	Gaeumannomyces graminis	34.90	9.00e-105	374.00
IUUC-Gga-041002	Gallus gallus	59.08	0.00e+00	862.00
IUUC-Gac-041555	Gasterosteus aculeatus	58.09	0.00e+00	843.00
IUUC-Gma-043960	Glycine max	94.63	0.00e+00	1409.00
IUUC-Ggo-045468	Gorilla gorilla	58.33	0.00e+00	803.00
IUUC-Hsa-045679	Homo sapiens	58.86	0.00e+00	833.00
IUUC-Hvu-047510	Hordeum vulgare	76.92	0.00e+00	753.00
IUUC-Itr-048365	Ictidomys tridecemlineatus	59.42	0.00e+00	855.00
IUUC-Lch-049858	Latimeria chalumnae	58.70	0.00e+00	872.00
IUUC-Lpe-051446	Leersia perrieri	84.30	0.00e+00	1298.00
IUUC-Loc-051804	Lepisosteus oculatus	56.58	0.00e+00	829.00
IUUC-Lma-053080	Leptosphaeria maculans	34.83	8.00e-131	460.00
IUUC-Laf-053701	Loxodonta africana	59.34	0.00e+00	856.00
IUUC-Mcc-055538	Macaca mulatta	58.46	0.00e+00	838.00
IUUC-Meu-056492	Macropus eugenii	47.19	2.00e-82	299.00
IUUC-Mor-057102	Magnaporthe oryzae	35.13	9.00e-126	443.00
IUUC-Mpo-057342	Magnaporthe poae	36.92	6.00e-108	384.00
IUUC-Mtr-058660	Medicago truncatula	90.54	0.00e+00	1381.00
IUUC-Mla-058936	Melampsora laricipopulina	38.81	7.00e-111	393.00
IUUC-Mga-059754	Meleagris gallopavo	58.87	0.00e+00	864.00
IUUC-Mvi-060455	Microbotryum violaceum	42.88	1.00e-150	526.00
IUUC-Mmr-060870	Microcebus murinus	59.01	0.00e+00	849.00
IUUC-Mdo-062015	Monodelphis domestica	58.55	0.00e+00	855.00
IUUC-Mmu-063751	Mus musculus	59.15	0.00e+00	856.00
IUUC-Mac-064443	Musa acuminata	89.84	0.00e+00	1388.00
IUUC-Mpu-065903	Mustela putorius furo	58.83	0.00e+00	855.00
IUUC-Mlu-068213	Myotis lucifugus	58.42	0.00e+00	855.00
IUUC-Nfi-068363	Neosartorya fischeri	37.79	2.00e-135	476.00
IUUC-Ncr-068950	Neurospora crassa	37.22	2.00e-126	446.00
IUUC-Nle-069606	Nomascus leucogenys	58.86	0.00e+00	833.00
IUUC-Ont-071562	Oreochromis niloticus	56.73	0.00e+00	822.00
IUUC-Oan-073607	Ornithorhynchus anatinus	58.96	0.00e+00	859.00
IUUC-Ocu-074446	Oryctolagus cuniculus	59.28	0.00e+00	855.00
IUUC-Oba-075198	Oryza barthii	84.49	0.00e+00	1291.00
IUUC-Obr-076095	Oryza brachyantha	84.35	0.00e+00	1293.00
IUUC-Ogl-077032	Oryza glaberrima	84.49	0.00e+00	1292.00
IUUC-Ogu-078051	Oryza glumaepatula	84.04	0.00e+00	1292.00
IUUC-Oin-079399	Oryza indica	77.96	0.00e+00	1138.00
IUUC-Olo-080988	Oryza longistaminata	83.33	0.00e+00	1284.00
IUUC-Ome-081600	Oryza meridionalis	83.33	0.00e+00	1282.00
IUUC-Oni-082623	Oryza nivara	83.47	0.00e+00	1283.00
IUUC-Opu-083762	Oryza punctata	82.82	0.00e+00	1280.00
IUUC-Oru-084499	Oryza rufipogon	84.49	0.00e+00	1291.00
IUUC-Ola-087157	Oryzias latipes	58.14	0.00e+00	845.00
IUUC-Olu-087650	Ostreococcus lucimarinus	54.84	0.00e+00	721.00
IUUC-Oga-088416	Otolemur garnettii	58.60	0.00e+00	829.00
IUUC-Oar-090230	Ovis aries	59.28	0.00e+00	852.00
IUUC-Ptr-091177	Pan troglodytes	58.86	0.00e+00	833.00
IUUC-Pan-091729	Papio anubis	59.28	0.00e+00	855.00
IUUC-Psi-093773	Pelodiscus sinensis	58.74	0.00e+00	858.00
IUUC-Pma-094678	Petromyzon marinus	54.14	0.00e+00	625.00
IUUC-Pno-094946	Phaeosphaeria nodorum	36.40	3.00e-114	405.00
IUUC-Ppa-095688	Physcomitrella patens	82.09	0.00e+00	1249.00
IUUC-Pfo-097037	Poecilia formosa	57.68	0.00e+00	824.00
IUUC-Pab-097622	Pongo abelii	58.58	0.00e+00	827.00
IUUC-Pop-099751	Populus trichocarpa	82.56	0.00e+00	657.00
IUUC-Pca-100391	Procavia capensis	55.04	2.00e-180	624.00
IUUC-Ppe-101142	Prunus persica	90.32	0.00e+00	1439.00
IUUC-Pva-102995	Pteropus vampyrus	62.23	0.00e+00	637.00
IUUC-Pgr-103334	Puccinia graminis	35.06	3.00e-106	378.00
IUUC-Ptt-103903	Puccinia triticina	41.37	3.00e-95	342.00
IUUC-Pte-104167	Pyrenophora teres	35.44	1.00e-132	466.00
IUUC-Pyt-104736	Pyrenophora triticirepentis	35.58	1.00e-132	466.00
IUUC-Rno-106119	Rattus norvegicus	59.01	0.00e+00	853.00
IUUC-Sha-106958	Sarcophilus harrisii	58.55	0.00e+00	858.00
IUUC-Sja-107940	Schizosaccharomyces japonicus	34.06	5.00e-105	374.00
IUUC-Spo-108109	Schizosaccharomyces pombe	35.23	3.00e-106	378.00
IUUC-Ssl-108537	Sclerotinia sclerotiorum	37.75	8.00e-129	453.00
IUUC-Smo-108872	Selaginella moellendorffii	82.84	0.00e+00	1293.00
IUUC-Sit-110626	Setaria italica	84.10	0.00e+00	1286.00
IUUC-Sly-111497	Solanum lycopersicum	88.65	0.00e+00	1427.00
IUUC-Sar-113581	Sorex araneus	50.95	1.00e-171	595.00
IUUC-Sbi-113931	Sorghum bicolor	84.24	0.00e+00	1290.00
IUUC-Sre-114943	Sporisorium reilianum	39.36	1.00e-134	473.00
IUUC-Ssc-116133	Sus scrofa	58.91	0.00e+00	818.00
IUUC-Tgu-116462	Taeniopygia guttata	58.74	0.00e+00	855.00
IUUC-Tru-118299	Takifugu rubripes	58.30	0.00e+00	849.00
IUUC-Tsy-119517	Tarsius syrichta	68.57	6.00e-146	510.00
IUUC-Tni-119798	Tetraodon nigroviridis	55.81	0.00e+00	817.00
IUUC-Tca-121626	Theobroma cacao	88.86	0.00e+00	1437.00
IUUC-Tre-121907	Trichoderma reesei	37.15	5.00e-130	457.00
IUUC-Tvi-122568	Trichoderma virens	36.92	3.00e-129	455.00
IUUC-Tae-123442	Triticum aestivum	82.01	0.00e+00	1274.00
IUUC-Tur-126032	Triticum urartu	83.80	0.00e+00	1257.00
IUUC-Tme-127162	Tuber melanosporum	40.03	4.00e-138	484.00
IUUC-Tbe-127658	Tupaia belangeri	58.16	0.00e+00	819.00
IUUC-Ttr-129112	Tursiops truncatus	54.47	0.00e+00	760.00
IUUC-Uma-129531	Ustilago maydis	38.18	4.00e-114	404.00
IUUC-Vda-129701	Verticillium dahliae	38.50	2.00e-139	489.00
IUUC-Vpa-130217	Vicugna pacos	53.23	0.00e+00	734.00
IUUC-Xtr-132724	Xenopus tropicalis	57.71	0.00e+00	843.00
IUUC-Xma-134149	Xiphophorus maculatus	58.03	0.00e+00	848.00
IUUC-Zma-135529	Zea mays	83.83	0.00e+00	1286.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence