iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cme-027312

Ensembl Protein ID

CMM012CT

UniProt Accession

M1VDM9; M1VDM9_CYAM1

Genbank Protein ID

BAM80912.1

Protein Name

Ring finger protein

Genbank Nucleotide ID

AP006495

Gene Name

CYME_CMM012C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CMM012C	CMM012CT	CMM012CT

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.90e-07	29.0	292	334

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+ +   ++ + lpCgH+fh+ C+ +w     +     +CP Cr
   Q: 292  CTICLSQYepAEEIRKLPCGHHFHRACVDQW-----LLFFDKSCPQCR 334
           9***998877555******************.....455566799997 PP

Organism

Cyanidioschyzon merolae

Protein Sequence
(Fasta)

MEFRETIRQQ LQYGEATPLV MSSSIAAGSQ NGGIGARLLR SDSRQVRTHV HERVRTDLMP 60
WTRKLSFAAS FLEVLVEAAV LLLTRNQPCD APLKLWIGVL IALQTASIVL RLLGSVYSRV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGAGTTTA GGGAAACGAT TAGGCAGCAG CTTCAGTACG GTGAAGCAAC GCCGCTCGTT 60
ATGAGTTCCT CGATCGCTGC AGGATCCCAG AATGGGGGCA TTGGTGCACG CCTTCTTCGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001841--Znf_RING
IPR011016--Znf_RING-CH
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING
SM00744--RINGv

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

cme:CYME_CMM012C

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000618	Aegilops tauschii	28.73	4.00e-22	97.10
IUUC-Aml-001378	Ailuropoda melanoleuca	58.33	3.00e-12	65.10
IUUC-Atr-002558	Amborella trichopoda	24.24	2.00e-17	81.30
IUUC-Apl-003634	Anas platyrhynchos	58.33	2.00e-12	65.50
IUUC-Aca-005299	Anolis carolinensis	49.25	7.00e-13	65.50
IUUC-Aly-005824	Arabidopsis lyrata	26.07	2.00e-19	87.80
IUUC-Ath-007421	Arabidopsis thaliana	26.07	6.00e-20	89.40
IUUC-Acl-008067	Aspergillus clavatus	56.52	7.00e-11	60.50
IUUC-Afl-008676	Aspergillus flavus	59.09	6.00e-11	60.80
IUUC-Afu-009114	Aspergillus fumigatus	59.09	1.00e-10	59.70
IUUC-Ani-009491	Aspergillus nidulans	59.09	1.00e-10	59.70
IUUC-Ang-009544	Aspergillus niger	61.36	3.00e-11	61.60
IUUC-Aor-010095	Aspergillus oryzae	59.09	2.00e-11	60.10
IUUC-Ate-010250	Aspergillus terreus	61.36	3.00e-11	61.60
IUUC-Ame-011948	Astyanax mexicanus	53.45	1.00e-12	65.10
IUUC-Bgr-012220	Blumeria graminis	46.67	7.00e-09	52.80
IUUC-Bta-012823	Bos taurus	58.33	3.00e-12	65.10
IUUC-Bdi-014235	Brachypodium distachyon	26.64	8.00e-29	118.00
IUUC-Bol-015448	Brassica oleracea	29.56	1.00e-20	91.30
IUUC-Bra-017950	Brassica rapa	30.05	1.00e-20	91.70
IUUC-Cja-019798	Callithrix jacchus	49.23	1.00e-13	67.80
IUUC-Cfa-021062	Canis familiaris	58.33	3.00e-12	65.10
IUUC-Cpo-022225	Cavia porcellus	49.23	2.00e-13	67.80
IUUC-Csa-024018	Chlorocebus sabaeus	49.23	2.00e-13	67.40
IUUC-Cho-024278	Choloepus hoffmanni	58.33	3.00e-12	65.10
IUUC-Cin-025552	Ciona intestinalis	33.98	8.00e-14	67.40
IUUC-Cne-026985	Cryptococcus neoformans	52.17	1.00e-11	63.20
IUUC-Dre-028323	Danio rerio	60.42	3.00e-12	65.50
IUUC-Dno-029962	Dasypus novemcinctus	57.45	8.00e-12	62.00
IUUC-Dor-030791	Dipodomys ordii	36.67	2.00e-12	63.90
IUUC-Dse-031214	Dothistroma septosporum	47.92	1.00e-11	62.40
IUUC-Dme-032142	Drosophila melanogaster	29.93	7.00e-13	66.60
IUUC-Ete-032985	Echinops telfairi	58.33	3.00e-12	65.10
IUUC-Eca-033659	Equus caballus	58.33	3.00e-12	65.50
IUUC-Eeu-034773	Erinaceus europaeus	58.33	4.00e-12	64.30
IUUC-Fca-035560	Felis catus	58.33	3.00e-12	65.50
IUUC-Fal-037200	Ficedula albicollis	52.54	4.00e-13	66.20
IUUC-Fox-037754	Fusarium oxysporum	43.40	1.00e-11	60.50
IUUC-Gmo-038696	Gadus morhua	60.42	2.00e-12	65.50
IUUC-Gga-040900	Gallus gallus	58.33	2.00e-12	65.50
IUUC-Gac-041830	Gasterosteus aculeatus	60.42	3.00e-12	65.10
IUUC-Gma-043870	Glycine max	26.49	2.00e-24	103.00
IUUC-Ggo-044631	Gorilla gorilla	49.23	9.00e-14	68.20
IUUC-Hsa-046864	Homo sapiens	49.23	1.00e-13	68.20
IUUC-Hvu-047833	Hordeum vulgare	25.17	6.00e-24	102.00
IUUC-Itr-048602	Ictidomys tridecemlineatus	49.23	2.00e-13	67.40
IUUC-Lch-049512	Latimeria chalumnae	55.77	2.00e-12	65.90
IUUC-Lpe-050720	Leersia perrieri	25.08	5.00e-24	102.00
IUUC-Loc-052174	Lepisosteus oculatus	58.33	1.00e-11	63.20
IUUC-Lma-053286	Leptosphaeria maculans	43.64	2.00e-11	61.20
IUUC-Laf-053804	Loxodonta africana	58.33	2.00e-12	65.90
IUUC-Mcc-055198	Macaca mulatta	49.23	1.00e-13	67.80
IUUC-Meu-056052	Macropus eugenii	58.33	5.00e-12	64.30
IUUC-Mor-056917	Magnaporthe oryzae	30.28	1.00e-11	62.00
IUUC-Mpo-057522	Magnaporthe poae	43.48	3.00e-10	57.80
IUUC-Mtr-058402	Medicago truncatula	25.22	8.00e-18	82.40
IUUC-Mga-059245	Meleagris gallopavo	50.00	2.00e-13	65.50
IUUC-Mvi-060247	Microbotryum violaceum	43.75	6.00e-10	57.00
IUUC-Mmr-061389	Microcebus murinus	56.25	6.00e-12	62.40
IUUC-Mdo-061958	Monodelphis domestica	58.33	3.00e-12	65.10
IUUC-Mmu-063102	Mus musculus	49.23	1.00e-13	68.60
IUUC-Mac-064720	Musa acuminata	28.57	4.00e-22	96.30
IUUC-Mpu-066793	Mustela putorius furo	56.25	7.00e-12	62.00
IUUC-Mlu-067464	Myotis lucifugus	56.00	9.00e-11	60.50
IUUC-Nfi-068528	Neosartorya fischeri	61.36	3.00e-11	61.60
IUUC-Nle-069235	Nomascus leucogenys	49.23	2.00e-13	67.40
IUUC-Opr-070646	Ochotona princeps	56.25	8.00e-12	62.00
IUUC-Ont-072297	Oreochromis niloticus	60.42	3.00e-12	65.10
IUUC-Ocu-074718	Oryctolagus cuniculus	49.23	1.00e-13	68.20
IUUC-Oba-075466	Oryza barthii	26.44	6.00e-26	109.00
IUUC-Obr-076276	Oryza brachyantha	24.25	9.00e-23	98.60
IUUC-Ogl-076994	Oryza glaberrima	26.44	6.00e-26	109.00
IUUC-Ogu-078200	Oryza glumaepatula	26.44	6.00e-26	109.00
IUUC-Oin-079508	Oryza indica	26.44	6.00e-26	109.00
IUUC-Olo-080855	Oryza longistaminata	26.44	1.00e-25	108.00
IUUC-Ome-081841	Oryza meridionalis	26.44	5.00e-26	109.00
IUUC-Oni-082470	Oryza nivara	26.44	4.00e-26	109.00
IUUC-Opu-083790	Oryza punctata	24.70	2.00e-25	107.00
IUUC-Oru-085181	Oryza rufipogon	26.44	6.00e-26	109.00
IUUC-Osa-086143	Oryza sativa	26.44	8.00e-26	108.00
IUUC-Ola-087455	Oryzias latipes	52.24	5.00e-15	74.30
IUUC-Oga-087993	Otolemur garnettii	49.23	9.00e-14	68.60
IUUC-Oar-090286	Ovis aries	58.33	3.00e-12	65.10
IUUC-Ptr-091341	Pan troglodytes	49.23	1.00e-13	68.20
IUUC-Pan-091775	Papio anubis	49.23	1.00e-13	68.20
IUUC-Psi-093662	Pelodiscus sinensis	58.33	2.00e-12	65.90
IUUC-Pma-094624	Petromyzon marinus	55.77	8.00e-12	63.50
IUUC-Pno-094874	Phaeosphaeria nodorum	47.83	5.00e-11	60.10
IUUC-Ppa-095745	Physcomitrella patens	26.52	4.00e-17	80.10
IUUC-Pfo-096611	Poecilia formosa	60.42	5.00e-12	64.70
IUUC-Pab-097885	Pongo abelii	58.33	2.00e-12	65.50
IUUC-Pop-098969	Populus trichocarpa	24.33	5.00e-19	86.70
IUUC-Pca-100561	Procavia capensis	58.33	2.00e-12	65.90
IUUC-Ppe-102005	Prunus persica	28.00	1.00e-23	101.00
IUUC-Pva-102801	Pteropus vampyrus	47.69	4.00e-13	66.60
IUUC-Ptt-103733	Puccinia triticina	43.40	3.00e-09	53.50
IUUC-Pte-104044	Pyrenophora teres	36.11	2.00e-11	61.20
IUUC-Pyt-104819	Pyrenophora triticirepentis	47.83	8.00e-11	59.70
IUUC-Rno-105973	Rattus norvegicus	49.23	1.00e-13	68.20
IUUC-Sce-106282	Saccharomyces cerevisiae	32.26	2.00e-05	41.20
IUUC-Sha-107401	Sarcophilus harrisii	58.33	3.00e-12	65.10
IUUC-Spo-108030	Schizosaccharomyces pombe	49.06	9.00e-11	59.30
IUUC-Smo-109080	Selaginella moellendorffii	25.17	7.00e-16	75.90
IUUC-Sit-110501	Setaria italica	28.98	4.00e-18	83.20
IUUC-Sly-111398	Solanum lycopersicum	25.00	1.00e-18	85.50
IUUC-Stu-112010	Solanum tuberosum	25.54	3.00e-19	87.00
IUUC-Sar-113383	Sorex araneus	56.25	9.00e-12	62.00
IUUC-Sbi-113914	Sorghum bicolor	26.18	7.00e-18	82.40
IUUC-Ssc-116436	Sus scrofa	58.33	2.00e-12	65.50
IUUC-Tgu-117345	Taeniopygia guttata	52.54	4.00e-13	66.20
IUUC-Tru-118054	Takifugu rubripes	55.77	4.00e-12	64.70
IUUC-Tsy-119333	Tarsius syrichta	35.56	3.00e-12	63.50
IUUC-Tni-120063	Tetraodon nigroviridis	58.33	7.00e-12	63.90
IUUC-Tca-121516	Theobroma cacao	26.45	7.00e-26	108.00
IUUC-Tre-121978	Trichoderma reesei	43.48	3.00e-10	57.80
IUUC-Tae-124800	Triticum aestivum	30.11	2.00e-22	97.40
IUUC-Tur-126522	Triticum urartu	45.28	1.00e-11	62.40
IUUC-Tbe-127859	Tupaia belangeri	36.67	2.00e-12	64.30
IUUC-Ttr-128623	Tursiops truncatus	58.33	3.00e-12	65.50
IUUC-Vda-129899	Verticillium dahliae	43.48	8.00e-11	59.30
IUUC-Vpa-130662	Vicugna pacos	58.33	2.00e-12	65.50
IUUC-Vvi-131276	Vitis vinifera	29.02	1.00e-18	85.50
IUUC-Xtr-132963	Xenopus tropicalis	59.57	2.00e-12	65.90
IUUC-Yli-134336	Yarrowia lipolytica	51.16	2.00e-10	58.50
IUUC-Zma-135151	Zea mays	29.83	1.00e-23	101.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence