iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Ola-086949

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

BAAF04096393

Gene Name

trim8b (1 of many); trim8

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSORLG00000010965.1	ENSORLT00000013753.1	ENSORLP00000013752.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.50e-06	28.5	11	78
E3 activity/RING/RING	1.00e-07	32.7	15	56

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 4    eeflCpIslelMrdPvvlpsGitydrssIekwlasggk..tcPvtrqpl.teedlvPnltlrrliqaw 68
           ee++CpI l +++dP  lp+ + + r +I +  a++ +   cP +++   ++ +l  n+ l ++++++
   Q: 11   EELICPICLHVFSDPIQLPCKHNFCRGCISEAWAKDSTlaRCPECNHAYtQKPSLEKNHKLSNIVEKY 78
           799**************************77666666668*******99445588******9999987 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadCl.qkwpglknssskefrCPlCr 46
           C+iCl  f+d p+ lpC+H f++ C+ ++w     + s+ +rCP C+
   Q: 15   CPICLHVFSD-PIQLPCKHNFCRGCIsEAW----AKDSTLARCPECN 56
           **********.9******************....889*********7 PP

Organism

Oryzias latipes

Protein Sequence
(Fasta)

MAETWRNCFE EELICPICLH VFSDPIQLPC KHNFCRGCIS EAWAKDSTLA RCPECNHAYT 60
QKPSLEKNHK LSNIVEKYNA LSVEKATTPA LQCILCRRGP PLPAVKVCLR CNAPCCQSHV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTGAGA CGTGGAGGAA CTGTTTTGAG GAGGAGCTCA TCTGTCCCAT CTGTCTGCAC 60
GTGTTCTCGG ATCCCATCCA GCTGCCCTGC AAGCACAACT TCTGCAGGGG CTGCATCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001258	Ailuropoda melanoleuca	60.49	0.00e+00	662.00
IUUC-Apl-004223	Anas platyrhynchos	61.18	0.00e+00	659.00
IUUC-Aca-005106	Anolis carolinensis	59.90	0.00e+00	667.00
IUUC-Ame-011348	Astyanax mexicanus	65.80	0.00e+00	713.00
IUUC-Bta-012787	Bos taurus	60.76	0.00e+00	667.00
IUUC-Bdi-014581	Brachypodium distachyon	40.54	5.00e-07	48.90
IUUC-Cja-019471	Callithrix jacchus	60.59	0.00e+00	665.00
IUUC-Cfa-020052	Canis familiaris	60.59	0.00e+00	667.00
IUUC-Cpo-022491	Cavia porcellus	52.59	7.00e-101	360.00
IUUC-Csa-023544	Chlorocebus sabaeus	60.76	0.00e+00	665.00
IUUC-Dre-028013	Danio rerio	64.69	0.00e+00	738.00
IUUC-Dno-029676	Dasypus novemcinctus	60.24	0.00e+00	662.00
IUUC-Dor-030402	Dipodomys ordii	60.17	0.00e+00	665.00
IUUC-Ete-033188	Echinops telfairi	55.36	2.00e-168	585.00
IUUC-Eca-033524	Equus caballus	60.31	0.00e+00	654.00
IUUC-Eeu-034979	Erinaceus europaeus	76.04	1.00e-86	313.00
IUUC-Fca-036362	Felis catus	60.59	0.00e+00	662.00
IUUC-Fal-036652	Ficedula albicollis	60.62	0.00e+00	644.00
IUUC-Gmo-039405	Gadus morhua	85.99	0.00e+00	897.00
IUUC-Gga-040813	Gallus gallus	61.28	0.00e+00	665.00
IUUC-Gac-041792	Gasterosteus aculeatus	88.44	0.00e+00	895.00
IUUC-Ggo-044962	Gorilla gorilla	60.59	0.00e+00	662.00
IUUC-Hsa-046158	Homo sapiens	60.59	0.00e+00	663.00
IUUC-Itr-048118	Ictidomys tridecemlineatus	60.42	0.00e+00	664.00
IUUC-Lch-049433	Latimeria chalumnae	59.58	0.00e+00	653.00
IUUC-Loc-052026	Lepisosteus oculatus	69.04	0.00e+00	759.00
IUUC-Laf-054159	Loxodonta africana	56.56	1.00e-140	492.00
IUUC-Mcc-055490	Macaca mulatta	60.76	0.00e+00	665.00
IUUC-Meu-056549	Macropus eugenii	54.84	3.00e-119	421.00
IUUC-Mga-059334	Meleagris gallopavo	61.28	0.00e+00	660.00
IUUC-Mmr-061672	Microcebus murinus	60.59	0.00e+00	665.00
IUUC-Mdo-061849	Monodelphis domestica	57.44	8.00e-159	553.00
IUUC-Mmu-063537	Mus musculus	60.59	0.00e+00	667.00
IUUC-Mpu-065762	Mustela putorius furo	60.76	0.00e+00	667.00
IUUC-Mlu-066979	Myotis lucifugus	51.33	3.00e-103	368.00
IUUC-Nle-069419	Nomascus leucogenys	60.59	0.00e+00	662.00
IUUC-Opr-070981	Ochotona princeps	60.76	0.00e+00	669.00
IUUC-Ont-072053	Oreochromis niloticus	90.07	0.00e+00	860.00
IUUC-Oan-073608	Ornithorhynchus anatinus	57.32	1.00e-143	503.00
IUUC-Ocu-074694	Oryctolagus cuniculus	60.34	0.00e+00	663.00
IUUC-Oin-080164	Oryza indica	40.85	4.00e-07	48.10
IUUC-Opu-083277	Oryza punctata	39.19	1.00e-06	47.80
IUUC-Oga-089175	Otolemur garnettii	60.76	0.00e+00	666.00
IUUC-Oar-089591	Ovis aries	54.39	1.00e-151	529.00
IUUC-Ptr-091309	Pan troglodytes	59.72	0.00e+00	634.00
IUUC-Pan-091903	Papio anubis	60.76	0.00e+00	665.00
IUUC-Psi-093293	Pelodiscus sinensis	58.97	0.00e+00	636.00
IUUC-Pfo-097191	Poecilia formosa	92.31	0.00e+00	880.00
IUUC-Pab-098251	Pongo abelii	58.85	0.00e+00	627.00
IUUC-Pca-100504	Procavia capensis	60.94	0.00e+00	668.00
IUUC-Pva-102320	Pteropus vampyrus	60.24	0.00e+00	662.00
IUUC-Rno-105545	Rattus norvegicus	60.76	0.00e+00	669.00
IUUC-Ssc-116121	Sus scrofa	60.76	0.00e+00	667.00
IUUC-Tgu-116724	Taeniopygia guttata	61.28	0.00e+00	658.00
IUUC-Tru-118048	Takifugu rubripes	88.45	0.00e+00	864.00
IUUC-Tni-120856	Tetraodon nigroviridis	84.21	0.00e+00	800.00
IUUC-Tbe-127400	Tupaia belangeri	52.01	3.00e-82	298.00
IUUC-Ttr-128233	Tursiops truncatus	60.42	0.00e+00	647.00
IUUC-Xtr-132578	Xenopus tropicalis	59.86	0.00e+00	659.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence