iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021327

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02022012

Gene Name

TMF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000013302.3	ENSCPOT00000013432.2	ENSCPOP00000011976.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 adaptor/Cullin RING/ECS/SOCS_VHL_BC-box	90.56	0.00e+00	1594.00	IUUC-Hsa-046889

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Cavia porcellus

Protein Sequence
(Fasta)

MSWFNASQLS SFAKQALSQA QKSIDRVLDI QEEEPSAWVE TIPYGEPGIS SPVSGGWDTS 60
TWGLKSNTEP QSPPTTSPKA ITKPVRRTVV DESENFFSAF LSPADVQTIQ KSPVVSKPPA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGCTGGT TCAACGCTTC CCAGCTCTCC AGTTTCGCCA AACAGGCCCT GTCCCAGGCC 60
CAGAAGTCCA TCGACAGGGT CCTGGACATC CAGGAGGAGG AGCCGAGCGC CTGGGTGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR022092--TMF_DNA-bd
IPR022091--TMF_TATA-bd

Pfam

PF12329--TMF_DNA_bd
PF12325--TMF_TATA_bd

Gene Ontology

GO:0005783--C:endoplasmic reticulum
GO:0005794--C:Golgi apparatus
GO:0001675--P:acrosome assembly
GO:0071407--P:cellular response to organic cyclic compound
GO:0042742--P:defense response to bacterium
GO:0030317--P:flagellated sperm motility
GO:0033327--P:Leydig cell differentiation
GO:0032275--P:luteinizing hormone secretion
GO:0043066--P:negative regulation of apoptotic process
GO:0010629--P:negative regulation of gene expression
GO:0001819--P:positive regulation of cytokine production
GO:2000845--P:positive regulation of testosterone secretion
GO:0061136--P:regulation of proteasomal protein catabolic process
GO:0007289--P:spermatid nucleus differentiation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000973	Aegilops tauschii	28.41	3.00e-26	114.00
IUUC-Aml-001448	Ailuropoda melanoleuca	88.93	0.00e+00	1630.00
IUUC-Atr-003092	Amborella trichopoda	31.56	5.00e-38	153.00
IUUC-Apl-003546	Anas platyrhynchos	73.45	0.00e+00	1273.00
IUUC-Aca-004234	Anolis carolinensis	70.42	0.00e+00	1270.00
IUUC-Ath-007364	Arabidopsis thaliana	29.82	6.00e-36	146.00
IUUC-Acl-008271	Aspergillus clavatus	29.32	3.00e-12	67.40
IUUC-Afl-008405	Aspergillus flavus	27.45	9.00e-08	52.40
IUUC-Afu-009059	Aspergillus fumigatus	28.57	4.00e-12	67.00
IUUC-Ani-009416	Aspergillus nidulans	28.65	1.00e-11	65.50
IUUC-Ang-009857	Aspergillus niger	28.97	4.00e-11	63.50
IUUC-Aor-009910	Aspergillus oryzae	27.45	9.00e-08	52.40
IUUC-Ate-010427	Aspergillus terreus	32.74	6.00e-09	56.20
IUUC-Ame-011270	Astyanax mexicanus	66.41	0.00e+00	903.00
IUUC-Bgr-012100	Blumeria graminis	23.98	1.00e-10	62.40
IUUC-Bta-012337	Bos taurus	89.94	0.00e+00	1620.00
IUUC-Bci-013775	Botrytis cinerea	30.77	7.00e-06	46.20
IUUC-Bdi-014582	Brachypodium distachyon	30.31	1.00e-32	135.00
IUUC-Cel-018635	Caenorhabditis elegans	31.71	5.70e-01	28.50
IUUC-Cja-019803	Callithrix jacchus	90.19	0.00e+00	1652.00
IUUC-Cfa-020451	Canis familiaris	89.15	0.00e+00	1598.00
IUUC-Csa-023803	Chlorocebus sabaeus	90.65	0.00e+00	1654.00
IUUC-Cho-024293	Choloepus hoffmanni	84.19	0.00e+00	683.00
IUUC-Cin-025461	Ciona intestinalis	40.67	2.00e-39	156.00
IUUC-Cgl-026669	Colletotrichum gloeosporioides	30.48	3.00e-08	54.30
IUUC-Cme-027311	Cyanidioschyzon merolae	32.45	1.00e-03	38.50
IUUC-Dre-028098	Danio rerio	59.39	0.00e+00	975.00
IUUC-Dno-029535	Dasypus novemcinctus	88.73	0.00e+00	1578.00
IUUC-Dor-031120	Dipodomys ordii	86.07	0.00e+00	1604.00
IUUC-Dse-031548	Dothistroma septosporum	31.42	3.00e-08	53.50
IUUC-Dme-031658	Drosophila melanogaster	30.66	8.00e-22	99.40
IUUC-Ete-032764	Echinops telfairi	81.62	0.00e+00	1041.00
IUUC-Eca-034312	Equus caballus	90.20	0.00e+00	1597.00
IUUC-Eeu-034967	Erinaceus europaeus	81.84	0.00e+00	942.00
IUUC-Fca-036312	Felis catus	89.83	0.00e+00	1637.00
IUUC-Fal-036979	Ficedula albicollis	72.95	0.00e+00	1192.00
IUUC-Fox-037833	Fusarium oxysporum	29.64	2.00e-06	48.50
IUUC-Gmo-039175	Gadus morhua	66.98	0.00e+00	707.00
IUUC-Ggr-039752	Gaeumannomyces graminis	32.74	2.00e-10	61.60
IUUC-Gga-041252	Gallus gallus	73.73	0.00e+00	1290.00
IUUC-Gac-042186	Gasterosteus aculeatus	68.38	0.00e+00	679.00
IUUC-Gma-042878	Glycine max	30.98	2.00e-24	107.00
IUUC-Ggo-045127	Gorilla gorilla	89.92	0.00e+00	1638.00
IUUC-Hsa-046889	Homo sapiens	90.56	0.00e+00	1655.00
IUUC-Hvu-047231	Hordeum vulgare	41.00	9.00e-10	59.30
IUUC-Itr-048895	Ictidomys tridecemlineatus	82.40	0.00e+00	1332.00
IUUC-Kpa-049375	Komagataella pastoris	34.65	4.00e-08	53.50
IUUC-Lch-049701	Latimeria chalumnae	67.97	0.00e+00	1172.00
IUUC-Lpe-051071	Leersia perrieri	30.36	1.00e-15	79.00
IUUC-Loc-052900	Lepisosteus oculatus	70.29	0.00e+00	981.00
IUUC-Lma-053189	Leptosphaeria maculans	25.63	3.00e-16	80.90
IUUC-Laf-054583	Loxodonta africana	88.45	0.00e+00	1519.00
IUUC-Meu-056215	Macropus eugenii	68.95	1.00e-115	410.00
IUUC-Mor-057227	Magnaporthe oryzae	26.27	9.00e-08	52.40
IUUC-Mpo-057315	Magnaporthe poae	42.31	8.00e-07	49.30
IUUC-Mtr-058276	Medicago truncatula	26.49	1.00e-20	95.50
IUUC-Mga-059916	Meleagris gallopavo	73.92	0.00e+00	1233.00
IUUC-Mmr-061789	Microcebus murinus	78.79	0.00e+00	1147.00
IUUC-Mdo-062174	Monodelphis domestica	79.24	0.00e+00	1423.00
IUUC-Mmu-063422	Mus musculus	84.54	0.00e+00	1467.00
IUUC-Mac-065498	Musa acuminata	41.84	2.00e-06	48.50
IUUC-Mpu-065744	Mustela putorius furo	89.09	0.00e+00	1672.00
IUUC-Mlu-066925	Myotis lucifugus	87.18	0.00e+00	1488.00
IUUC-Nfi-068254	Neosartorya fischeri	28.57	2.00e-12	68.20
IUUC-Ncr-068887	Neurospora crassa	25.24	2.00e-10	61.60
IUUC-Nle-070100	Nomascus leucogenys	90.47	0.00e+00	1652.00
IUUC-Opr-071131	Ochotona princeps	82.27	0.00e+00	1145.00
IUUC-Ont-071378	Oreochromis niloticus	61.81	0.00e+00	982.00
IUUC-Oan-073705	Ornithorhynchus anatinus	79.11	0.00e+00	1478.00
IUUC-Ocu-074158	Oryctolagus cuniculus	89.32	0.00e+00	1674.00
IUUC-Oba-075498	Oryza barthii	30.36	1.00e-16	82.40
IUUC-Obr-076136	Oryza brachyantha	31.73	3.00e-30	127.00
IUUC-Ogl-077020	Oryza glaberrima	33.16	4.00e-24	107.00
IUUC-Ogu-078875	Oryza glumaepatula	30.87	1.00e-19	92.00
IUUC-Oin-079223	Oryza indica	33.16	5.00e-24	106.00
IUUC-Olo-080859	Oryza longistaminata	30.27	8.00e-17	82.80
IUUC-Ome-081621	Oryza meridionalis	30.10	9.00e-17	82.80
IUUC-Oni-082628	Oryza nivara	30.36	3.00e-16	80.90
IUUC-Opu-083825	Oryza punctata	30.87	3.00e-19	90.90
IUUC-Oru-084959	Oryza rufipogon	30.10	7.00e-16	79.70
IUUC-Osa-086104	Oryza sativa	33.16	5.00e-24	107.00
IUUC-Ola-087148	Oryzias latipes	58.97	0.00e+00	1008.00
IUUC-Olu-087856	Ostreococcus lucimarinus	33.06	9.00e-15	75.50
IUUC-Oga-088598	Otolemur garnettii	87.81	0.00e+00	1606.00
IUUC-Oar-090450	Ovis aries	88.86	0.00e+00	1594.00
IUUC-Ptr-091659	Pan troglodytes	90.38	0.00e+00	1649.00
IUUC-Pan-091964	Papio anubis	74.45	0.00e+00	1302.00
IUUC-Psi-093585	Pelodiscus sinensis	78.74	0.00e+00	972.00
IUUC-Pma-094379	Petromyzon marinus	49.01	0.00e+00	715.00
IUUC-Pno-095032	Phaeosphaeria nodorum	30.88	4.00e-09	57.00
IUUC-Ppa-095425	Physcomitrella patens	31.05	7.00e-51	195.00
IUUC-Pfo-096386	Poecilia formosa	66.00	0.00e+00	870.00
IUUC-Pab-098042	Pongo abelii	85.59	0.00e+00	832.00
IUUC-Pop-099005	Populus trichocarpa	28.31	2.00e-14	73.60
IUUC-Pca-100308	Procavia capensis	90.40	0.00e+00	1162.00
IUUC-Ppe-101449	Prunus persica	31.89	4.00e-24	107.00
IUUC-Pva-103119	Pteropus vampyrus	84.29	0.00e+00	1133.00
IUUC-Pte-104335	Pyrenophora teres	26.62	1.00e-09	58.90
IUUC-Pyt-104547	Pyrenophora triticirepentis	27.27	1.00e-10	62.40
IUUC-Rno-105578	Rattus norvegicus	84.81	0.00e+00	1444.00
IUUC-Sha-106612	Sarcophilus harrisii	78.63	0.00e+00	1361.00
IUUC-Sja-107911	Schizosaccharomyces japonicus	35.71	6.00e-03	35.80
IUUC-Spo-108059	Schizosaccharomyces pombe	29.57	5.00e-08	52.80
IUUC-Ssl-108390	Sclerotinia sclerotiorum	29.24	7.00e-08	52.80
IUUC-Smo-108781	Selaginella moellendorffii	28.65	6.00e-16	78.20
IUUC-Sit-109754	Setaria italica	33.16	2.00e-23	104.00
IUUC-Sly-111573	Solanum lycopersicum	30.02	3.00e-33	137.00
IUUC-Stu-112843	Solanum tuberosum	26.51	1.90e-01	28.10
IUUC-Sar-113118	Sorex araneus	81.96	0.00e+00	1461.00
IUUC-Sbi-114519	Sorghum bicolor	31.57	1.00e-22	102.00
IUUC-Ssc-115826	Sus scrofa	84.98	0.00e+00	1499.00
IUUC-Tgu-116702	Taeniopygia guttata	73.63	0.00e+00	1205.00
IUUC-Tru-117915	Takifugu rubripes	65.80	0.00e+00	843.00
IUUC-Tsy-119224	Tarsius syrichta	90.38	0.00e+00	1634.00
IUUC-Tni-120157	Tetraodon nigroviridis	59.77	0.00e+00	926.00
IUUC-Tca-121361	Theobroma cacao	31.08	8.00e-20	92.00
IUUC-Tre-122066	Trichoderma reesei	31.58	7.00e-09	56.20
IUUC-Tvi-122562	Trichoderma virens	32.38	1.00e-08	55.80
IUUC-Tae-123602	Triticum aestivum	32.91	3.00e-20	94.40
IUUC-Tme-126895	Tuber melanosporum	26.34	5.00e-08	53.10
IUUC-Tbe-128074	Tupaia belangeri	83.04	0.00e+00	1221.00
IUUC-Ttr-128190	Tursiops truncatus	89.09	0.00e+00	1628.00
IUUC-Vda-129710	Verticillium dahliae	33.33	2.00e-10	61.60
IUUC-Vpa-130072	Vicugna pacos	89.07	0.00e+00	1488.00
IUUC-Vvi-130853	Vitis vinifera	35.04	3.00e-09	57.80
IUUC-Xtr-131969	Xenopus tropicalis	64.74	0.00e+00	1097.00
IUUC-Xma-133623	Xiphophorus maculatus	65.55	0.00e+00	907.00
IUUC-Yli-134550	Yarrowia lipolytica	25.30	4.00e-14	73.60

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence