iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pma-094287

UUCD1 version

UUC-PeM-00331

Ensembl Protein ID

ENSPMAP00000006717.1

UniProt Accession

S4RND1; S4RND1_PETMA

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000006054.1	ENSPMAT00000006747.1	ENSPMAP00000006717.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-16	57.7	112	145

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH ++v+c+++ ++ + l s+sdD  i  W++ +
   Q: 112  GHDGRVNCVQWhPEtDSLYSCSDDQHIVEWSVVS 145
           8***********88899*******9998676655 PP

Organism

Petromyzon marinus

Protein Sequence
(Fasta)

MAASAVAVCA YSSDPAKCFA VASPDGRVYV WDASSGALRH EYAPSSHLSA TCSCLSWGPP 60
RKCKDAPQRK KRRSETTGRL AELDLLAMGT AVGSVLLYST VKGELHSKLD GGHDGRVNCV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCCCAACAC GTGGAAGAAG GAGAAGCAAT GGCGGCGTCG GCGGTGGCGG TGTGCGCCTA 60
CTCCTCGGAC CCCGCGAAAT GCTTTGCCGT CGCGTCGCCC GATGGCCGCG TGTACGTGTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0853--WD repeat

Interpro

IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0001525--P:angiogenesis
GO:0048703--P:embryonic viscerocranium morphogenesis
GO:0060218--P:hematopoietic stem cell differentiation
GO:0042254--P:ribosome biogenesis
GO:0001570--P:vasculogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	52.37	0.00e+00	633.00
IUUC-Atr-002533	Amborella trichopoda	22.35	1.00e-26	113.00
IUUC-Apl-003242	Anas platyrhynchos	53.37	1.00e-177	614.00
IUUC-Aca-004607	Anolis carolinensis	52.51	0.00e+00	655.00
IUUC-Aly-006074	Arabidopsis lyrata	26.64	6.00e-15	74.30
IUUC-Ath-007222	Arabidopsis thaliana	26.64	6.00e-15	74.30
IUUC-Ame-011014	Astyanax mexicanus	48.39	4.00e-157	546.00
IUUC-Bta-012605	Bos taurus	52.37	0.00e+00	632.00
IUUC-Bdi-014072	Brachypodium distachyon	20.99	1.00e-21	96.70
IUUC-Bol-016255	Brassica oleracea	21.98	2.00e-23	102.00
IUUC-Bra-017484	Brassica rapa	27.63	8.00e-22	97.10
IUUC-Cja-019620	Callithrix jacchus	52.52	0.00e+00	637.00
IUUC-Cfa-020520	Canis familiaris	51.86	0.00e+00	627.00
IUUC-Cpo-022456	Cavia porcellus	51.19	2.00e-175	607.00
IUUC-Cho-024726	Choloepus hoffmanni	52.20	1.00e-176	611.00
IUUC-Cin-025761	Ciona intestinalis	35.70	2.00e-100	358.00
IUUC-Dre-028051	Danio rerio	47.71	4.00e-155	540.00
IUUC-Dno-030031	Dasypus novemcinctus	52.68	0.00e+00	643.00
IUUC-Dme-031653	Drosophila melanogaster	24.57	8.00e-45	173.00
IUUC-Ete-032863	Echinops telfairi	61.54	2.00e-52	198.00
IUUC-Eca-033243	Equus caballus	52.39	1.00e-160	558.00
IUUC-Eeu-034970	Erinaceus europaeus	47.09	3.00e-127	447.00
IUUC-Fca-036009	Felis catus	52.03	0.00e+00	630.00
IUUC-Fal-037264	Ficedula albicollis	53.66	1.00e-172	597.00
IUUC-Gmo-039124	Gadus morhua	48.39	2.00e-160	557.00
IUUC-Gga-040862	Gallus gallus	52.12	0.00e+00	649.00
IUUC-Gac-041468	Gasterosteus aculeatus	49.83	1.00e-166	578.00
IUUC-Gma-042795	Glycine max	21.39	6.00e-16	77.80
IUUC-Ggo-044432	Gorilla gorilla	52.68	0.00e+00	637.00
IUUC-Hsa-047036	Homo sapiens	52.68	0.00e+00	637.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	52.01	0.00e+00	625.00
IUUC-Lch-049553	Latimeria chalumnae	54.75	2.00e-180	624.00
IUUC-Laf-053462	Loxodonta africana	52.12	0.00e+00	647.00
IUUC-Mcc-055239	Macaca mulatta	52.35	0.00e+00	633.00
IUUC-Mtr-057977	Medicago truncatula	21.69	5.00e-18	84.30
IUUC-Mga-060079	Meleagris gallopavo	53.00	3.00e-173	600.00
IUUC-Mmr-061472	Microcebus murinus	52.60	0.00e+00	634.00
IUUC-Mdo-061972	Monodelphis domestica	51.02	0.00e+00	639.00
IUUC-Mmu-063354	Mus musculus	52.18	2.00e-180	624.00
IUUC-Mac-065064	Musa acuminata	26.48	2.00e-19	88.60
IUUC-Mpu-066877	Mustela putorius furo	52.71	0.00e+00	634.00
IUUC-Mlu-067476	Myotis lucifugus	50.08	1.00e-174	605.00
IUUC-Nle-069119	Nomascus leucogenys	52.68	0.00e+00	638.00
IUUC-Ont-072093	Oreochromis niloticus	49.41	1.00e-174	604.00
IUUC-Oan-072944	Ornithorhynchus anatinus	51.12	2.00e-167	580.00
IUUC-Ocu-074472	Oryctolagus cuniculus	52.18	4.00e-178	616.00
IUUC-Oba-075009	Oryza barthii	20.37	4.00e-19	88.60
IUUC-Ogl-077189	Oryza glaberrima	20.75	1.00e-21	96.70
IUUC-Oin-079064	Oryza indica	20.54	1.00e-19	90.10
IUUC-Opu-083604	Oryza punctata	21.06	3.00e-21	95.10
IUUC-Oru-084620	Oryza rufipogon	20.78	3.00e-19	88.60
IUUC-Osa-085345	Oryza sativa	20.78	1.00e-19	89.70
IUUC-Ola-086626	Oryzias latipes	49.07	4.00e-172	596.00
IUUC-Oga-087911	Otolemur garnettii	52.68	0.00e+00	627.00
IUUC-Ptr-091603	Pan troglodytes	52.85	0.00e+00	638.00
IUUC-Pan-092569	Papio anubis	52.35	0.00e+00	633.00
IUUC-Ppa-095327	Physcomitrella patens	24.78	1.00e-24	107.00
IUUC-Pfo-097292	Poecilia formosa	48.83	3.00e-164	570.00
IUUC-Pab-097878	Pongo abelii	52.52	0.00e+00	635.00
IUUC-Pop-099418	Populus trichocarpa	21.15	1.00e-15	76.60
IUUC-Pca-100941	Procavia capensis	49.39	2.00e-164	571.00
IUUC-Ppe-101779	Prunus persica	21.64	2.00e-24	105.00
IUUC-Pva-102493	Pteropus vampyrus	47.12	1.00e-160	558.00
IUUC-Rno-105084	Rattus norvegicus	51.34	3.00e-174	603.00
IUUC-Sha-107486	Sarcophilus harrisii	51.86	0.00e+00	644.00
IUUC-Smo-108825	Selaginella moellendorffii	23.43	3.00e-27	115.00
IUUC-Sit-110825	Setaria italica	20.48	7.00e-17	80.90
IUUC-Sly-111365	Solanum lycopersicum	21.94	4.00e-20	91.70
IUUC-Stu-112812	Solanum tuberosum	21.63	1.00e-17	83.20
IUUC-Sar-113326	Sorex araneus	63.20	1.00e-89	322.00
IUUC-Sbi-114426	Sorghum bicolor	21.12	1.00e-21	96.70
IUUC-Tgu-116726	Taeniopygia guttata	52.31	0.00e+00	645.00
IUUC-Tru-117848	Takifugu rubripes	49.58	3.00e-170	590.00
IUUC-Tsy-119091	Tarsius syrichta	39.44	1.00e-76	278.00
IUUC-Tni-120591	Tetraodon nigroviridis	49.83	1.00e-166	578.00
IUUC-Tca-121576	Theobroma cacao	21.22	4.00e-18	84.70
IUUC-Tae-125105	Triticum aestivum	20.26	6.00e-20	90.90
IUUC-Tbe-127832	Tupaia belangeri	52.52	3.00e-164	570.00
IUUC-Ttr-128812	Tursiops truncatus	52.72	1.00e-164	571.00
IUUC-Xma-133557	Xiphophorus maculatus	49.32	3.00e-165	573.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence